| Definition | Synechococcus sp. RCC307, complete genome. |
|---|---|
| Accession | NC_009482 |
| Length | 2,224,914 |
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The map label for this gene is 148242034
Identifier: 148242034
GI number: 148242034
Start: 859318
End: 859632
Strand: Direct
Name: 148242034
Synonym: SynRCC307_0935
Alternate gene names: NA
Gene position: 859318-859632 (Clockwise)
Preceding gene: 148242031
Following gene: 148242035
Centisome position: 38.62
GC content: 60.63
Gene sequence:
>315_bases TTGCACCAGTGGCGCTCCGATCGGCATAAGGTTTCCAGCTCTCGCCAGTCTCAGATGGGTCTCGATGCACTCTTGAATGC GGCTCTGGGTGTTGCGCTCTCCAATGTCGCTGGATCGCAGCCTGCAGCTCCATGGGCAGGTGGTGCATCCCCGCTGGGTT CAGTGGCGCCTGTATTGGGGGAGTTGGTGCGGCAACTGCCCAGGCAGTCCCCAGTTCCTCAGCAGGTTTCGGCGCTGCAG GAGGTGGTGATGGATTCCCGCGGGAATCGCTATCTCTGCGATGTGGGCTACGGGCTGTGCGAACGCATCAATTAA
Upstream 100 bases:
>100_bases TACAGCACCCCATAGCCAATGCAGAAGGCTTTGGCGAAGACCAGGAGCAGGAGCCAATCCATGCCTTATCCCTAGCAAGC AGAGCCTGATAAGCAGGCTT
Downstream 100 bases:
>100_bases CGGCTGCGCAGTATTGGTTCATCACGTTTCGTGAGCTCTCGCAACGCTGCGTTTTGGTTTTCCCCTTAGCGCGAAGAACT CCTTAGACCGGAGGCACGAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 104; Mature: 104
Protein sequence:
>104_residues MHQWRSDRHKVSSSRQSQMGLDALLNAALGVALSNVAGSQPAAPWAGGASPLGSVAPVLGELVRQLPRQSPVPQQVSALQ EVVMDSRGNRYLCDVGYGLCERIN
Sequences:
>Translated_104_residues MHQWRSDRHKVSSSRQSQMGLDALLNAALGVALSNVAGSQPAAPWAGGASPLGSVAPVLGELVRQLPRQSPVPQQVSALQ EVVMDSRGNRYLCDVGYGLCERIN >Mature_104_residues MHQWRSDRHKVSSSRQSQMGLDALLNAALGVALSNVAGSQPAAPWAGGASPLGSVAPVLGELVRQLPRQSPVPQQVSALQ EVVMDSRGNRYLCDVGYGLCERIN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11065; Mature: 11065
Theoretical pI: Translated: 8.77; Mature: 8.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHQWRSDRHKVSSSRQSQMGLDALLNAALGVALSNVAGSQPAAPWAGGASPLGSVAPVLG CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHH ELVRQLPRQSPVPQQVSALQEVVMDSRGNRYLCDVGYGLCERIN HHHHHHHCCCCCCHHHHHHHHHHHHCCCCEEEHHHHHHHHHCCC >Mature Secondary Structure MHQWRSDRHKVSSSRQSQMGLDALLNAALGVALSNVAGSQPAAPWAGGASPLGSVAPVLG CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHH ELVRQLPRQSPVPQQVSALQEVVMDSRGNRYLCDVGYGLCERIN HHHHHHHCCCCCCHHHHHHHHHHHHCCCCEEEHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA