| Definition | Synechococcus sp. RCC307, complete genome. |
|---|---|
| Accession | NC_009482 |
| Length | 2,224,914 |
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The map label for this gene is 148242031
Identifier: 148242031
GI number: 148242031
Start: 855691
End: 856488
Strand: Direct
Name: 148242031
Synonym: SynRCC307_0932
Alternate gene names: NA
Gene position: 855691-856488 (Clockwise)
Preceding gene: 148242029
Following gene: 148242034
Centisome position: 38.46
GC content: 60.15
Gene sequence:
>798_bases ATGACGGATCAGTGGGAACGCAATCGCCTCAACTTTGAGGGGGTCTGGCAAGGCAAGAGCCAGTGGTATGTCCGTCAAGA CGACGGCGAGCTGAGCCTGGATCAGCCCACCACGGTGGTGGATGACACCCGCTACGCCATCAGCTTTGAGGATGCCGATA CCGGGCTATGGGATGGCACGGGGTTGTTCTTAGCTCCTGGCGGCGCAGCGCAATACCCCTTGAGCCGATCCACCTACAAC GGCTCAGGGGCCTGCTGGCAATTTGAAGCGGCTGGAGGGCAGTCGAGCCTTGAGGTTCCCGCTGACCTGCCCCGCTTTGG CCATGAAATCAATCTCTTCTATGGCCGCTCCCGCTCGATGCTGGTGCTGCTTTGGAAGCCGGATGGCAGCGATTGGCGCC TCAATGCCATTGGTGCGGTGGCGTTTCGCTGCCAGCTGAGTGATGAGAGGGAACCGGCAAGGCCCCAGGCCAGTTCGATC GAGCGGTTATTGGCGCCGTTGCAGGGTTGCTCTGGTGTGATCGAACGCTTCCACCCCCAACCCGGGCTGTCTGGCCAGCC ATCAGCGCCAGAGCCGATCACGTGGGATCCCCAACCTTTTCTTCAATCGGAGGTGTGTGGTGTGTTCGCCGATGGCTTGG TGTGTGGTGTTCCTGAGCGGTTGCCGAGCGGTGGATTTCGCTTGGAGGTGGGTTGCCTGCAGCCGTCGCGCTTTCAACAA CTCAGCATCGTGTTTGACCAACATCACAAGCTGCAGTGCTGGGAGCGGCGCTTATTTTCCGCAACGTTTGAGGCCTAA
Upstream 100 bases:
>100_bases GCTTCGCCCACATAGCCGCAACCCACCAGGCTCAAGCGCATTGTCGTTTTGAGCTGCCGCTGAGACCCTAATCAGGTCGT TCAGATCTGGAGCGCCGGTG
Downstream 100 bases:
>100_bases ATCAACCGCTGGCTTGGCCTGAGAGTTGGCGCAACAGAGCGCAGGTGAATTGATTGGAGCGCTGCATCAACGCCTCGAAC GCCTCTTTGGGAAACACCAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 265; Mature: 264
Protein sequence:
>265_residues MTDQWERNRLNFEGVWQGKSQWYVRQDDGELSLDQPTTVVDDTRYAISFEDADTGLWDGTGLFLAPGGAAQYPLSRSTYN GSGACWQFEAAGGQSSLEVPADLPRFGHEINLFYGRSRSMLVLLWKPDGSDWRLNAIGAVAFRCQLSDEREPARPQASSI ERLLAPLQGCSGVIERFHPQPGLSGQPSAPEPITWDPQPFLQSEVCGVFADGLVCGVPERLPSGGFRLEVGCLQPSRFQQ LSIVFDQHHKLQCWERRLFSATFEA
Sequences:
>Translated_265_residues MTDQWERNRLNFEGVWQGKSQWYVRQDDGELSLDQPTTVVDDTRYAISFEDADTGLWDGTGLFLAPGGAAQYPLSRSTYN GSGACWQFEAAGGQSSLEVPADLPRFGHEINLFYGRSRSMLVLLWKPDGSDWRLNAIGAVAFRCQLSDEREPARPQASSI ERLLAPLQGCSGVIERFHPQPGLSGQPSAPEPITWDPQPFLQSEVCGVFADGLVCGVPERLPSGGFRLEVGCLQPSRFQQ LSIVFDQHHKLQCWERRLFSATFEA >Mature_264_residues TDQWERNRLNFEGVWQGKSQWYVRQDDGELSLDQPTTVVDDTRYAISFEDADTGLWDGTGLFLAPGGAAQYPLSRSTYNG SGACWQFEAAGGQSSLEVPADLPRFGHEINLFYGRSRSMLVLLWKPDGSDWRLNAIGAVAFRCQLSDEREPARPQASSIE RLLAPLQGCSGVIERFHPQPGLSGQPSAPEPITWDPQPFLQSEVCGVFADGLVCGVPERLPSGGFRLEVGCLQPSRFQQL SIVFDQHHKLQCWERRLFSATFEA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29512; Mature: 29381
Theoretical pI: Translated: 4.58; Mature: 4.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDQWERNRLNFEGVWQGKSQWYVRQDDGELSLDQPTTVVDDTRYAISFEDADTGLWDGT CCCCCCCCCCCEEEEECCCCEEEEECCCCCEECCCCCEEECCCEEEEEECCCCCCCCCCC GLFLAPGGAAQYPLSRSTYNGSGACWQFEAAGGQSSLEVPADLPRFGHEINLFYGRSRSM EEEEECCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCEEEEEEECCCCE LVLLWKPDGSDWRLNAIGAVAFRCQLSDEREPARPQASSIERLLAPLQGCSGVIERFHPQ EEEEECCCCCCEEEEEEEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC PGLSGQPSAPEPITWDPQPFLQSEVCGVFADGLVCGVPERLPSGGFRLEVGCLQPSRFQQ CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCEEECCHHHCCCCCCEEEEECCCCCHHHE LSIVFDQHHKLQCWERRLFSATFEA EEEEECCCCHHHHHHHHHHHHHCCC >Mature Secondary Structure TDQWERNRLNFEGVWQGKSQWYVRQDDGELSLDQPTTVVDDTRYAISFEDADTGLWDGT CCCCCCCCCCEEEEECCCCEEEEECCCCCEECCCCCEEECCCEEEEEECCCCCCCCCCC GLFLAPGGAAQYPLSRSTYNGSGACWQFEAAGGQSSLEVPADLPRFGHEINLFYGRSRSM EEEEECCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCEEEEEEECCCCE LVLLWKPDGSDWRLNAIGAVAFRCQLSDEREPARPQASSIERLLAPLQGCSGVIERFHPQ EEEEECCCCCCEEEEEEEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC PGLSGQPSAPEPITWDPQPFLQSEVCGVFADGLVCGVPERLPSGGFRLEVGCLQPSRFQQ CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCEEECCHHHCCCCCCEEEEECCCCCHHHE LSIVFDQHHKLQCWERRLFSATFEA EEEEECCCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA