| Definition | Synechococcus sp. RCC307, complete genome. |
|---|---|
| Accession | NC_009482 |
| Length | 2,224,914 |
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The map label for this gene is 148242004
Identifier: 148242004
GI number: 148242004
Start: 824376
End: 824594
Strand: Direct
Name: 148242004
Synonym: SynRCC307_0905
Alternate gene names: NA
Gene position: 824376-824594 (Clockwise)
Preceding gene: 148242001
Following gene: 148242007
Centisome position: 37.05
GC content: 58.45
Gene sequence:
>219_bases ATGACACGTCTTTTTGTACTCGCCGTCGTTGGTCTAGCTGTAGCCCCCTTGCCCGCATTGGCAGGCTCGGCCACGTCCCA GTCGATCTGGAACATGGGCCATGCCCTGGGTCAAGCCAAAAGTCAGGTGCCCAATGGCGCCACGGTGACGGGCACCAATT GCAACGAGATTTATGTCGCCGATGATCCCCGCTGGACTTGCACCGTCACTTGGAAGTGA
Upstream 100 bases:
>100_bases GCTGACCATTGTTCGGCACGTTAGGGGCCGTTTGCAGCTTTGGCTTGCTGCTGCCGCCGTTACGAATCCCTAGCTAGGGG TATGGCACTGAGTTTTTCCT
Downstream 100 bases:
>100_bases GCTTGCGGGCCTGGGCTTGATCAGCCAAAGCTGAGACGCTCATCCTCGACGTCAACGGCGGCTGTGCTGCCTTCGCTGTA GCGGCCTGCCAGGATTGCCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 72; Mature: 71
Protein sequence:
>72_residues MTRLFVLAVVGLAVAPLPALAGSATSQSIWNMGHALGQAKSQVPNGATVTGTNCNEIYVADDPRWTCTVTWK
Sequences:
>Translated_72_residues MTRLFVLAVVGLAVAPLPALAGSATSQSIWNMGHALGQAKSQVPNGATVTGTNCNEIYVADDPRWTCTVTWK >Mature_71_residues TRLFVLAVVGLAVAPLPALAGSATSQSIWNMGHALGQAKSQVPNGATVTGTNCNEIYVADDPRWTCTVTWK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7559; Mature: 7428
Theoretical pI: Translated: 8.23; Mature: 8.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRLFVLAVVGLAVAPLPALAGSATSQSIWNMGHALGQAKSQVPNGATVTGTNCNEIYVA CCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEECCCCCEEEEE DDPRWTCTVTWK CCCCEEEEEEEC >Mature Secondary Structure TRLFVLAVVGLAVAPLPALAGSATSQSIWNMGHALGQAKSQVPNGATVTGTNCNEIYVA CHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEECCCCCEEEEE DDPRWTCTVTWK CCCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA