Definition Synechococcus sp. RCC307, complete genome.
Accession NC_009482
Length 2,224,914

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The map label for this gene is 148241946

Identifier: 148241946

GI number: 148241946

Start: 771441

End: 772145

Strand: Direct

Name: 148241946

Synonym: SynRCC307_0847

Alternate gene names: NA

Gene position: 771441-772145 (Clockwise)

Preceding gene: 148241944

Following gene: 148241949

Centisome position: 34.67

GC content: 54.47

Gene sequence:

>705_bases
ATGCCGGATTTTGTGGCTCGTTGGCGCGCTATCGCCATGGCAGCTTTGGCGTCCTTGCCGGTCTCAATCGCATCGGCTCC
GGCTTTGGCCATCCCCGAAGAGGCTGCCATTAAAAAGCTGGCCGTTGTTCCCGTTTTCCTGCTCACCTCTGAGCAGGGAA
TTCCCCTACCGATTCCTAGGGGCGACAACTTGATCCTGCCGATGTTCCTGCAGAAGGATCGGGCCAATCAGGAGCTCACC
ACCTTCGAGAAAGCCAACCCAAACGCCAAGGCCAAGATCTCCGCCCTTCCGATGAATGTGGCGAACGCCAAGGTCAATGA
GATGAATATCAAGCTCAAAGAGAGCGGCAAACAGATCGTGACGCCCGTGGTCGGCTCCAAAGCCGACATGGATCAGGCCG
TTGCGATTCTCCAGAAGCAGGGTGTGAGCAAAGAAGACATTCAAAAAGGTCTCTCTATCCCGGTCTTCTTCCACAAGCCT
TTCTTGACCATCAAGACCCCGGAAGGCAGCCGAGGCGTGTTTTTCATGACCTATCAGGACGCCACTACTGCGGCTAGCAA
AGTGCAAGGCACCAAGCCGGAAATCCTGGCTGTTGATCTCACCAATGCGCTGGCTCAGATCGTTGATGACAAGGAAGATC
GCTTTGTCTTCTATCCGACGAAAGCTTTCTTTGCGCTGATGAAGGACCAGAAAGCGTCGAACTAG

Upstream 100 bases:

>100_bases
TGCGCAGGTGGCTCGGGGTGGTCATGACATATACCGTCCAGCGAAGGAAGGTTAGTGGCCAGGAGCTGCCTACGCTCGCC
TCATTCCAATCGTGGGTCTC

Downstream 100 bases:

>100_bases
CCCTGAGCCTCATCTTTCTCGGGGGGAGGGGTTGGGATGAACTGGGCCAATAGGCCTGCTCCAACCAGCCCCAGGCCGAT
CATCAACGCCAAGACTTGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 234; Mature: 233

Protein sequence:

>234_residues
MPDFVARWRAIAMAALASLPVSIASAPALAIPEEAAIKKLAVVPVFLLTSEQGIPLPIPRGDNLILPMFLQKDRANQELT
TFEKANPNAKAKISALPMNVANAKVNEMNIKLKESGKQIVTPVVGSKADMDQAVAILQKQGVSKEDIQKGLSIPVFFHKP
FLTIKTPEGSRGVFFMTYQDATTAASKVQGTKPEILAVDLTNALAQIVDDKEDRFVFYPTKAFFALMKDQKASN

Sequences:

>Translated_234_residues
MPDFVARWRAIAMAALASLPVSIASAPALAIPEEAAIKKLAVVPVFLLTSEQGIPLPIPRGDNLILPMFLQKDRANQELT
TFEKANPNAKAKISALPMNVANAKVNEMNIKLKESGKQIVTPVVGSKADMDQAVAILQKQGVSKEDIQKGLSIPVFFHKP
FLTIKTPEGSRGVFFMTYQDATTAASKVQGTKPEILAVDLTNALAQIVDDKEDRFVFYPTKAFFALMKDQKASN
>Mature_233_residues
PDFVARWRAIAMAALASLPVSIASAPALAIPEEAAIKKLAVVPVFLLTSEQGIPLPIPRGDNLILPMFLQKDRANQELTT
FEKANPNAKAKISALPMNVANAKVNEMNIKLKESGKQIVTPVVGSKADMDQAVAILQKQGVSKEDIQKGLSIPVFFHKPF
LTIKTPEGSRGVFFMTYQDATTAASKVQGTKPEILAVDLTNALAQIVDDKEDRFVFYPTKAFFALMKDQKASN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25423; Mature: 25292

Theoretical pI: Translated: 10.02; Mature: 10.02

Prosite motif: PS00867 CPSASE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPDFVARWRAIAMAALASLPVSIASAPALAIPEEAAIKKLAVVPVFLLTSEQGIPLPIPR
CCHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCHHHHHHHHHHEEEEEECCCCCCCCCCC
GDNLILPMFLQKDRANQELTTFEKANPNAKAKISALPMNVANAKVNEMNIKLKESGKQIV
CCCEEEEHEECCCCCCCHHHHHHCCCCCCCEEEEEECCCCCCCEEEEEEEEEECCCCEEE
TPVVGSKADMDQAVAILQKQGVSKEDIQKGLSIPVFFHKPFLTIKTPEGSRGVFFMTYQD
EECCCCCCCHHHHHHHHHHCCCCHHHHHCCCCCEEEEECCEEEEECCCCCCCEEEEEECC
ATTAASKVQGTKPEILAVDLTNALAQIVDDKEDRFVFYPTKAFFALMKDQKASN
CHHHHHHCCCCCCCEEEEEHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHCCCC
>Mature Secondary Structure 
PDFVARWRAIAMAALASLPVSIASAPALAIPEEAAIKKLAVVPVFLLTSEQGIPLPIPR
CHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCHHHHHHHHHHEEEEEECCCCCCCCCCC
GDNLILPMFLQKDRANQELTTFEKANPNAKAKISALPMNVANAKVNEMNIKLKESGKQIV
CCCEEEEHEECCCCCCCHHHHHHCCCCCCCEEEEEECCCCCCCEEEEEEEEEECCCCEEE
TPVVGSKADMDQAVAILQKQGVSKEDIQKGLSIPVFFHKPFLTIKTPEGSRGVFFMTYQD
EECCCCCCCHHHHHHHHHHCCCCHHHHHCCCCCEEEEECCEEEEECCCCCCCEEEEEECC
ATTAASKVQGTKPEILAVDLTNALAQIVDDKEDRFVFYPTKAFFALMKDQKASN
CHHHHHHCCCCCCCEEEEEHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA