| Definition | Synechococcus sp. RCC307, complete genome. |
|---|---|
| Accession | NC_009482 |
| Length | 2,224,914 |
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The map label for this gene is gloB [H]
Identifier: 148241938
GI number: 148241938
Start: 763851
End: 764774
Strand: Direct
Name: gloB [H]
Synonym: SynRCC307_0839
Alternate gene names: 148241938
Gene position: 763851-764774 (Clockwise)
Preceding gene: 148241935
Following gene: 148241939
Centisome position: 34.33
GC content: 63.1
Gene sequence:
>924_bases ATGGCGCTGAAGTCGAGGCCGGCTGCAGCAAAGCGGGCCACCGAATCCTTCAGCAGTGCGCCTTTGGGCAGAGCGACGGT GAGCATGCTGTTTGCGCTCCAGCGCTGGACTTTAACGAGCAGCCTTCACACTGGTGAGAGAAGCCTTGTCTGCGTGGAGA TCCAGCGGCTACCCGTGCTGCGGGACAACTATGTGTTTGTGCTGGTGGATCCCGACGCAGCCGCAGCCGCCGTTGTTGAT CCAGCAGTGGCCGAACCGGTGATTGCGGCCTTGGAGGCCCAACAGCTCCGGCTCAGCGTGGTGCTGCAAACCCACCACCA CAAAGATCACATTGGCGGCACCCCAGCGCTGCTCAGCCGCTGGCCTGGCGCTCAGGTTTGGGCCGCGGCCTCCGACCGCG CTCGCATCCCCTTCCAAACCGATGGGCTGCGCGGGGGGGATCAACGGCTGCTGTTCAACCGCCCAGTGCAGGTGTTGGAG GTTCCTGGCCACACCCGCGATCACATCGCCTTTTTCTTCCCGGCTAGCGGCGGGGAAGGCCCTGAACTGTTTTGCGGCGA TACCCTGTTTGCAGGCGGTTGCGGGCGGCTGTTTGAAGGCACCGCCGAGCAGATGCTGCGCTCCCTCGATCAGTTGAGCG GCTTGCCGGAAGCTACCCGGATCTGGTGCGCCCATGAGTACACCGAAGCCAACTTGCGCTTTGCGATCACCCAGGAGCCA GGCAACCCAGCCCTGCAAGAACGATTTCAGCAGGTGCAAGCCATGCGAGCGGCTGGGGAAGCCACAGTTCCATCGTCGGT GGCCCTCGAGCGCGCCACCAATCCATTTTTGCGCTGCCGTGAAGCGTCCCTGCAGCAGGTCAGTGGATGCTGTGAACCAG CCTTGGTGTTGGCCGAAATCCGGCGCCGTAAAGACGTGTTCTGA
Upstream 100 bases:
>100_bases ATAGGCCACATACACCGGCACATCCCCATTGCGCACCAGCAGGGCCCGGGCGCGGCCGCAGGCGCTGGGCAGCATCAACT GGCGGTTGTCGGCCGCGGTG
Downstream 100 bases:
>100_bases GCTGGGAAGTGGGCAGGGATGATGGAGCCAGATGGTTCATCCCGATGAGCGCTGCTCCCCTCGAAGCTGTTGAAACGCAG GCCGCTCCAGCCCCGGTGGG
Product: hydroxyacylglutathione hydrolase
Products: NA
Alternate protein names: Glyoxalase II; Glx II [H]
Number of amino acids: Translated: 307; Mature: 306
Protein sequence:
>307_residues MALKSRPAAAKRATESFSSAPLGRATVSMLFALQRWTLTSSLHTGERSLVCVEIQRLPVLRDNYVFVLVDPDAAAAAVVD PAVAEPVIAALEAQQLRLSVVLQTHHHKDHIGGTPALLSRWPGAQVWAAASDRARIPFQTDGLRGGDQRLLFNRPVQVLE VPGHTRDHIAFFFPASGGEGPELFCGDTLFAGGCGRLFEGTAEQMLRSLDQLSGLPEATRIWCAHEYTEANLRFAITQEP GNPALQERFQQVQAMRAAGEATVPSSVALERATNPFLRCREASLQQVSGCCEPALVLAEIRRRKDVF
Sequences:
>Translated_307_residues MALKSRPAAAKRATESFSSAPLGRATVSMLFALQRWTLTSSLHTGERSLVCVEIQRLPVLRDNYVFVLVDPDAAAAAVVD PAVAEPVIAALEAQQLRLSVVLQTHHHKDHIGGTPALLSRWPGAQVWAAASDRARIPFQTDGLRGGDQRLLFNRPVQVLE VPGHTRDHIAFFFPASGGEGPELFCGDTLFAGGCGRLFEGTAEQMLRSLDQLSGLPEATRIWCAHEYTEANLRFAITQEP GNPALQERFQQVQAMRAAGEATVPSSVALERATNPFLRCREASLQQVSGCCEPALVLAEIRRRKDVF >Mature_306_residues ALKSRPAAAKRATESFSSAPLGRATVSMLFALQRWTLTSSLHTGERSLVCVEIQRLPVLRDNYVFVLVDPDAAAAAVVDP AVAEPVIAALEAQQLRLSVVLQTHHHKDHIGGTPALLSRWPGAQVWAAASDRARIPFQTDGLRGGDQRLLFNRPVQVLEV PGHTRDHIAFFFPASGGEGPELFCGDTLFAGGCGRLFEGTAEQMLRSLDQLSGLPEATRIWCAHEYTEANLRFAITQEPG NPALQERFQQVQAMRAAGEATVPSSVALERATNPFLRCREASLQQVSGCCEPALVLAEIRRRKDVF
Specific function: Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid [H]
COG id: COG0491
COG function: function code R; Zn-dependent hydrolases, including glyoxylases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the metallo-beta-lactamase superfamily. Glyoxalase II family [H]
Homologues:
Organism=Homo sapiens, GI94538320, Length=258, Percent_Identity=39.1472868217054, Blast_Score=197, Evalue=1e-50, Organism=Homo sapiens, GI94538322, Length=258, Percent_Identity=39.1472868217054, Blast_Score=197, Evalue=1e-50, Organism=Homo sapiens, GI116642887, Length=265, Percent_Identity=38.4905660377359, Blast_Score=168, Evalue=5e-42, Organism=Homo sapiens, GI21703352, Length=265, Percent_Identity=38.4905660377359, Blast_Score=168, Evalue=7e-42, Organism=Homo sapiens, GI14150041, Length=257, Percent_Identity=34.6303501945525, Blast_Score=148, Evalue=6e-36, Organism=Homo sapiens, GI46361987, Length=204, Percent_Identity=35.2941176470588, Blast_Score=125, Evalue=4e-29, Organism=Escherichia coli, GI1786406, Length=260, Percent_Identity=36.9230769230769, Blast_Score=169, Evalue=2e-43, Organism=Caenorhabditis elegans, GI17536925, Length=262, Percent_Identity=36.6412213740458, Blast_Score=163, Evalue=9e-41, Organism=Saccharomyces cerevisiae, GI6320478, Length=245, Percent_Identity=29.3877551020408, Blast_Score=103, Evalue=5e-23, Organism=Saccharomyces cerevisiae, GI6324614, Length=259, Percent_Identity=27.7992277992278, Blast_Score=99, Evalue=6e-22, Organism=Drosophila melanogaster, GI21356335, Length=259, Percent_Identity=41.6988416988417, Blast_Score=206, Evalue=1e-53, Organism=Drosophila melanogaster, GI24667711, Length=259, Percent_Identity=41.6988416988417, Blast_Score=206, Evalue=2e-53, Organism=Drosophila melanogaster, GI24667703, Length=259, Percent_Identity=41.6988416988417, Blast_Score=206, Evalue=2e-53,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001279 - InterPro: IPR017782 [H]
Pfam domain/function: PF00753 Lactamase_B [H]
EC number: =3.1.2.6 [H]
Molecular weight: Translated: 33458; Mature: 33326
Theoretical pI: Translated: 7.19; Mature: 7.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALKSRPAAAKRATESFSSAPLGRATVSMLFALQRWTLTSSLHTGERSLVCVEIQRLPVL CCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCEE RDNYVFVLVDPDAAAAAVVDPAVAEPVIAALEAQQLRLSVVLQTHHHKDHIGGTPALLSR ECCEEEEEECCCCCHHHHHCHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCHHHHHC WPGAQVWAAASDRARIPFQTDGLRGGDQRLLFNRPVQVLEVPGHTRDHIAFFFPASGGEG CCCCEEEEECCCCCCCCCCCCCCCCCCCEEEECCCEEEEECCCCCCCCEEEEEECCCCCC PELFCGDTLFAGGCGRLFEGTAEQMLRSLDQLSGLPEATRIWCAHEYTEANLRFAITQEP CEEEECCCEECCCCCHHHHHHHHHHHHHHHHHCCCCCHHEEEEEECCCCCCEEEEEEECC GNPALQERFQQVQAMRAAGEATVPSSVALERATNPFLRCREASLQQVSGCCEPALVLAEI CCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHH RRRKDVF HHHCCCC >Mature Secondary Structure ALKSRPAAAKRATESFSSAPLGRATVSMLFALQRWTLTSSLHTGERSLVCVEIQRLPVL CCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCEE RDNYVFVLVDPDAAAAAVVDPAVAEPVIAALEAQQLRLSVVLQTHHHKDHIGGTPALLSR ECCEEEEEECCCCCHHHHHCHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCHHHHHC WPGAQVWAAASDRARIPFQTDGLRGGDQRLLFNRPVQVLEVPGHTRDHIAFFFPASGGEG CCCCEEEEECCCCCCCCCCCCCCCCCCCEEEECCCEEEEECCCCCCCCEEEEEECCCCCC PELFCGDTLFAGGCGRLFEGTAEQMLRSLDQLSGLPEATRIWCAHEYTEANLRFAITQEP CEEEECCCEECCCCCHHHHHHHHHHHHHHHHHCCCCCHHEEEEEECCCCCCEEEEEEECC GNPALQERFQQVQAMRAAGEATVPSSVALERATNPFLRCREASLQQVSGCCEPALVLAEI CCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHH RRRKDVF HHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA