Definition Synechococcus sp. RCC307, complete genome.
Accession NC_009482
Length 2,224,914

Click here to switch to the map view.

The map label for this gene is cbiT [H]

Identifier: 148241882

GI number: 148241882

Start: 713780

End: 714391

Strand: Direct

Name: cbiT [H]

Synonym: SynRCC307_0783

Alternate gene names: 148241882

Gene position: 713780-714391 (Clockwise)

Preceding gene: 148241881

Following gene: 148241883

Centisome position: 32.08

GC content: 62.91

Gene sequence:

>612_bases
GTGGCCCTTCAGGAGCCATACCAGTGGGATTTCGTGACCCCGGGTTTGCCCGATGGGGTTTTTGAGGCGGCTCCTGGATT
TAGCCCGACGCCGATGGAGCTGCGGGTGATCCTGCTGGCCTATTTGCGGCCGAGACCCGATTCAGTGGTTTGGGATGTGG
GCGGCGGTACTGGTGCGCTCGCTCTGGAGATCGCCCGTCTGTTGCCCGGCGGGCGGGTGCAGGCGCTCGAGCGTGATCCA
GAAGCGATCGATCTGCTGGAGCTCAACCGGGCCCGGTTTGGGATCAAAAATCTCGAGGTGTTTGCGGGGCAAGCTCCAGC
CGATCTCGCCAAGCTGGCGCCGGCTCCAGACCGGGTGGTGCTGGAGGTGGGGCGTCCCTTGGGCGATGTGCTGCGAGCCG
TTTGGGATGCCATGGCTCCAGCTGGTCGTTTGGTGATCAGCACCACCAGTCTGGAGGGCTTGGTGGATGCCACCGACCAT
CTGGGTCAATTGGCAGCCAATGATGTGCAGGTGTCTCAAGCCACTGTTCATCGCATGGTGCGGCGCAGTAATCAAACGCG
CTTGGCCGCGGCGGAACCTCTGTTCGTGATTGCGGCCGAACGTCACCCATGA

Upstream 100 bases:

>100_bases
GTGAGCGGCTGGAAGCAGAGCGCTTGGAGTGGCTGCAGCAGCAGCAGCGGCTTTGGGCCGGTCAGATCCCTGATACGGTA
AGGGTTCTGGTCTGATTGCA

Downstream 100 bases:

>100_bases
GGGGCTCGAGCCGTTGGTTGAGCGGTCTGGCGGCGGCAGCCTTTGGTCTCTTGATCGTTGGGTTGGGGGGCTGGTGGTTC
ACCCTCAGCCTCGGTGTGAT

Product: precorrin-6B methylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 203; Mature: 202

Protein sequence:

>203_residues
MALQEPYQWDFVTPGLPDGVFEAAPGFSPTPMELRVILLAYLRPRPDSVVWDVGGGTGALALEIARLLPGGRVQALERDP
EAIDLLELNRARFGIKNLEVFAGQAPADLAKLAPAPDRVVLEVGRPLGDVLRAVWDAMAPAGRLVISTTSLEGLVDATDH
LGQLAANDVQVSQATVHRMVRRSNQTRLAAAEPLFVIAAERHP

Sequences:

>Translated_203_residues
MALQEPYQWDFVTPGLPDGVFEAAPGFSPTPMELRVILLAYLRPRPDSVVWDVGGGTGALALEIARLLPGGRVQALERDP
EAIDLLELNRARFGIKNLEVFAGQAPADLAKLAPAPDRVVLEVGRPLGDVLRAVWDAMAPAGRLVISTTSLEGLVDATDH
LGQLAANDVQVSQATVHRMVRRSNQTRLAAAEPLFVIAAERHP
>Mature_202_residues
ALQEPYQWDFVTPGLPDGVFEAAPGFSPTPMELRVILLAYLRPRPDSVVWDVGGGTGALALEIARLLPGGRVQALERDPE
AIDLLELNRARFGIKNLEVFAGQAPADLAKLAPAPDRVVLEVGRPLGDVLRAVWDAMAPAGRLVISTTSLEGLVDATDHL
GQLAANDVQVSQATVHRMVRRSNQTRLAAAEPLFVIAAERHP

Specific function: Probably catalyzes the methylation of either C-15 or C-5 in cobalt-precorrin-6Y to form cobalt-precorrin-7W. Methylation of C-15 would probably be followed by a spontaneous decarboxylation of C-12 [H]

COG id: COG2242

COG function: function code H; Precorrin-6B methylase 2

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. Archaeal-type CbiT family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014008
- InterPro:   IPR010456 [H]

Pfam domain/function: PF06325 PrmA [H]

EC number: 1.-.-.-

Molecular weight: Translated: 21834; Mature: 21703

Theoretical pI: Translated: 4.87; Mature: 4.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALQEPYQWDFVTPGLPDGVFEAAPGFSPTPMELRVILLAYLRPRPDSVVWDVGGGTGAL
CCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHCCCCCCEEEECCCCCHHH
ALEIARLLPGGRVQALERDPEAIDLLELNRARFGIKNLEVFAGQAPADLAKLAPAPDRVV
HHHHHHHCCCCCEEHCCCCCCHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHCCCCCCEE
LEVGRPLGDVLRAVWDAMAPAGRLVISTTSLEGLVDATDHLGQLAANDVQVSQATVHRMV
EECCCCHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHH
RRSNQTRLAAAEPLFVIAAERHP
HHCCCCEEEECCCEEEEEECCCC
>Mature Secondary Structure 
ALQEPYQWDFVTPGLPDGVFEAAPGFSPTPMELRVILLAYLRPRPDSVVWDVGGGTGAL
CCCCCCCCCCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHCCCCCCEEEECCCCCHHH
ALEIARLLPGGRVQALERDPEAIDLLELNRARFGIKNLEVFAGQAPADLAKLAPAPDRVV
HHHHHHHCCCCCEEHCCCCCCHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHCCCCCCEE
LEVGRPLGDVLRAVWDAMAPAGRLVISTTSLEGLVDATDHLGQLAANDVQVSQATVHRMV
EECCCCHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHH
RRSNQTRLAAAEPLFVIAAERHP
HHCCCCEEEECCCEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA