| Definition | Synechococcus sp. RCC307, complete genome. |
|---|---|
| Accession | NC_009482 |
| Length | 2,224,914 |
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The map label for this gene is cbiT [H]
Identifier: 148241882
GI number: 148241882
Start: 713780
End: 714391
Strand: Direct
Name: cbiT [H]
Synonym: SynRCC307_0783
Alternate gene names: 148241882
Gene position: 713780-714391 (Clockwise)
Preceding gene: 148241881
Following gene: 148241883
Centisome position: 32.08
GC content: 62.91
Gene sequence:
>612_bases GTGGCCCTTCAGGAGCCATACCAGTGGGATTTCGTGACCCCGGGTTTGCCCGATGGGGTTTTTGAGGCGGCTCCTGGATT TAGCCCGACGCCGATGGAGCTGCGGGTGATCCTGCTGGCCTATTTGCGGCCGAGACCCGATTCAGTGGTTTGGGATGTGG GCGGCGGTACTGGTGCGCTCGCTCTGGAGATCGCCCGTCTGTTGCCCGGCGGGCGGGTGCAGGCGCTCGAGCGTGATCCA GAAGCGATCGATCTGCTGGAGCTCAACCGGGCCCGGTTTGGGATCAAAAATCTCGAGGTGTTTGCGGGGCAAGCTCCAGC CGATCTCGCCAAGCTGGCGCCGGCTCCAGACCGGGTGGTGCTGGAGGTGGGGCGTCCCTTGGGCGATGTGCTGCGAGCCG TTTGGGATGCCATGGCTCCAGCTGGTCGTTTGGTGATCAGCACCACCAGTCTGGAGGGCTTGGTGGATGCCACCGACCAT CTGGGTCAATTGGCAGCCAATGATGTGCAGGTGTCTCAAGCCACTGTTCATCGCATGGTGCGGCGCAGTAATCAAACGCG CTTGGCCGCGGCGGAACCTCTGTTCGTGATTGCGGCCGAACGTCACCCATGA
Upstream 100 bases:
>100_bases GTGAGCGGCTGGAAGCAGAGCGCTTGGAGTGGCTGCAGCAGCAGCAGCGGCTTTGGGCCGGTCAGATCCCTGATACGGTA AGGGTTCTGGTCTGATTGCA
Downstream 100 bases:
>100_bases GGGGCTCGAGCCGTTGGTTGAGCGGTCTGGCGGCGGCAGCCTTTGGTCTCTTGATCGTTGGGTTGGGGGGCTGGTGGTTC ACCCTCAGCCTCGGTGTGAT
Product: precorrin-6B methylase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 203; Mature: 202
Protein sequence:
>203_residues MALQEPYQWDFVTPGLPDGVFEAAPGFSPTPMELRVILLAYLRPRPDSVVWDVGGGTGALALEIARLLPGGRVQALERDP EAIDLLELNRARFGIKNLEVFAGQAPADLAKLAPAPDRVVLEVGRPLGDVLRAVWDAMAPAGRLVISTTSLEGLVDATDH LGQLAANDVQVSQATVHRMVRRSNQTRLAAAEPLFVIAAERHP
Sequences:
>Translated_203_residues MALQEPYQWDFVTPGLPDGVFEAAPGFSPTPMELRVILLAYLRPRPDSVVWDVGGGTGALALEIARLLPGGRVQALERDP EAIDLLELNRARFGIKNLEVFAGQAPADLAKLAPAPDRVVLEVGRPLGDVLRAVWDAMAPAGRLVISTTSLEGLVDATDH LGQLAANDVQVSQATVHRMVRRSNQTRLAAAEPLFVIAAERHP >Mature_202_residues ALQEPYQWDFVTPGLPDGVFEAAPGFSPTPMELRVILLAYLRPRPDSVVWDVGGGTGALALEIARLLPGGRVQALERDPE AIDLLELNRARFGIKNLEVFAGQAPADLAKLAPAPDRVVLEVGRPLGDVLRAVWDAMAPAGRLVISTTSLEGLVDATDHL GQLAANDVQVSQATVHRMVRRSNQTRLAAAEPLFVIAAERHP
Specific function: Probably catalyzes the methylation of either C-15 or C-5 in cobalt-precorrin-6Y to form cobalt-precorrin-7W. Methylation of C-15 would probably be followed by a spontaneous decarboxylation of C-12 [H]
COG id: COG2242
COG function: function code H; Precorrin-6B methylase 2
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the methyltransferase superfamily. Archaeal-type CbiT family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014008 - InterPro: IPR010456 [H]
Pfam domain/function: PF06325 PrmA [H]
EC number: 1.-.-.-
Molecular weight: Translated: 21834; Mature: 21703
Theoretical pI: Translated: 4.87; Mature: 4.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALQEPYQWDFVTPGLPDGVFEAAPGFSPTPMELRVILLAYLRPRPDSVVWDVGGGTGAL CCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHCCCCCCEEEECCCCCHHH ALEIARLLPGGRVQALERDPEAIDLLELNRARFGIKNLEVFAGQAPADLAKLAPAPDRVV HHHHHHHCCCCCEEHCCCCCCHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHCCCCCCEE LEVGRPLGDVLRAVWDAMAPAGRLVISTTSLEGLVDATDHLGQLAANDVQVSQATVHRMV EECCCCHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHH RRSNQTRLAAAEPLFVIAAERHP HHCCCCEEEECCCEEEEEECCCC >Mature Secondary Structure ALQEPYQWDFVTPGLPDGVFEAAPGFSPTPMELRVILLAYLRPRPDSVVWDVGGGTGAL CCCCCCCCCCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHCCCCCCEEEECCCCCHHH ALEIARLLPGGRVQALERDPEAIDLLELNRARFGIKNLEVFAGQAPADLAKLAPAPDRVV HHHHHHHCCCCCEEHCCCCCCHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHCCCCCCEE LEVGRPLGDVLRAVWDAMAPAGRLVISTTSLEGLVDATDHLGQLAANDVQVSQATVHRMV EECCCCHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHH RRSNQTRLAAAEPLFVIAAERHP HHCCCCEEEECCCEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA