| Definition | Synechococcus sp. RCC307, complete genome. |
|---|---|
| Accession | NC_009482 |
| Length | 2,224,914 |
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The map label for this gene is 148241792
Identifier: 148241792
GI number: 148241792
Start: 626365
End: 626922
Strand: Direct
Name: 148241792
Synonym: SynRCC307_0693
Alternate gene names: NA
Gene position: 626365-626922 (Clockwise)
Preceding gene: 148241791
Following gene: 148241793
Centisome position: 28.15
GC content: 48.03
Gene sequence:
>558_bases ATGGCAGCACGCAAGAAGAAACTCAAAAAACCTGAGGTGCTTGATCTGATACTTGCGCTTCAGGCATCAGGCAATATCAC CGTTGAAATGCTTCTGAACTTTGCAGAGCAAATCAATGGCGGCCCATTCACAGAGCCAAGTGCAACGAAGCCCAAGGCGA TAACCATGGCAAAAATGAGGAAGGCAGTTCTTGCCAAGTTTGGATGTAAGACAGTTACAGAGCTCAGAAAGAATCGAACT TTTGAAATGGCTTTCACTGGAGAGAAGGTCAGCCTTAAGTCAACGGAAGATTGGCGGGTTCAATATCGCAAGTGGGTTGC TGTTCCAAATGACGAGCGTAATCAAAGCGGCCAGACCTGCATTAATGGCGTTGACGTACTAGAGAACTTCAGGCCTTGGC ACATCTTTGGTCTCGATTCTGCAACGGCAACTGAAAGCGATGTCAAAGGGTCATTCAGAGACTTGGCCAAGAAGCATCAT CCAGATGTCGGTGGAGATGCACGGGTCTTTGAGCGCCTGCAGAAGATGCGCGATTCCCTTTTGGCCTTGATGAACTAA
Upstream 100 bases:
>100_bases ATCATCAGATGGAAAAACTTACATGCTGCACAGTGGTATGTGGATTGAAGAGCAAATTTTAAATCGCTGAATTCACGCTT AATTTTCCTCAAGGAGTCAT
Downstream 100 bases:
>100_bases CAGGAGTTATTAGCGATGAGAGACTTCCTTACTGACCGCGAAACAGCCAAAATCCTTGGCAAGCGAATTGACACCCTCTA CAAAACCGTCGATTTCTTTG
Product: DnaJ domain-containing protein
Products: NA
Alternate protein names: DNAJ Domain Protein; Heat Shock Protein DNAJ-Like; Heat Shock Protein DNAJ Domain Protein
Number of amino acids: Translated: 185; Mature: 184
Protein sequence:
>185_residues MAARKKKLKKPEVLDLILALQASGNITVEMLLNFAEQINGGPFTEPSATKPKAITMAKMRKAVLAKFGCKTVTELRKNRT FEMAFTGEKVSLKSTEDWRVQYRKWVAVPNDERNQSGQTCINGVDVLENFRPWHIFGLDSATATESDVKGSFRDLAKKHH PDVGGDARVFERLQKMRDSLLALMN
Sequences:
>Translated_185_residues MAARKKKLKKPEVLDLILALQASGNITVEMLLNFAEQINGGPFTEPSATKPKAITMAKMRKAVLAKFGCKTVTELRKNRT FEMAFTGEKVSLKSTEDWRVQYRKWVAVPNDERNQSGQTCINGVDVLENFRPWHIFGLDSATATESDVKGSFRDLAKKHH PDVGGDARVFERLQKMRDSLLALMN >Mature_184_residues AARKKKLKKPEVLDLILALQASGNITVEMLLNFAEQINGGPFTEPSATKPKAITMAKMRKAVLAKFGCKTVTELRKNRTF EMAFTGEKVSLKSTEDWRVQYRKWVAVPNDERNQSGQTCINGVDVLENFRPWHIFGLDSATATESDVKGSFRDLAKKHHP DVGGDARVFERLQKMRDSLLALMN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20810; Mature: 20679
Theoretical pI: Translated: 10.39; Mature: 10.39
Prosite motif: PS50076 DNAJ_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAARKKKLKKPEVLDLILALQASGNITVEMLLNFAEQINGGPFTEPSATKPKAITMAKMR CCCCHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHH KAVLAKFGCKTVTELRKNRTFEMAFTGEKVSLKSTEDWRVQYRKWVAVPNDERNQSGQTC HHHHHHHCHHHHHHHHHCCCEEEEECCCEEEECCCHHHHHHHHHEECCCCCCCCCCCHHH INGVDVLENFRPWHIFGLDSATATESDVKGSFRDLAKKHHPDVGGDARVFERLQKMRDSL HHHHHHHHCCCCEEEEECCCCCCCHHHHCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH LALMN HHHCC >Mature Secondary Structure AARKKKLKKPEVLDLILALQASGNITVEMLLNFAEQINGGPFTEPSATKPKAITMAKMR CCCHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHH KAVLAKFGCKTVTELRKNRTFEMAFTGEKVSLKSTEDWRVQYRKWVAVPNDERNQSGQTC HHHHHHHCHHHHHHHHHCCCEEEEECCCEEEECCCHHHHHHHHHEECCCCCCCCCCCHHH INGVDVLENFRPWHIFGLDSATATESDVKGSFRDLAKKHHPDVGGDARVFERLQKMRDSL HHHHHHHHCCCCEEEEECCCCCCCHHHHCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH LALMN HHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA