Definition Synechococcus sp. RCC307, complete genome.
Accession NC_009482
Length 2,224,914

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The map label for this gene is 148241790

Identifier: 148241790

GI number: 148241790

Start: 624088

End: 625419

Strand: Direct

Name: 148241790

Synonym: SynRCC307_0691

Alternate gene names: NA

Gene position: 624088-625419 (Clockwise)

Preceding gene: 148241789

Following gene: 148241791

Centisome position: 28.05

GC content: 58.86

Gene sequence:

>1332_bases
TTGAGGCCTTCCGTTTGGGAACCTTCCACCCTTTGTCTGATGGTTAGCGCAGAATCTTGGGGAAAAGCCCTTCGCCGGGA
CATCAAAAACGAGTACGGGCCTGGCTGGAGCGTTAGCGCACAATCCGGCAAAACCAAACTGACCAGGCGTTACGCAGACG
GCACGCGAAGCAGCGTGATGATCGAGATCCCTTTTTCGAGCGGCCACAAGCGGGAACTGCTTATCGCCATTGGCACCCAT
GCAGAGCAGATGGCTGAACAGCAAATCAGCCTGAAGGAAAGCCGCAAACGCACAGCTGTCACTGCTGCCAATCCAGAAGG
GGTGTTCGTTTGGGATGAGGCTGCAAAGGCCTTCTACGAGACCCGCAAAGACCTTGGGCCGGTGACTCAGAGGAACACCG
TCACCCGCATTGAAAAGGCGCTGGATTCGCTCAATCGCAAGCCAAGACCAAAGGATGGGCTGGAGTTGCTCGCTGCATTT
GAACGGCAGCATTTGCAGCACCTTCAGCCAGGAAGTGAGGGCCGCAAGAAATCAATTCAGGAGGTTGGCAAGTTCTTGCG
TTTCTGCGTTGAGCGCCGTGGATTGGCTGGCCGATGGATGCCGCCTGTTGGTGAACAGCGCCAGGAATTGGTGGGTGCTG
CCGAGGGCCGCGATGCCAAGTTGACCCCACCGCTGAAGACAGACGATTTCATCGCGCTGCTGAGCGAGCTGGAGCGACGT
CGCCAGCATGGCCTTCGCCTTGCTGTTGGGCTGGTGGGGCTCTACGGCTTGAGGCCAGCTGAGTTGGCTGTGCTGAGTTT
TGAAGACGGCCAGCTGAGGGTCGGCCAGGTGAAGCGCAACATGGCTGCCATCCGCAAAGGGGCCAAGCAGCAGGCCAGAG
AAAACTTGCGCCTGGCGTTGCCGCTGGACCTACCAGGCCATGAAGGCCTTGGCGCTCAATTAGCGCTGCAGTGGCAATCC
GGCTTGGTGAAGCTGCCCCTGCCAATCCGCACTGCAATCAAAACTGCTGAAAAAACGGGTTCCTACAAACCAGTGGGCGA
TGCCTTCCGGCAGCTGCTGGATCGCCACCGTTTCTGGAAATCGCTGGTGGCCGGCAACCCTGGGCTGACCCCGTACAGCC
TGCGGCATTCATTTGCCTGGCGGGCTCACAAGCAATACGACCGCCCGCTGTCAGTTCGTGATGCTGCTGCGCTGATGGGC
CATGACCCCGAAACCCATTACAAGCACTACGGGCGATGGACCGATGAGGCTGGGCTGCTGGATGCAGTGAGTCGTCTGAC
AGCGCAGCCTGCAAAGCCAGCTTCCCAAGCTTTTGGAGCTATAGGCGCCTGA

Upstream 100 bases:

>100_bases
GTTTACGAGGAATTGACTGCATAGCCAGCTATGGCGTGCTGGGGCTCAATATGGACGTTCTGCGCTAAAAACTGCGCTAA
CTTTTGGGGACTCAGGCCAG

Downstream 100 bases:

>100_bases
ATGCCGGTAGCTTCATCAGCTCTCACTTTTCTCTCATGAGACTGAAAGTGCTGCTGGGTGCCGTTGTGGCGTCTGCCGCT
GGACTAGCAGGCATAAAGGC

Product: Phage integrase family protein

Products: NA

Alternate protein names: Phage Integrase; Phage Integrase Family

Number of amino acids: Translated: 443; Mature: 443

Protein sequence:

>443_residues
MRPSVWEPSTLCLMVSAESWGKALRRDIKNEYGPGWSVSAQSGKTKLTRRYADGTRSSVMIEIPFSSGHKRELLIAIGTH
AEQMAEQQISLKESRKRTAVTAANPEGVFVWDEAAKAFYETRKDLGPVTQRNTVTRIEKALDSLNRKPRPKDGLELLAAF
ERQHLQHLQPGSEGRKKSIQEVGKFLRFCVERRGLAGRWMPPVGEQRQELVGAAEGRDAKLTPPLKTDDFIALLSELERR
RQHGLRLAVGLVGLYGLRPAELAVLSFEDGQLRVGQVKRNMAAIRKGAKQQARENLRLALPLDLPGHEGLGAQLALQWQS
GLVKLPLPIRTAIKTAEKTGSYKPVGDAFRQLLDRHRFWKSLVAGNPGLTPYSLRHSFAWRAHKQYDRPLSVRDAAALMG
HDPETHYKHYGRWTDEAGLLDAVSRLTAQPAKPASQAFGAIGA

Sequences:

>Translated_443_residues
MRPSVWEPSTLCLMVSAESWGKALRRDIKNEYGPGWSVSAQSGKTKLTRRYADGTRSSVMIEIPFSSGHKRELLIAIGTH
AEQMAEQQISLKESRKRTAVTAANPEGVFVWDEAAKAFYETRKDLGPVTQRNTVTRIEKALDSLNRKPRPKDGLELLAAF
ERQHLQHLQPGSEGRKKSIQEVGKFLRFCVERRGLAGRWMPPVGEQRQELVGAAEGRDAKLTPPLKTDDFIALLSELERR
RQHGLRLAVGLVGLYGLRPAELAVLSFEDGQLRVGQVKRNMAAIRKGAKQQARENLRLALPLDLPGHEGLGAQLALQWQS
GLVKLPLPIRTAIKTAEKTGSYKPVGDAFRQLLDRHRFWKSLVAGNPGLTPYSLRHSFAWRAHKQYDRPLSVRDAAALMG
HDPETHYKHYGRWTDEAGLLDAVSRLTAQPAKPASQAFGAIGA
>Mature_443_residues
MRPSVWEPSTLCLMVSAESWGKALRRDIKNEYGPGWSVSAQSGKTKLTRRYADGTRSSVMIEIPFSSGHKRELLIAIGTH
AEQMAEQQISLKESRKRTAVTAANPEGVFVWDEAAKAFYETRKDLGPVTQRNTVTRIEKALDSLNRKPRPKDGLELLAAF
ERQHLQHLQPGSEGRKKSIQEVGKFLRFCVERRGLAGRWMPPVGEQRQELVGAAEGRDAKLTPPLKTDDFIALLSELERR
RQHGLRLAVGLVGLYGLRPAELAVLSFEDGQLRVGQVKRNMAAIRKGAKQQARENLRLALPLDLPGHEGLGAQLALQWQS
GLVKLPLPIRTAIKTAEKTGSYKPVGDAFRQLLDRHRFWKSLVAGNPGLTPYSLRHSFAWRAHKQYDRPLSVRDAAALMG
HDPETHYKHYGRWTDEAGLLDAVSRLTAQPAKPASQAFGAIGA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49339; Mature: 49339

Theoretical pI: Translated: 10.69; Mature: 10.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRPSVWEPSTLCLMVSAESWGKALRRDIKNEYGPGWSVSAQSGKTKLTRRYADGTRSSVM
CCCCCCCCCEEEEEEECHHHHHHHHHHHHHHCCCCCEEECCCCCHHHHHHHCCCCCCEEE
IEIPFSSGHKRELLIAIGTHAEQMAEQQISLKESRKRTAVTAANPEGVFVWDEAAKAFYE
EEECCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHEEEECCCCCEEEEHHHHHHHHH
TRKDLGPVTQRNTVTRIEKALDSLNRKPRPKDGLELLAAFERQHLQHLQPGSEGRKKSIQ
HHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
EVGKFLRFCVERRGLAGRWMPPVGEQRQELVGAAEGRDAKLTPPLKTDDFIALLSELERR
HHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHH
RQHGLRLAVGLVGLYGLRPAELAVLSFEDGQLRVGQVKRNMAAIRKGAKQQARENLRLAL
HHCCHHHHHHHHHHHCCCHHHEEEEEECCCCEEHHHHHHHHHHHHHHHHHHHHCCCEEEE
PLDLPGHEGLGAQLALQWQSGLVKLPLPIRTAIKTAEKTGSYKPVGDAFRQLLDRHRFWK
EECCCCCCCCCCEEEEEECCCCEECCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
SLVAGNPGLTPYSLRHSFAWRAHKQYDRPLSVRDAAALMGHDPETHYKHYGRWTDEAGLL
HHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCHHHHHHCCCCCCCHHHH
DAVSRLTAQPAKPASQAFGAIGA
HHHHHHHCCCCCHHHHHHHCCCC
>Mature Secondary Structure
MRPSVWEPSTLCLMVSAESWGKALRRDIKNEYGPGWSVSAQSGKTKLTRRYADGTRSSVM
CCCCCCCCCEEEEEEECHHHHHHHHHHHHHHCCCCCEEECCCCCHHHHHHHCCCCCCEEE
IEIPFSSGHKRELLIAIGTHAEQMAEQQISLKESRKRTAVTAANPEGVFVWDEAAKAFYE
EEECCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHEEEECCCCCEEEEHHHHHHHHH
TRKDLGPVTQRNTVTRIEKALDSLNRKPRPKDGLELLAAFERQHLQHLQPGSEGRKKSIQ
HHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
EVGKFLRFCVERRGLAGRWMPPVGEQRQELVGAAEGRDAKLTPPLKTDDFIALLSELERR
HHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHH
RQHGLRLAVGLVGLYGLRPAELAVLSFEDGQLRVGQVKRNMAAIRKGAKQQARENLRLAL
HHCCHHHHHHHHHHHCCCHHHEEEEEECCCCEEHHHHHHHHHHHHHHHHHHHHCCCEEEE
PLDLPGHEGLGAQLALQWQSGLVKLPLPIRTAIKTAEKTGSYKPVGDAFRQLLDRHRFWK
EECCCCCCCCCCEEEEEECCCCEECCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
SLVAGNPGLTPYSLRHSFAWRAHKQYDRPLSVRDAAALMGHDPETHYKHYGRWTDEAGLL
HHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCHHHHHHCCCCCCCHHHH
DAVSRLTAQPAKPASQAFGAIGA
HHHHHHHCCCCCHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA