The gene/protein map for NC_009482 is currently unavailable.
Definition Synechococcus sp. RCC307, complete genome.
Accession NC_009482
Length 2,224,914

Click here to switch to the map view.

The map label for this gene is 148241775

Identifier: 148241775

GI number: 148241775

Start: 613710

End: 614528

Strand: Direct

Name: 148241775

Synonym: SynRCC307_0676

Alternate gene names: NA

Gene position: 613710-614528 (Clockwise)

Preceding gene: 148241774

Following gene: 148241776

Centisome position: 27.58

GC content: 62.39

Gene sequence:

>819_bases
ATGACCGTCGCCCCAGCCGCTCAGCTCAGCCAGGAGACCCTGGCACTCACCAAGAGGCTGTTTGTCCAGCTGCAGCGCCG
CCCCTCCACCTTGGTGGCGGGTGTGCTGCAGCCGTTGATTTGGTTGGTGCTCTTTGGTGCCCTGTTCGCCAATGCTCCCG
ATGGCTTGATTCCAGGGGGCGTGAGCTATGGCCGCTTCTTGGGGGCTGGGGTGATCGTCTTCACCGCCTTCAGTGCTGCC
CTCAATGCCGGGCTGCCGGTGATGTTTGACCGCGAATTTGGCTTTCTCAATCGCCTGTTGGTGGCGCCCTTGCGCTCGCG
CTACTCGATCGTGCTCGCCTCGGTGCTCTACATCACCAGCCTTTCACTGGTGCAGAGCCTGGCGATCATGGCGGCCGCCT
GGGGCTTGGGCTATGGCTGGCCCGGTGGCGCTGGGTTGCTGGTGGTGTTGCTCACCTTGCTGCTGCTTGTCGCTGCGGTC
ACCGCCCTCAGCCTGGGTTTGGCCTTTGCCCTGCCAGGCCATATCGAGTTGATCGCTGTGATCTTTGTGGCCAACCTGCC
GCTGCTGTTTGCCAGCACAGCGCTGGCGCCCATCAGCTTCATGCCGTCCTGGTTGGGCTGGCTTGCAGCCTTAAATCCCC
TTACCTTCGCGATTGAACCGATACGCGCGGCGTATTTGGGGCAATTCAGCCTCAATGCGGTGGTGCTGGAGGCTCCCTAT
GGCTCCCTTACGGCAGCCCAGTGTCTCTCGGCTCTGCTGATCCTGTCGGCGGCTCTGTTCGTGTCCATCCGGCCTTTGTT
GGACCGGAAGCTGAGCTGA

Upstream 100 bases:

>100_bases
CTTGATGGATGCGGAGCTGGCTTCGGTGTCGAGCCGCGACCCCAAGGCCGAGAAAAAGCAAGCCATGCGTTGAGCTGGCC
CTGTCCCCCTGTTTGCTGTC

Downstream 100 bases:

>100_bases
TCTTGTGCCTGCTGTCTTTGTTTCGCCCCGCCTGCGTGAGCGTCAACTCCGGGAAGCTCTGCAAGAAGCCCTCCAACAGC
AGGACGCTCAAGCGCTGCGC

Product: ABC-type multidrug transport system, ATPase component

Products: NA

Alternate protein names: Multidrug Efflux ABC Transporter; ABC-Type Multidrug Transport System Permease Component; ABC-2 Type Transporter Superfamily; ABC-2 Type Transport System Permease Protein; Daunorubicin Resistance ABC Transporter Membrane Protein; ABC-Type Multidrug Transport System ATPase Component; Multidrug ABC Transporter; ABC Transporter Permease Protein; Drug Exporter ABC Transporter Permease; Multidrug ABC Transporter Permease Component; ABC-2 Type Tranporter

Number of amino acids: Translated: 272; Mature: 271

Protein sequence:

>272_residues
MTVAPAAQLSQETLALTKRLFVQLQRRPSTLVAGVLQPLIWLVLFGALFANAPDGLIPGGVSYGRFLGAGVIVFTAFSAA
LNAGLPVMFDREFGFLNRLLVAPLRSRYSIVLASVLYITSLSLVQSLAIMAAAWGLGYGWPGGAGLLVVLLTLLLLVAAV
TALSLGLAFALPGHIELIAVIFVANLPLLFASTALAPISFMPSWLGWLAALNPLTFAIEPIRAAYLGQFSLNAVVLEAPY
GSLTAAQCLSALLILSAALFVSIRPLLDRKLS

Sequences:

>Translated_272_residues
MTVAPAAQLSQETLALTKRLFVQLQRRPSTLVAGVLQPLIWLVLFGALFANAPDGLIPGGVSYGRFLGAGVIVFTAFSAA
LNAGLPVMFDREFGFLNRLLVAPLRSRYSIVLASVLYITSLSLVQSLAIMAAAWGLGYGWPGGAGLLVVLLTLLLLVAAV
TALSLGLAFALPGHIELIAVIFVANLPLLFASTALAPISFMPSWLGWLAALNPLTFAIEPIRAAYLGQFSLNAVVLEAPY
GSLTAAQCLSALLILSAALFVSIRPLLDRKLS
>Mature_271_residues
TVAPAAQLSQETLALTKRLFVQLQRRPSTLVAGVLQPLIWLVLFGALFANAPDGLIPGGVSYGRFLGAGVIVFTAFSAAL
NAGLPVMFDREFGFLNRLLVAPLRSRYSIVLASVLYITSLSLVQSLAIMAAAWGLGYGWPGGAGLLVVLLTLLLLVAAVT
ALSLGLAFALPGHIELIAVIFVANLPLLFASTALAPISFMPSWLGWLAALNPLTFAIEPIRAAYLGQFSLNAVVLEAPYG
SLTAAQCLSALLILSAALFVSIRPLLDRKLS

Specific function: Unknown

COG id: COG0842

COG function: function code V; ABC-type multidrug transport system, permease component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28643; Mature: 28511

Theoretical pI: Translated: 10.03; Mature: 10.03

Prosite motif: PS51012 ABC_TM2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVAPAAQLSQETLALTKRLFVQLQRRPSTLVAGVLQPLIWLVLFGALFANAPDGLIPGG
CCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
VSYGRFLGAGVIVFTAFSAALNAGLPVMFDREFGFLNRLLVAPLRSRYSIVLASVLYITS
CHHHHHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSLVQSLAIMAAAWGLGYGWPGGAGLLVVLLTLLLLVAAVTALSLGLAFALPGHIELIAV
HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
IFVANLPLLFASTALAPISFMPSWLGWLAALNPLTFAIEPIRAAYLGQFSLNAVVLEAPY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCEEEEECCC
GSLTAAQCLSALLILSAALFVSIRPLLDRKLS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TVAPAAQLSQETLALTKRLFVQLQRRPSTLVAGVLQPLIWLVLFGALFANAPDGLIPGG
CCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
VSYGRFLGAGVIVFTAFSAALNAGLPVMFDREFGFLNRLLVAPLRSRYSIVLASVLYITS
CHHHHHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSLVQSLAIMAAAWGLGYGWPGGAGLLVVLLTLLLLVAAVTALSLGLAFALPGHIELIAV
HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
IFVANLPLLFASTALAPISFMPSWLGWLAALNPLTFAIEPIRAAYLGQFSLNAVVLEAPY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCEEEEECCC
GSLTAAQCLSALLILSAALFVSIRPLLDRKLS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA