| Definition | Synechococcus sp. RCC307, complete genome. |
|---|---|
| Accession | NC_009482 |
| Length | 2,224,914 |
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The map label for this gene is citT [C]
Identifier: 148241749
GI number: 148241749
Start: 589646
End: 591478
Strand: Direct
Name: citT [C]
Synonym: SynRCC307_0650
Alternate gene names: 148241749
Gene position: 589646-591478 (Clockwise)
Preceding gene: 148241748
Following gene: 148241751
Centisome position: 26.5
GC content: 60.01
Gene sequence:
>1833_bases GTGCCTGAAGCCGCTGGATTTCTTGCTGCTGCCAGCACGCCGCACGGGTTAATCACCCTGCTGGTGTTTGCCGTTTCGCT GGTTCTGTTCATCAGCGGTTGGTTGGCGCCTGAGCTCACGGGCCTCTTGGCTGTGGCGCTGCTGGTCAGCTTTGGCGTGC TGGACCCGCAGCAGGCGGTCAAGGGGTTTGGCAGCCCGGCCCTCATCACCTTGATGGGTTTGTTTGCCCTTTCGGCGGGC CTGTTCCGCAGCGGCGGGGTGGATCGCTTGCGGGCGATTCTCGGCTCGGAATCCGTGCGCACGCCGCGGCGCATGATCCT GCTGCTGGTGGCGGTGGTCTCGCCGCTGTCGGGCTTCATTCCCAATACACCGATAGTGGCCACCCTGCTGCCGGTGCTTG AGAACTGGTGCCATCGCCGCGGAATTTCCCCCTCGAAGGTGATGCTGCCGATGTCGTTTGCCGTGGTGATCGGCGGCACC ATCACCCTGCTGGGCACCTCCACCAACCTGCTGGCCAGTGATGTCAGCCGGCAGTTGGGTTATGGCGGCATTGATCTGTT TGATTTCACCCCCATCGGCCTGCCCATTTGGCTGCTGGGTGCCCTCTACATGGTGGTGGTGGGTGATCGCTTCCTGCCCG ATCGCGGCCAAGACGATGACCTGATGGCGGCGATGGCCAAGCAGGGCTATTTCACCGAAGTGTTGATCCCGCGGGGCTCG GAGCTGGTGGGCCAGTCACTCCACAACAGCCGCCTGCAGCGCCGCTTTGATGTTGATGTGCTGGAGCTGCACCGCGGCAG TCAGAGCTTTGGTGCGCCCCTGGCTGACTTGGAATTGCAAGCTGGCGATCGCATGCTCTTGCGCTGCCGCAAAGAGGATC TATTGCGCTTGCAGCAGGAGCACACCATTGCGCTTGCTCCTATTTCACCAGTTGCTTTGTCCGCTTCTGAGAAAGCCCAA CAAATGCCCTCTGTCGGAAGAAAAAGACTGGTTGAAGTCTTACTGCCTGCGGGTTCAAATATCGCTGGGAGCAGTGTTCG TGAGCTGCGCTTCCGGCAGCGTTACAACGCCACGCTCTTAGCTGTAAGACGTGGGCAGGAAGTGATTAAAGATTTGCTTG GAAAAGTTGTTCTCCAGGCTGGTGATGTTCTCCTGATACAGGCGCCGACAGACACAATCCGTGGTCTGCAGAACAGTAAT GACCTGGTGCTGCTCGATGAACTTGAGAAAGATCTGCCTACCACCAGCCGCAAAGGCATCGCCATCGGCATCTGCATCGC TGTGATCCTGCTGCCGATGCTGCAGGTTTTGGATCTGATGGCGTCGGTGCTGTTTGGCGTCGTGCTGATGGTGGCCACCG GTTGCCTCAGGCCGGGTGAGTTGCAACGGGCGATTCGCTGGGACGTGATCCTGCTGCTGGGTTCGATCGTCTGCTTCAGC GTGGCGATGCAAAGCACCGGTTTGGCCAGGGGGTTGGCGGTTGACCTGCTGCAGTCACTGCAGGGTTGGCCCAACTACTT GGTGCTGATGGTGGTGTTCCTGTTGGCCCAGCTGTTCACCGAGACCCTCACCAATGGCGCCACCGTGGTGTTGCTCATCC CAATTGCCACCGAGTTGGCCAAAGGCTTGGCCCTGCCGCCGATGGCTTTCATCTACGCCATCTTGTTTGCGGCCAGCCTC AGCTTCCTGACGCCGATTGGCTACCAGTGCAACTTGATGGTGATGGGGCCTGGTCGCTATCGCTTCTTTGACATGACCCG CTACGGGGCACCGCTCACCATTGGCCTCACGCTGTTAACCCCCTGGCTGATCTGCCGCCACTTCGGCCTCTAG
Upstream 100 bases:
>100_bases ATCCCGGTGGAGATGATCGAGATCCAAAGCGGCGCCTACCTTGGTGAAGACGACATCGTCCGCCTCGAAGATGTCTACGG CCGCTCGACGGCCGTAAGCC
Downstream 100 bases:
>100_bases CTGCTCTGTTGGTGCAGGCAGAGGGCGCAGCAGCCCCAGCGCTCAATTTCGCCACTGGGGCTGGGGGCGCCGCAGCGGGG GCAGTCGGTGGAGCTTCCGG
Product: di/tricarboxylate transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 610; Mature: 609
Protein sequence:
>610_residues MPEAAGFLAAASTPHGLITLLVFAVSLVLFISGWLAPELTGLLAVALLVSFGVLDPQQAVKGFGSPALITLMGLFALSAG LFRSGGVDRLRAILGSESVRTPRRMILLLVAVVSPLSGFIPNTPIVATLLPVLENWCHRRGISPSKVMLPMSFAVVIGGT ITLLGTSTNLLASDVSRQLGYGGIDLFDFTPIGLPIWLLGALYMVVVGDRFLPDRGQDDDLMAAMAKQGYFTEVLIPRGS ELVGQSLHNSRLQRRFDVDVLELHRGSQSFGAPLADLELQAGDRMLLRCRKEDLLRLQQEHTIALAPISPVALSASEKAQ QMPSVGRKRLVEVLLPAGSNIAGSSVRELRFRQRYNATLLAVRRGQEVIKDLLGKVVLQAGDVLLIQAPTDTIRGLQNSN DLVLLDELEKDLPTTSRKGIAIGICIAVILLPMLQVLDLMASVLFGVVLMVATGCLRPGELQRAIRWDVILLLGSIVCFS VAMQSTGLARGLAVDLLQSLQGWPNYLVLMVVFLLAQLFTETLTNGATVVLLIPIATELAKGLALPPMAFIYAILFAASL SFLTPIGYQCNLMVMGPGRYRFFDMTRYGAPLTIGLTLLTPWLICRHFGL
Sequences:
>Translated_610_residues MPEAAGFLAAASTPHGLITLLVFAVSLVLFISGWLAPELTGLLAVALLVSFGVLDPQQAVKGFGSPALITLMGLFALSAG LFRSGGVDRLRAILGSESVRTPRRMILLLVAVVSPLSGFIPNTPIVATLLPVLENWCHRRGISPSKVMLPMSFAVVIGGT ITLLGTSTNLLASDVSRQLGYGGIDLFDFTPIGLPIWLLGALYMVVVGDRFLPDRGQDDDLMAAMAKQGYFTEVLIPRGS ELVGQSLHNSRLQRRFDVDVLELHRGSQSFGAPLADLELQAGDRMLLRCRKEDLLRLQQEHTIALAPISPVALSASEKAQ QMPSVGRKRLVEVLLPAGSNIAGSSVRELRFRQRYNATLLAVRRGQEVIKDLLGKVVLQAGDVLLIQAPTDTIRGLQNSN DLVLLDELEKDLPTTSRKGIAIGICIAVILLPMLQVLDLMASVLFGVVLMVATGCLRPGELQRAIRWDVILLLGSIVCFS VAMQSTGLARGLAVDLLQSLQGWPNYLVLMVVFLLAQLFTETLTNGATVVLLIPIATELAKGLALPPMAFIYAILFAASL SFLTPIGYQCNLMVMGPGRYRFFDMTRYGAPLTIGLTLLTPWLICRHFGL >Mature_609_residues PEAAGFLAAASTPHGLITLLVFAVSLVLFISGWLAPELTGLLAVALLVSFGVLDPQQAVKGFGSPALITLMGLFALSAGL FRSGGVDRLRAILGSESVRTPRRMILLLVAVVSPLSGFIPNTPIVATLLPVLENWCHRRGISPSKVMLPMSFAVVIGGTI TLLGTSTNLLASDVSRQLGYGGIDLFDFTPIGLPIWLLGALYMVVVGDRFLPDRGQDDDLMAAMAKQGYFTEVLIPRGSE LVGQSLHNSRLQRRFDVDVLELHRGSQSFGAPLADLELQAGDRMLLRCRKEDLLRLQQEHTIALAPISPVALSASEKAQQ MPSVGRKRLVEVLLPAGSNIAGSSVRELRFRQRYNATLLAVRRGQEVIKDLLGKVVLQAGDVLLIQAPTDTIRGLQNSND LVLLDELEKDLPTTSRKGIAIGICIAVILLPMLQVLDLMASVLFGVVLMVATGCLRPGELQRAIRWDVILLLGSIVCFSV AMQSTGLARGLAVDLLQSLQGWPNYLVLMVVFLLAQLFTETLTNGATVVLLIPIATELAKGLALPPMAFIYAILFAASLS FLTPIGYQCNLMVMGPGRYRFFDMTRYGAPLTIGLTLLTPWLICRHFGL
Specific function: Unknown
COG id: COG0471
COG function: function code P; Di- and tricarboxylate transporters
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 RCK C-terminal domains [H]
Homologues:
Organism=Escherichia coli, GI1788629, Length=594, Percent_Identity=29.1245791245791, Blast_Score=205, Evalue=6e-54,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001898 - InterPro: IPR006037 [H]
Pfam domain/function: PF00939 Na_sulph_symp; PF02080 TrkA_C [H]
EC number: NA
Molecular weight: Translated: 65846; Mature: 65715
Theoretical pI: Translated: 8.65; Mature: 8.65
Prosite motif: PS01271 NA_SULFATE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPEAAGFLAAASTPHGLITLLVFAVSLVLFISGWLAPELTGLLAVALLVSFGVLDPQQAV CCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH KGFGSPALITLMGLFALSAGLFRSGGVDRLRAILGSESVRTPRRMILLLVAVVSPLSGFI HCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCC PNTPIVATLLPVLENWCHRRGISPSKVMLPMSFAVVIGGTITLLGTSTNLLASDVSRQLG CCCCHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHCCEEEEEECCHHHHHHHHHHHCC YGGIDLFDFTPIGLPIWLLGALYMVVVGDRFLPDRGQDDDLMAAMAKQGYFTEVLIPRGS CCCEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCEEEEECCCCH ELVGQSLHNSRLQRRFDVDVLELHRGSQSFGAPLADLELQAGDRMLLRCRKEDLLRLQQE HHHHHHHHHHHHHHHCCCHHHHHHCCCHHHCCCHHHCCCCCCCHHHHHHHHHHHHHHHHC HTIALAPISPVALSASEKAQQMPSVGRKRLVEVLLPAGSNIAGSSVRELRFRQRYNATLL CEEEEECCCCHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCHHH AVRRGQEVIKDLLGKVVLQAGDVLLIQAPTDTIRGLQNSNDLVLLDELEKDLPTTSRKGI HHHCCHHHHHHHHHHHHHHCCCEEEEECCCHHHHCCCCCCCEEEEEHHHHCCCCCCCCCH AIGICIAVILLPMLQVLDLMASVLFGVVLMVATGCLRPGELQRAIRWDVILLLGSIVCFS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH VAMQSTGLARGLAVDLLQSLQGWPNYLVLMVVFLLAQLFTETLTNGATVVLLIPIATELA HHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHH KGLALPPMAFIYAILFAASLSFLTPIGYQCNLMVMGPGRYRFFDMTRYGAPLTIGLTLLT CCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCEEEEEHHHCCCCCEEHHHHHH PWLICRHFGL HHHHHHHCCC >Mature Secondary Structure PEAAGFLAAASTPHGLITLLVFAVSLVLFISGWLAPELTGLLAVALLVSFGVLDPQQAV CCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH KGFGSPALITLMGLFALSAGLFRSGGVDRLRAILGSESVRTPRRMILLLVAVVSPLSGFI HCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCC PNTPIVATLLPVLENWCHRRGISPSKVMLPMSFAVVIGGTITLLGTSTNLLASDVSRQLG CCCCHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHCCEEEEEECCHHHHHHHHHHHCC YGGIDLFDFTPIGLPIWLLGALYMVVVGDRFLPDRGQDDDLMAAMAKQGYFTEVLIPRGS CCCEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCEEEEECCCCH ELVGQSLHNSRLQRRFDVDVLELHRGSQSFGAPLADLELQAGDRMLLRCRKEDLLRLQQE HHHHHHHHHHHHHHHCCCHHHHHHCCCHHHCCCHHHCCCCCCCHHHHHHHHHHHHHHHHC HTIALAPISPVALSASEKAQQMPSVGRKRLVEVLLPAGSNIAGSSVRELRFRQRYNATLL CEEEEECCCCHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCHHH AVRRGQEVIKDLLGKVVLQAGDVLLIQAPTDTIRGLQNSNDLVLLDELEKDLPTTSRKGI HHHCCHHHHHHHHHHHHHHCCCEEEEECCCHHHHCCCCCCCEEEEEHHHHCCCCCCCCCH AIGICIAVILLPMLQVLDLMASVLFGVVLMVATGCLRPGELQRAIRWDVILLLGSIVCFS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH VAMQSTGLARGLAVDLLQSLQGWPNYLVLMVVFLLAQLFTETLTNGATVVLLIPIATELA HHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHH KGLALPPMAFIYAILFAASLSFLTPIGYQCNLMVMGPGRYRFFDMTRYGAPLTIGLTLLT CCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCEEEEEHHHCCCCCEEHHHHHH PWLICRHFGL HHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]