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The map label for this gene is wcaJ [C]

Identifier: 148241691

GI number: 148241691

Start: 526780

End: 527475

Strand: Direct

Name: wcaJ [C]

Synonym: SynRCC307_0592

Alternate gene names: 148241691

Gene position: 526780-527475 (Clockwise)

Preceding gene: 148241690

Following gene: 148241697

Centisome position: 23.68

GC content: 60.92

Gene sequence:

>696_bases
ATGCTTTCAAGACCAGCCAGCCTTCTGAATACAGGCGATCGCCTTGGGCTGAGTGGTCTTGTACAGCGTCGTGTCCGTCC
GCTGGCAACGCTGAAGCGCAGCGGTGACATTGCGTTTTCGCTGGCCATGTTGAGCCTGGGTTCCCCAGTGTTGCTCAGCG
TGGCCCTGCTGGTGAAGCTCACCTCCCCGGGCCCCGTCTTTTTCGTTCAAAAGCGCATAGGGCGCCGTTTTCAGCGCTTT
GGCTGCATCAAGTTCCGCACCATGGAGCTCGATGCGGATCGCCGGTTACAGGAGCTGCTGGAGTCCTGCCCCCAGCTGCG
GGCGGAGTTTGAAAAAGACCACAAGCTGCGCCGTGATCCGCGCATCACGCCGATTGGTCAGTTTTTGCGGCTCACCAGCC
TCGATGAGCTGCCCCAGTTCTGGAACATCCTGCGCGGTGAAATGAGCGTGGTGGGTCCGCGCCCCATCGTTGAGCAGGAA
ATTCCCCGTTATGGCCCGGCCATGGAGCAGGTGCTGAGCGTGCGCCCTGGCCTCACGGGTCTGTGGCAAGTGTCTGGCCG
CAACAACGTCAGCTATCAGCGCCGCGTGCTGCTCGATCTCACCTATGTGAACCGCCGCAGCCTCGGCCTTGATTTGCGCA
TCCTTTGGCGCACGGTCTTGGTGGTGCTGTTCCCTGCCAACAAGGGCGCTTACTAA

Upstream 100 bases:

>100_bases
GGATCGGTTCCCACTCCGCTGTGCCTGTGGGGTAGGTGATCCAGATCCGGTGGGATTGTCACATGACAGTCCGTACGGTG
CAGTCAGGTCTGTTTACGCG

Downstream 100 bases:

>100_bases
GCCAGCAGAGCCACCACGCCGCTCAGTCCTAGCCACAGCAGAGCGCTGCGTTGGCTCACATCCAAGATGGCCTGAACGCC
TTTCTCATCAGCCGCTCGCC

Product: sugar transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 231; Mature: 231

Protein sequence:

>231_residues
MLSRPASLLNTGDRLGLSGLVQRRVRPLATLKRSGDIAFSLAMLSLGSPVLLSVALLVKLTSPGPVFFVQKRIGRRFQRF
GCIKFRTMELDADRRLQELLESCPQLRAEFEKDHKLRRDPRITPIGQFLRLTSLDELPQFWNILRGEMSVVGPRPIVEQE
IPRYGPAMEQVLSVRPGLTGLWQVSGRNNVSYQRRVLLDLTYVNRRSLGLDLRILWRTVLVVLFPANKGAY

Sequences:

>Translated_231_residues
MLSRPASLLNTGDRLGLSGLVQRRVRPLATLKRSGDIAFSLAMLSLGSPVLLSVALLVKLTSPGPVFFVQKRIGRRFQRF
GCIKFRTMELDADRRLQELLESCPQLRAEFEKDHKLRRDPRITPIGQFLRLTSLDELPQFWNILRGEMSVVGPRPIVEQE
IPRYGPAMEQVLSVRPGLTGLWQVSGRNNVSYQRRVLLDLTYVNRRSLGLDLRILWRTVLVVLFPANKGAY
>Mature_231_residues
MLSRPASLLNTGDRLGLSGLVQRRVRPLATLKRSGDIAFSLAMLSLGSPVLLSVALLVKLTSPGPVFFVQKRIGRRFQRF
GCIKFRTMELDADRRLQELLESCPQLRAEFEKDHKLRRDPRITPIGQFLRLTSLDELPQFWNILRGEMSVVGPRPIVEQE
IPRYGPAMEQVLSVRPGLTGLWQVSGRNNVSYQRRVLLDLTYVNRRSLGLDLRILWRTVLVVLFPANKGAY

Specific function: May function as a sugar transferase [H]

COG id: COG2148

COG function: function code M; Sugar transferases involved in lipopolysaccharide synthesis

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial sugar transferase family [H]

Homologues:

Organism=Escherichia coli, GI1788360, Length=210, Percent_Identity=38.0952380952381, Blast_Score=124, Evalue=5e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003362
- InterPro:   IPR017475
- InterPro:   IPR017472 [H]

Pfam domain/function: PF02397 Bac_transf [H]

EC number: NA

Molecular weight: Translated: 26304; Mature: 26304

Theoretical pI: Translated: 11.69; Mature: 11.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSRPASLLNTGDRLGLSGLVQRRVRPLATLKRSGDIAFSLAMLSLGSPVLLSVALLVKL
CCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHC
TSPGPVFFVQKRIGRRFQRFGCIKFRTMELDADRRLQELLESCPQLRAEFEKDHKLRRDP
CCCCCEEHHHHHHHHHHHHHCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
RITPIGQFLRLTSLDELPQFWNILRGEMSVVGPRPIVEQEIPRYGPAMEQVLSVRPGLTG
CCCHHHHHHHHHCHHHHHHHHHHHHCCHHHCCCCCCHHHHCCCCCHHHHHHHHHCCCCCE
LWQVSGRNNVSYQRRVLLDLTYVNRRSLGLDLRILWRTVLVVLFPANKGAY
EEEECCCCCCCHHHHHEEHHHHHCCCCCCCHHHHHHHHHHHHEECCCCCCC
>Mature Secondary Structure
MLSRPASLLNTGDRLGLSGLVQRRVRPLATLKRSGDIAFSLAMLSLGSPVLLSVALLVKL
CCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHC
TSPGPVFFVQKRIGRRFQRFGCIKFRTMELDADRRLQELLESCPQLRAEFEKDHKLRRDP
CCCCCEEHHHHHHHHHHHHHCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
RITPIGQFLRLTSLDELPQFWNILRGEMSVVGPRPIVEQEIPRYGPAMEQVLSVRPGLTG
CCCHHHHHHHHHCHHHHHHHHHHHHCCHHHCCCCCCHHHHCCCCCHHHHHHHHHCCCCCE
LWQVSGRNNVSYQRRVLLDLTYVNRRSLGLDLRILWRTVLVVLFPANKGAY
EEEECCCCCCCHHHHHEEHHHHHCCCCCCCHHHHHHHHHHHHEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]