| Definition | Synechococcus sp. RCC307, complete genome. |
|---|---|
| Accession | NC_009482 |
| Length | 2,224,914 |
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The map label for this gene is 148241653
Identifier: 148241653
GI number: 148241653
Start: 491699
End: 492094
Strand: Direct
Name: 148241653
Synonym: SynRCC307_0554
Alternate gene names: NA
Gene position: 491699-492094 (Clockwise)
Preceding gene: 148241652
Following gene: 148241654
Centisome position: 22.1
GC content: 60.61
Gene sequence:
>396_bases GTGCTGGTGAGCGCCGTATTGCTGGGGATCTTCAGCAGCCTGGGCCTTCAGCTGTCGGGTTCCATCGGCCGAGCGGCCCA GCAGCAACAGCAATCGGCGGACCAGCAGCATTGGCTGGCCTTGCAACTGCAGCGTGATGCGGGCTTGTTGATTAGGCAGG GGGCGCTGCTGGCAGTGGATTGCAGCAACGAGAAACAACGCGAGCAGGGCTTGCTGCAGCTGCAGGCTTTGCTTGAGCAG GTTGGCTCCATCGAACCGGCCGAGACGTTCTCAACGCAACGGCAACTCCAGGTTGCTGATGGGCTTTTGCAACTGCAAGT GAGCATTGGCGAGCTGCAACGCCAGCGCGAGTTCAGCCTTCAAGGCTTAGGGGCCTGCATCGATGAGCTTGGTTGA
Upstream 100 bases:
>100_bases CCCTGCAAGGAATGCTGAGCCAACAGCGCGAACTCAAGCGCGACCAAAAAGCCGACGCCGAGTTCTCAGCCGTGATGCGG CAGGCTTTGGATTAACCGAG
Downstream 100 bases:
>100_bases GCTGCTCACTGCTGTGGCGATTGTGGGGATCCTGGCGGGCACCAGCATCAACGCCAGCCGCAGGCCGCTTGCCCATCAGC AGTTGCTGGCCGCGGCGCGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 131; Mature: 131
Protein sequence:
>131_residues MLVSAVLLGIFSSLGLQLSGSIGRAAQQQQQSADQQHWLALQLQRDAGLLIRQGALLAVDCSNEKQREQGLLQLQALLEQ VGSIEPAETFSTQRQLQVADGLLQLQVSIGELQRQREFSLQGLGACIDELG
Sequences:
>Translated_131_residues MLVSAVLLGIFSSLGLQLSGSIGRAAQQQQQSADQQHWLALQLQRDAGLLIRQGALLAVDCSNEKQREQGLLQLQALLEQ VGSIEPAETFSTQRQLQVADGLLQLQVSIGELQRQREFSLQGLGACIDELG >Mature_131_residues MLVSAVLLGIFSSLGLQLSGSIGRAAQQQQQSADQQHWLALQLQRDAGLLIRQGALLAVDCSNEKQREQGLLQLQALLEQ VGSIEPAETFSTQRQLQVADGLLQLQVSIGELQRQREFSLQGLGACIDELG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14207; Mature: 14207
Theoretical pI: Translated: 4.40; Mature: 4.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLVSAVLLGIFSSLGLQLSGSIGRAAQQQQQSADQQHWLALQLQRDAGLLIRQGALLAVD CHHHHHHHHHHHHHCCEECCCHHHHHHHHHHCCHHHHHHHEEECCCCCEEEECCCEEEEE CSNEKQREQGLLQLQALLEQVGSIEPAETFSTQRQLQVADGLLQLQVSIGELQRQREFSL CCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QGLGACIDELG HHHHHHHHHCC >Mature Secondary Structure MLVSAVLLGIFSSLGLQLSGSIGRAAQQQQQSADQQHWLALQLQRDAGLLIRQGALLAVD CHHHHHHHHHHHHHCCEECCCHHHHHHHHHHCCHHHHHHHEEECCCCCEEEECCCEEEEE CSNEKQREQGLLQLQALLEQVGSIEPAETFSTQRQLQVADGLLQLQVSIGELQRQREFSL CCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QGLGACIDELG HHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA