| Definition | Synechococcus sp. RCC307, complete genome. |
|---|---|
| Accession | NC_009482 |
| Length | 2,224,914 |
Click here to switch to the map view.
The map label for this gene is cysQ [H]
Identifier: 148241641
GI number: 148241641
Start: 478440
End: 479357
Strand: Direct
Name: cysQ [H]
Synonym: SynRCC307_0542
Alternate gene names: 148241641
Gene position: 478440-479357 (Clockwise)
Preceding gene: 148241638
Following gene: 148241648
Centisome position: 21.5
GC content: 64.92
Gene sequence:
>918_bases ATGGCGCTCGCCTGTGATCAATCCATGATGCCCACCACCGAAGCCATCCTTGTGGTACTGCGGCGTTTGGTTTGGGAGTC GGCCGATATCCTGCGGGCCTATGCCCGCTCCGAGCAGCCTCCCTTTGGCTATCCCCCCGCCTTGAGTGTGGATAACGGCG GCGAAGGCCCGGTGAGCGCGGCGGATCTGGCGGTGAATCAACACCTGCTCGATGGCTTTCGCAGCAACTTCCCGGATGCC CCCTGGGCTCTGCTCAGCGAAGAAACCGCTGCGGAGCAGCTCACCGCTGGTGTTCCGCTGGATGCCGAATGGCTGTGGAT CCTCGATCCGCTCGATGGCACCAAGGATTTCCTGCAGGGCACCGGCGAGTACGCCGTGCACTTGGCGTTAGTGCACCACC AACGGCCGGTGCTGGGGGTGGTGCTCCAGCCCGAGCGGGAAGAGGTGTGGTTTGGCCTGGTGGATGAACAGAAGGCCTGG TGTGAAACCCGCGATGGCACGCAGCGCCCCGCCCAGCTCAGCAGCCGCGTCCAGCGCTCCGATTTGGTGTTGGTGGCGAG CCGCAACCACCGCGATGAGCGACTCGAGCGTTTGCTGGAGGCGTTGGCTTTGGGCGACACCAAGGCGATTGGCAGTGTCG GCGGCAAGGTGGCCACGATCCTGCGTGGGGAGACCGATGTCTACATCTCCCTGTCGGGCCGCAGCGCCCCGAAGGATTGG GACATGGCGGCTCCAGAAGCGGTGCTGCTGGCTGCGGGCGGTGCCTTCAGCCACGCCGATGGCGCGCCCTTGCTGTACAA CGACGGCGATGTGCGCCAAGCCGGCTGCCTGATCGCCAGCAATGGAAAAGCCCAGGCCGAGCTCTGTGAGCTGGCCCGGG CTTGCCTGGCTGAGATTGATCCAGGCTTTGCGGTTTAG
Upstream 100 bases:
>100_bases AACAGCTGCCAGCAGCTGCTGGGCCCGCGGGGAGAGGTCGCCGCGGTGGCCGATCGGTGTTCCCACCAGATAGAGAACCC CGGGGCTGGGCTCCTTCACA
Downstream 100 bases:
>100_bases GACTCGCCGATCGGCAGGATCACAGTGGGCTGAGGATCGGAGCCGTCCTGGGGCACACCGCGCAGGGTGAGGTTGATGCG GCCGCGGTTGTCGATCTCGC
Product: 3'-phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase
Products: NA
Alternate protein names: 3'(2'),5-bisphosphonucleoside 3'(2')-phosphohydrolase; 3'-phosphoadenosine 5'-phosphate phosphatase; PAP phosphatase; DPNPase [H]
Number of amino acids: Translated: 305; Mature: 304
Protein sequence:
>305_residues MALACDQSMMPTTEAILVVLRRLVWESADILRAYARSEQPPFGYPPALSVDNGGEGPVSAADLAVNQHLLDGFRSNFPDA PWALLSEETAAEQLTAGVPLDAEWLWILDPLDGTKDFLQGTGEYAVHLALVHHQRPVLGVVLQPEREEVWFGLVDEQKAW CETRDGTQRPAQLSSRVQRSDLVLVASRNHRDERLERLLEALALGDTKAIGSVGGKVATILRGETDVYISLSGRSAPKDW DMAAPEAVLLAAGGAFSHADGAPLLYNDGDVRQAGCLIASNGKAQAELCELARACLAEIDPGFAV
Sequences:
>Translated_305_residues MALACDQSMMPTTEAILVVLRRLVWESADILRAYARSEQPPFGYPPALSVDNGGEGPVSAADLAVNQHLLDGFRSNFPDA PWALLSEETAAEQLTAGVPLDAEWLWILDPLDGTKDFLQGTGEYAVHLALVHHQRPVLGVVLQPEREEVWFGLVDEQKAW CETRDGTQRPAQLSSRVQRSDLVLVASRNHRDERLERLLEALALGDTKAIGSVGGKVATILRGETDVYISLSGRSAPKDW DMAAPEAVLLAAGGAFSHADGAPLLYNDGDVRQAGCLIASNGKAQAELCELARACLAEIDPGFAV >Mature_304_residues ALACDQSMMPTTEAILVVLRRLVWESADILRAYARSEQPPFGYPPALSVDNGGEGPVSAADLAVNQHLLDGFRSNFPDAP WALLSEETAAEQLTAGVPLDAEWLWILDPLDGTKDFLQGTGEYAVHLALVHHQRPVLGVVLQPEREEVWFGLVDEQKAWC ETRDGTQRPAQLSSRVQRSDLVLVASRNHRDERLERLLEALALGDTKAIGSVGGKVATILRGETDVYISLSGRSAPKDWD MAAPEAVLLAAGGAFSHADGAPLLYNDGDVRQAGCLIASNGKAQAELCELARACLAEIDPGFAV
Specific function: Converts 3'(2')-phosphoadenosine 5'-phosphate (PAP) to AMP. May also convert adenosine 3'-phosphate 5'-phosphosulfate (PAPS) to adenosine 5'-phosphosulfate (APS) [H]
COG id: COG1218
COG function: function code P; 3'-Phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase
Gene ontology:
Cell location: Cytoplasm. Cell inner membrane; Peripheral membrane protein; Cytoplasmic side [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the inositol monophosphatase family [H]
Homologues:
Organism=Escherichia coli, GI1790659, Length=228, Percent_Identity=35.9649122807018, Blast_Score=96, Evalue=2e-21, Organism=Caenorhabditis elegans, GI71995905, Length=250, Percent_Identity=28, Blast_Score=70, Evalue=1e-12, Organism=Caenorhabditis elegans, GI71995897, Length=250, Percent_Identity=28, Blast_Score=70, Evalue=1e-12, Organism=Drosophila melanogaster, GI24664922, Length=225, Percent_Identity=24, Blast_Score=67, Evalue=2e-11, Organism=Drosophila melanogaster, GI24664926, Length=225, Percent_Identity=24, Blast_Score=66, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006240 - InterPro: IPR020583 - InterPro: IPR000760 - InterPro: IPR020550 [H]
Pfam domain/function: PF00459 Inositol_P [H]
EC number: =3.1.3.7 [H]
Molecular weight: Translated: 32857; Mature: 32726
Theoretical pI: Translated: 4.39; Mature: 4.39
Prosite motif: PS00630 IMP_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALACDQSMMPTTEAILVVLRRLVWESADILRAYARSEQPPFGYPPALSVDNGGEGPVSA CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCCCCCCCHH ADLAVNQHLLDGFRSNFPDAPWALLSEETAAEQLTAGVPLDAEWLWILDPLDGTKDFLQG HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHC TGEYAVHLALVHHQRPVLGVVLQPEREEVWFGLVDEQKAWCETRDGTQRPAQLSSRVQRS CCCCEEEEEEECCCCCEEEEEECCCCCCEEEEECCCHHHHHCCCCCCCCHHHHHHHHHHC DLVLVASRNHRDERLERLLEALALGDTKAIGSVGGKVATILRGETDVYISLSGRSAPKDW CEEEEECCCCHHHHHHHHHHHHHCCCCHHHHHCCCEEEEEEECCCEEEEEECCCCCCCCC DMAAPEAVLLAAGGAFSHADGAPLLYNDGDVRQAGCLIASNGKAQAELCELARACLAEID CCCCCCEEEEECCCCCCCCCCCCEEECCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHCC PGFAV CCCCC >Mature Secondary Structure ALACDQSMMPTTEAILVVLRRLVWESADILRAYARSEQPPFGYPPALSVDNGGEGPVSA CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCCCCCCCHH ADLAVNQHLLDGFRSNFPDAPWALLSEETAAEQLTAGVPLDAEWLWILDPLDGTKDFLQG HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHC TGEYAVHLALVHHQRPVLGVVLQPEREEVWFGLVDEQKAWCETRDGTQRPAQLSSRVQRS CCCCEEEEEEECCCCCEEEEEECCCCCCEEEEECCCHHHHHCCCCCCCCHHHHHHHHHHC DLVLVASRNHRDERLERLLEALALGDTKAIGSVGGKVATILRGETDVYISLSGRSAPKDW CEEEEECCCCHHHHHHHHHHHHHCCCCHHHHHCCCEEEEEEECCCEEEEEECCCCCCCCC DMAAPEAVLLAAGGAFSHADGAPLLYNDGDVRQAGCLIASNGKAQAELCELARACLAEID CCCCCCEEEEECCCCCCCCCCCCEEECCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHCC PGFAV CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]