| Definition | Synechococcus sp. RCC307, complete genome. |
|---|---|
| Accession | NC_009482 |
| Length | 2,224,914 |
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The map label for this gene is 148241638
Identifier: 148241638
GI number: 148241638
Start: 476582
End: 477352
Strand: Direct
Name: 148241638
Synonym: SynRCC307_0539
Alternate gene names: NA
Gene position: 476582-477352 (Clockwise)
Preceding gene: 148241635
Following gene: 148241641
Centisome position: 21.42
GC content: 62.65
Gene sequence:
>771_bases ATGGCCCCGGCCCGCCTCAGCGACAGCCAGAAGCAGGAGCTGGTGAGCCAGTTCAAGGCTGGCGTGACAGCGGCGGCGCT TGCCGAAGCGTTTGGCTGCAGCCCCAACACGGTGAGCCGCACCGTGAAAGCTCTGCTCAGCCCCGAGGAGTACGAAGGCC TCAAGCAGAAGCGCAGTGGCCGCGGCACTGCTGCTGTTGCGGTGAAAGAAGACGAGCCCAAGGCAGACGAACCCGAAACT GAGACCGCACCAGAGGCCCCTTCCCCTGAGGCTGAACTAGAAGCTGATGAGCCGCTGGAGGGCAGTAGCTCTTTGGCCCT TGATGACGCCGATGATTTCGGCGCTGATGACAGCGACGAGGAGCTTGATGAGCTCAGCGACGACGACAGCGTTGCTGAAA CCTTTGTGGCGATTGCCCCGCTGCCTGGTCTCGGGGTGATTGATGGCGGGGCCCCTTGCGTCAGTAAGCCGCTGGTGGAT GGAAGCTTGCCTTCCACGGTGTATCTGTTGGTCGACCGCGACGTGGAGCTCAAAGGCACCCCCGTTAAAGACTTCAGCGA GCTGGGTGCTGTGGCGGCCACTGAGATGGAGCACAAGGCGATTGCGCTGTTCAGCAATCCCCGCCAGGCCAAGCGACAGT GTGGCCGCAGTCAGCGGGTGATCAAGGTGCCGGATTCCGGCGTCTTTGGCCGCACCGCGCCATTCATCCTGGCCCAGGGC ATCAGCCGTATCGTTTTAGAAGGCAGCCTCTACGCCATCCCTGGCGCTTGA
Upstream 100 bases:
>100_bases TGCTTAGAAGGCAGCTGCTCTATCCAGCTGAGCTAAGGGAGCAGACACTCCAATCCTGCCAGTGAAGCTGCTTAGATTGG AGGGCTGTGAAAGCTCCCCA
Downstream 100 bases:
>100_bases GTTAGCGCCGCAGCAGCGCGGCAACGCTGCCGCCGCTGAACACCCCGCAGACCAGGGCGATGCCCACCACAAAGCCTGTG GGCAGTGGGGCGCTTTGGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 256; Mature: 255
Protein sequence:
>256_residues MAPARLSDSQKQELVSQFKAGVTAAALAEAFGCSPNTVSRTVKALLSPEEYEGLKQKRSGRGTAAVAVKEDEPKADEPET ETAPEAPSPEAELEADEPLEGSSSLALDDADDFGADDSDEELDELSDDDSVAETFVAIAPLPGLGVIDGGAPCVSKPLVD GSLPSTVYLLVDRDVELKGTPVKDFSELGAVAATEMEHKAIALFSNPRQAKRQCGRSQRVIKVPDSGVFGRTAPFILAQG ISRIVLEGSLYAIPGA
Sequences:
>Translated_256_residues MAPARLSDSQKQELVSQFKAGVTAAALAEAFGCSPNTVSRTVKALLSPEEYEGLKQKRSGRGTAAVAVKEDEPKADEPET ETAPEAPSPEAELEADEPLEGSSSLALDDADDFGADDSDEELDELSDDDSVAETFVAIAPLPGLGVIDGGAPCVSKPLVD GSLPSTVYLLVDRDVELKGTPVKDFSELGAVAATEMEHKAIALFSNPRQAKRQCGRSQRVIKVPDSGVFGRTAPFILAQG ISRIVLEGSLYAIPGA >Mature_255_residues APARLSDSQKQELVSQFKAGVTAAALAEAFGCSPNTVSRTVKALLSPEEYEGLKQKRSGRGTAAVAVKEDEPKADEPETE TAPEAPSPEAELEADEPLEGSSSLALDDADDFGADDSDEELDELSDDDSVAETFVAIAPLPGLGVIDGGAPCVSKPLVDG SLPSTVYLLVDRDVELKGTPVKDFSELGAVAATEMEHKAIALFSNPRQAKRQCGRSQRVIKVPDSGVFGRTAPFILAQGI SRIVLEGSLYAIPGA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26798; Mature: 26667
Theoretical pI: Translated: 4.09; Mature: 4.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAPARLSDSQKQELVSQFKAGVTAAALAEAFGCSPNTVSRTVKALLSPEEYEGLKQKRSG CCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHCC RGTAAVAVKEDEPKADEPETETAPEAPSPEAELEADEPLEGSSSLALDDADDFGADDSDE CCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCHHCCCCCCHH ELDELSDDDSVAETFVAIAPLPGLGVIDGGAPCVSKPLVDGSLPSTVYLLVDRDVELKGT HHHHCCCCHHHHHHHHHHCCCCCCCEECCCCCHHCCCCCCCCCCCEEEEEEECCCCCCCC PVKDFSELGAVAATEMEHKAIALFSNPRQAKRQCGRSQRVIKVPDSGVFGRTAPFILAQG CCHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHCCCCCCEEECCCCCCCCCHHHHHHHHH ISRIVLEGSLYAIPGA HHHHHHCCCEEECCCC >Mature Secondary Structure APARLSDSQKQELVSQFKAGVTAAALAEAFGCSPNTVSRTVKALLSPEEYEGLKQKRSG CCCCCCCHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHCC RGTAAVAVKEDEPKADEPETETAPEAPSPEAELEADEPLEGSSSLALDDADDFGADDSDE CCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCHHCCCCCCHH ELDELSDDDSVAETFVAIAPLPGLGVIDGGAPCVSKPLVDGSLPSTVYLLVDRDVELKGT HHHHCCCCHHHHHHHHHHCCCCCCCEECCCCCHHCCCCCCCCCCCEEEEEEECCCCCCCC PVKDFSELGAVAATEMEHKAIALFSNPRQAKRQCGRSQRVIKVPDSGVFGRTAPFILAQG CCHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHCCCCCCEEECCCCCCCCCHHHHHHHHH ISRIVLEGSLYAIPGA HHHHHHCCCEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA