Definition Synechococcus sp. RCC307, complete genome.
Accession NC_009482
Length 2,224,914

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The map label for this gene is chrA

Identifier: 148241539

GI number: 148241539

Start: 414765

End: 415334

Strand: Direct

Name: chrA

Synonym: SynRCC307_0440

Alternate gene names: NA

Gene position: 414765-415334 (Clockwise)

Preceding gene: 148241538

Following gene: 148241541

Centisome position: 18.64

GC content: 63.51

Gene sequence:

>570_bases
ATGGTTGATCCCAGCAGCGCTTGGGACACCTGGCTTCAGGTGGTGTGGACCTTCCTGCGCCTGTCGCTGTTTTCCCTCGG
CGGCGGCAACACCTTGCTGGCGGAATACCACCACCTCTCGGTAGAGCGCTTTGGCTGGATCACCAGCTCCCAGTTCGCTG
ACATCTATGCCCTCGCTGAAGCAGCGCCTGGGCCCAGCTCCATGATCGTGGGGCTCTTGGGGCTGGGGGCTGGCTGGGAC
CACGGCCTGGGGTGGGGCCTGTTGTGTGGGGTGAGCGCTGAGGTGGCGGTGTTGCTGCCCTCCACCGTGGTGATGGTGGC
GGCGGCCTTGAGCTGGAACCGGCTCAAAGATGCACCGATTCGCACCGCCTTTGAACGGGGCTTGGGGCCAATCACATTGG
GAATCCTGTTCCATGTGGGCCTCACCGTGCTGCGCACGGCGGACCACAGCGTGGTGGCTTATTTGGTTTCGGCTGTGGTC
TGCGCCTTGATGTTGTTCACGCGCATCTCACCGCTGTATTTCATGGCGGTTGCCGGGGTGCTGGGCGCCATTGGCGTCAT
CCCCAGCTGA

Upstream 100 bases:

>100_bases
ACCTTTGTGGTGCTGGAGTTCAAGGGGATTGGCCTGATCCCGGTGGTGCTGGTGTTGGGGCCGATTGCCATGGCCCTCTA
CTGGCCGCGGCAGCAGCGCC

Downstream 100 bases:

>100_bases
TCGGCACCCCTAATTGGGCGGCACTGATTGCAATCTCATCGCCCTCGAGCCGCGCTTGCTCGGTGACTCCTTCCGGCGGC
GGTTCTTCCGGGCCGCGCGC

Product: chromate transporter

Products: NA

Alternate protein names: ChrA Half Sized-Like Protein; Chromate Efflux Pump; Chromate Transporter Family; Chromate Transporter ChrA; Subunit Of Chromate Transporter

Number of amino acids: Translated: 189; Mature: 189

Protein sequence:

>189_residues
MVDPSSAWDTWLQVVWTFLRLSLFSLGGGNTLLAEYHHLSVERFGWITSSQFADIYALAEAAPGPSSMIVGLLGLGAGWD
HGLGWGLLCGVSAEVAVLLPSTVVMVAAALSWNRLKDAPIRTAFERGLGPITLGILFHVGLTVLRTADHSVVAYLVSAVV
CALMLFTRISPLYFMAVAGVLGAIGVIPS

Sequences:

>Translated_189_residues
MVDPSSAWDTWLQVVWTFLRLSLFSLGGGNTLLAEYHHLSVERFGWITSSQFADIYALAEAAPGPSSMIVGLLGLGAGWD
HGLGWGLLCGVSAEVAVLLPSTVVMVAAALSWNRLKDAPIRTAFERGLGPITLGILFHVGLTVLRTADHSVVAYLVSAVV
CALMLFTRISPLYFMAVAGVLGAIGVIPS
>Mature_189_residues
MVDPSSAWDTWLQVVWTFLRLSLFSLGGGNTLLAEYHHLSVERFGWITSSQFADIYALAEAAPGPSSMIVGLLGLGAGWD
HGLGWGLLCGVSAEVAVLLPSTVVMVAAALSWNRLKDAPIRTAFERGLGPITLGILFHVGLTVLRTADHSVVAYLVSAVV
CALMLFTRISPLYFMAVAGVLGAIGVIPS

Specific function: Unknown

COG id: COG2059

COG function: function code P; Chromate transport protein ChrA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20010; Mature: 20010

Theoretical pI: Translated: 6.34; Mature: 6.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVDPSSAWDTWLQVVWTFLRLSLFSLGGGNTLLAEYHHLSVERFGWITSSQFADIYALAE
CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
AAPGPSSMIVGLLGLGAGWDHGLGWGLLCGVSAEVAVLLPSTVVMVAAALSWNRLKDAPI
CCCCHHHHHHHHHHCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHH
RTAFERGLGPITLGILFHVGLTVLRTADHSVVAYLVSAVVCALMLFTRISPLYFMAVAGV
HHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGAIGVIPS
HHHHCCCCC
>Mature Secondary Structure
MVDPSSAWDTWLQVVWTFLRLSLFSLGGGNTLLAEYHHLSVERFGWITSSQFADIYALAE
CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
AAPGPSSMIVGLLGLGAGWDHGLGWGLLCGVSAEVAVLLPSTVVMVAAALSWNRLKDAPI
CCCCHHHHHHHHHHCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHH
RTAFERGLGPITLGILFHVGLTVLRTADHSVVAYLVSAVVCALMLFTRISPLYFMAVAGV
HHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGAIGVIPS
HHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA