| Definition | Synechococcus sp. RCC307, complete genome. |
|---|---|
| Accession | NC_009482 |
| Length | 2,224,914 |
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The map label for this gene is chrA
Identifier: 148241539
GI number: 148241539
Start: 414765
End: 415334
Strand: Direct
Name: chrA
Synonym: SynRCC307_0440
Alternate gene names: NA
Gene position: 414765-415334 (Clockwise)
Preceding gene: 148241538
Following gene: 148241541
Centisome position: 18.64
GC content: 63.51
Gene sequence:
>570_bases ATGGTTGATCCCAGCAGCGCTTGGGACACCTGGCTTCAGGTGGTGTGGACCTTCCTGCGCCTGTCGCTGTTTTCCCTCGG CGGCGGCAACACCTTGCTGGCGGAATACCACCACCTCTCGGTAGAGCGCTTTGGCTGGATCACCAGCTCCCAGTTCGCTG ACATCTATGCCCTCGCTGAAGCAGCGCCTGGGCCCAGCTCCATGATCGTGGGGCTCTTGGGGCTGGGGGCTGGCTGGGAC CACGGCCTGGGGTGGGGCCTGTTGTGTGGGGTGAGCGCTGAGGTGGCGGTGTTGCTGCCCTCCACCGTGGTGATGGTGGC GGCGGCCTTGAGCTGGAACCGGCTCAAAGATGCACCGATTCGCACCGCCTTTGAACGGGGCTTGGGGCCAATCACATTGG GAATCCTGTTCCATGTGGGCCTCACCGTGCTGCGCACGGCGGACCACAGCGTGGTGGCTTATTTGGTTTCGGCTGTGGTC TGCGCCTTGATGTTGTTCACGCGCATCTCACCGCTGTATTTCATGGCGGTTGCCGGGGTGCTGGGCGCCATTGGCGTCAT CCCCAGCTGA
Upstream 100 bases:
>100_bases ACCTTTGTGGTGCTGGAGTTCAAGGGGATTGGCCTGATCCCGGTGGTGCTGGTGTTGGGGCCGATTGCCATGGCCCTCTA CTGGCCGCGGCAGCAGCGCC
Downstream 100 bases:
>100_bases TCGGCACCCCTAATTGGGCGGCACTGATTGCAATCTCATCGCCCTCGAGCCGCGCTTGCTCGGTGACTCCTTCCGGCGGC GGTTCTTCCGGGCCGCGCGC
Product: chromate transporter
Products: NA
Alternate protein names: ChrA Half Sized-Like Protein; Chromate Efflux Pump; Chromate Transporter Family; Chromate Transporter ChrA; Subunit Of Chromate Transporter
Number of amino acids: Translated: 189; Mature: 189
Protein sequence:
>189_residues MVDPSSAWDTWLQVVWTFLRLSLFSLGGGNTLLAEYHHLSVERFGWITSSQFADIYALAEAAPGPSSMIVGLLGLGAGWD HGLGWGLLCGVSAEVAVLLPSTVVMVAAALSWNRLKDAPIRTAFERGLGPITLGILFHVGLTVLRTADHSVVAYLVSAVV CALMLFTRISPLYFMAVAGVLGAIGVIPS
Sequences:
>Translated_189_residues MVDPSSAWDTWLQVVWTFLRLSLFSLGGGNTLLAEYHHLSVERFGWITSSQFADIYALAEAAPGPSSMIVGLLGLGAGWD HGLGWGLLCGVSAEVAVLLPSTVVMVAAALSWNRLKDAPIRTAFERGLGPITLGILFHVGLTVLRTADHSVVAYLVSAVV CALMLFTRISPLYFMAVAGVLGAIGVIPS >Mature_189_residues MVDPSSAWDTWLQVVWTFLRLSLFSLGGGNTLLAEYHHLSVERFGWITSSQFADIYALAEAAPGPSSMIVGLLGLGAGWD HGLGWGLLCGVSAEVAVLLPSTVVMVAAALSWNRLKDAPIRTAFERGLGPITLGILFHVGLTVLRTADHSVVAYLVSAVV CALMLFTRISPLYFMAVAGVLGAIGVIPS
Specific function: Unknown
COG id: COG2059
COG function: function code P; Chromate transport protein ChrA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20010; Mature: 20010
Theoretical pI: Translated: 6.34; Mature: 6.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVDPSSAWDTWLQVVWTFLRLSLFSLGGGNTLLAEYHHLSVERFGWITSSQFADIYALAE CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH AAPGPSSMIVGLLGLGAGWDHGLGWGLLCGVSAEVAVLLPSTVVMVAAALSWNRLKDAPI CCCCHHHHHHHHHHCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHH RTAFERGLGPITLGILFHVGLTVLRTADHSVVAYLVSAVVCALMLFTRISPLYFMAVAGV HHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGAIGVIPS HHHHCCCCC >Mature Secondary Structure MVDPSSAWDTWLQVVWTFLRLSLFSLGGGNTLLAEYHHLSVERFGWITSSQFADIYALAE CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH AAPGPSSMIVGLLGLGAGWDHGLGWGLLCGVSAEVAVLLPSTVVMVAAALSWNRLKDAPI CCCCHHHHHHHHHHCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHH RTAFERGLGPITLGILFHVGLTVLRTADHSVVAYLVSAVVCALMLFTRISPLYFMAVAGV HHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGAIGVIPS HHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA