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The map label for this gene is ybgC [C]

Identifier: 148241521

GI number: 148241521

Start: 402368

End: 402811

Strand: Direct

Name: ybgC [C]

Synonym: SynRCC307_0422

Alternate gene names: 148241521

Gene position: 402368-402811 (Clockwise)

Preceding gene: 148241519

Following gene: 148241522

Centisome position: 18.08

GC content: 65.99

Gene sequence:

>444_bases
ATGGCTGGGGATGTAACGCGCTTGCCGTGGGTCTGTCGCAAACAGGTGCTGCCGCAAGACGCCGACCATGCCGGGGTGCT
TTGGCATGGGTCCTATGTGGCCTGGCTTGAGGAGGCGAGGGTTCTGGCCTTGGCCGAGGCCGGTTTGGCCTATGCCGAGC
TTTCGGCCCAGGGGTTGGAATTGATGGTGGTCGATTTGCAGATCCGCTATCTGCAGGCGTTGGCCCATGGAGAAGCGGTG
GAGTTGCACAGCTGGTTGCAGCCCCACAGCGGTGTGCGCCTGCCGTTGCTGACGCGCTTCATCCAGGGCGATGGGGCTGT
GGCTGCTGAGGCGATCGTCACCTTGGCGCTGGTGGATCGCCGGCGCGGACGGCTGCAACGCCAGCGCCCGCCAGAGCTGG
AGGCGGCGTTGAAGCAGTTGGCGGCGGGCCCTGTGGCAGGCTGA

Upstream 100 bases:

>100_bases
ACATGCCCCTTGCCAGAGTCGGCGATCAACAGGTTGCGGAACATCAGTGTCTGGAGCTCGTAGCGGCAGCCTATGGCGAG
CAATTGAGCTGGGCTAGGGA

Downstream 100 bases:

>100_bases
TAATACAAATGAACTAATAGCTAGGTGATTGTTGGGCGCAGGAGTTGGTGGTGGACCTGGCTTCAGGTCCCTGGTGTTGG
GATCAGCCGGATCAAGCAGC

Product: thioesterase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 147; Mature: 146

Protein sequence:

>147_residues
MAGDVTRLPWVCRKQVLPQDADHAGVLWHGSYVAWLEEARVLALAEAGLAYAELSAQGLELMVVDLQIRYLQALAHGEAV
ELHSWLQPHSGVRLPLLTRFIQGDGAVAAEAIVTLALVDRRRGRLQRQRPPELEAALKQLAAGPVAG

Sequences:

>Translated_147_residues
MAGDVTRLPWVCRKQVLPQDADHAGVLWHGSYVAWLEEARVLALAEAGLAYAELSAQGLELMVVDLQIRYLQALAHGEAV
ELHSWLQPHSGVRLPLLTRFIQGDGAVAAEAIVTLALVDRRRGRLQRQRPPELEAALKQLAAGPVAG
>Mature_146_residues
AGDVTRLPWVCRKQVLPQDADHAGVLWHGSYVAWLEEARVLALAEAGLAYAELSAQGLELMVVDLQIRYLQALAHGEAVE
LHSWLQPHSGVRLPLLTRFIQGDGAVAAEAIVTLALVDRRRGRLQRQRPPELEAALKQLAAGPVAG

Specific function: Unknown

COG id: COG0824

COG function: function code R; Predicted thioesterase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 4-hydroxybenzoyl-CoA thioesterase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006684
- InterPro:   IPR008272
- InterPro:   IPR006683 [H]

Pfam domain/function: PF03061 4HBT [H]

EC number: NA

Molecular weight: Translated: 16010; Mature: 15879

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGDVTRLPWVCRKQVLPQDADHAGVLWHGSYVAWLEEARVLALAEAGLAYAELSAQGLE
CCCCCCCCCHHHHHHCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHCHHHHHHCCCCCE
LMVVDLQIRYLQALAHGEAVELHSWLQPHSGVRLPLLTRFIQGDGAVAAEAIVTLALVDR
EEEEHHHHHHHHHHHCCCHHHHHHHCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHH
RRGRLQRQRPPELEAALKQLAAGPVAG
HHHHHCCCCCCCHHHHHHHHHCCCCCC
>Mature Secondary Structure 
AGDVTRLPWVCRKQVLPQDADHAGVLWHGSYVAWLEEARVLALAEAGLAYAELSAQGLE
CCCCCCCCHHHHHHCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHCHHHHHHCCCCCE
LMVVDLQIRYLQALAHGEAVELHSWLQPHSGVRLPLLTRFIQGDGAVAAEAIVTLALVDR
EEEEHHHHHHHHHHHCCCHHHHHHHCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHH
RRGRLQRQRPPELEAALKQLAAGPVAG
HHHHHCCCCCCCHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]