| Definition | Synechococcus sp. RCC307, complete genome. |
|---|---|
| Accession | NC_009482 |
| Length | 2,224,914 |
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The map label for this gene is 148241499
Identifier: 148241499
GI number: 148241499
Start: 381839
End: 382120
Strand: Direct
Name: 148241499
Synonym: SynRCC307_0400
Alternate gene names: NA
Gene position: 381839-382120 (Clockwise)
Preceding gene: 148241498
Following gene: 148241502
Centisome position: 17.16
GC content: 58.16
Gene sequence:
>282_bases ATGCCATTGCCCCATCCAACTGGGTATCGCCCGCGGCAGCAGAGCCGGGTTGATCGCCGTCGGATCGTGCTTGCTGGGAT GTTGTTCGGTTTCTTTGCTGTGCTGCTGATGGTGTTGGGCCATCGAGCGGCTAGAGCGCCGGGCTCAAGCCTCAAGACGA TGTCTCTTGATCACGTGCTGGTGGTGATGTTTGGTGTGGGGTTTTGTGGCAGTTGGGGTGAAACGATGCGTCAGCTTTCT CTGGTTGCTCGCAGCCGGCAGACGCGGAATTCATTGGAGTGA
Upstream 100 bases:
>100_bases GCCTGTTTGTGGTCCCAGCGTTTTACGTGCTGATGAAAAAGCTGGAGGCCAACTGGTTCCCGGCCAGTCATGAGCAGCAG GACCCACTCCCGCAACCCTG
Downstream 100 bases:
>100_bases GGTTGGCAGCAGCGTGCCGCAGCGGTCGCAAAATTCGGCACCGTGTCGGTGGCCTCGGTAGCCGCAGTGGCTGCATTGGC GTTGGTCGTTTTGTCCCTGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 93; Mature: 92
Protein sequence:
>93_residues MPLPHPTGYRPRQQSRVDRRRIVLAGMLFGFFAVLLMVLGHRAARAPGSSLKTMSLDHVLVVMFGVGFCGSWGETMRQLS LVARSRQTRNSLE
Sequences:
>Translated_93_residues MPLPHPTGYRPRQQSRVDRRRIVLAGMLFGFFAVLLMVLGHRAARAPGSSLKTMSLDHVLVVMFGVGFCGSWGETMRQLS LVARSRQTRNSLE >Mature_92_residues PLPHPTGYRPRQQSRVDRRRIVLAGMLFGFFAVLLMVLGHRAARAPGSSLKTMSLDHVLVVMFGVGFCGSWGETMRQLSL VARSRQTRNSLE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10413; Mature: 10281
Theoretical pI: Translated: 12.36; Mature: 12.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 6.5 %Met (Translated Protein) 7.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 5.4 %Met (Mature Protein) 6.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLPHPTGYRPRQQSRVDRRRIVLAGMLFGFFAVLLMVLGHRAARAPGSSLKTMSLDHVL CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCHHHHHHHH VVMFGVGFCGSWGETMRQLSLVARSRQTRNSLE HHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure PLPHPTGYRPRQQSRVDRRRIVLAGMLFGFFAVLLMVLGHRAARAPGSSLKTMSLDHVL CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCHHHHHHHH VVMFGVGFCGSWGETMRQLSLVARSRQTRNSLE HHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA