| Definition | Synechococcus sp. RCC307, complete genome. |
|---|---|
| Accession | NC_009482 |
| Length | 2,224,914 |
Click here to switch to the map view.
The map label for this gene is 148241463
Identifier: 148241463
GI number: 148241463
Start: 353974
End: 354906
Strand: Direct
Name: 148241463
Synonym: SynRCC307_0364
Alternate gene names: NA
Gene position: 353974-354906 (Clockwise)
Preceding gene: 148241460
Following gene: 148241470
Centisome position: 15.91
GC content: 52.95
Gene sequence:
>933_bases ATGAGTTTGCTTCAACGCGCCAGACATCAATTACAGCTTGCTTGCCAGGTGTGGAATCGCCATGGCTGTGTTGATCTGAG TGCAGCTTTTGCGTTCCATAGTCTCCAATCTTTTTTCCCTTTTTTGTTGGTGTGCCTGGGTGTTGGGGCACGTTTATTCG GGCAAGTTGATGGTGCGAGTGATCAATTACTGGCCGTAGCCGCTGGTGTTTTACCGCCTGGTGGCTTGGAAGTGATGGAA GGAATCTTGCAGCGTTTGGTGAATCAGGGTCAGGTGGCTGAGCAGATTGGTGGTTTGGTCTTAATTTTTAGTGCCAGTAA CGCCACGTTGTCGTTGCAGCGTGGGGCCGATCGTCTTTGGTATGGATTGGCGTTGCCCAATGCTGGTGATCAAGCTTGGC ATTGGCATCTTCGCCGCTGGTTCTTTCAACGTCTCAAGGCCATTGGTGCTGCTTTGCTGTTGGCATTGGTGCTGTTAATT AACCAAATCACCACGCCATTTCGTCTGCTTTGGTCGTCGATGTGGTCGAGTTTGGGTTCATTATCTCCCTGGTTACCGCA GCCCTGGGAGGTGCCTGCCCGCACCTTGATTTCGGTGCTTGGTAGTTGGTTGGGTGTGGTGATTGCCACCGTGCTGTTGT TTTCTTATTTGCCCAGTCGCAGGCCCCGGCTGGGCTTGCTGTGGCAAGGTTCCTTGCTGGTGGCCACGGGTCTCACCTTA GTGAACCCACTACTGGGGAGGGCTTTGGTCTGGGCTGGCTCGCGCTTTTTGGCCTATGGCCTCGTTGGCGGAATTATTCT TCTCACGCTTTGGATTTGGTTATTGGGCCTGATTTTGTATTTCGGGATGGCTTGGACCGTTGCGTTGACGCAGCGTCGTC AGCCGCAGTTGTTGTTAGCCAACGATGCCCAATCAGCTGAGGCTGATCTCTAG
Upstream 100 bases:
>100_bases GGGGTGGCCCCCCGTGAAAATAGCTCAATGCCAGGTAAAAATTTCCTTTACTTCATCAAAGCCATCCCGTGACGGGGTGG CTTTTTTTGTGTCTATTCGC
Downstream 100 bases:
>100_bases CCCGCAGTATCTGCGTTGATATCCAGAACAACAACATCGACTGGGTCAACGCGTCCATGGTCATCGAGAAAGCGTTTGTA TTCCCGTGCCGTGTGCCGCA
Product: ribonuclease BN-like family protein
Products: NA
Alternate protein names: Ribonuclease BN-Like Family Protein; YihY Family Protein; Serum Resistance Locus BrkB-Like; Serum Resistance Locus BrkB
Number of amino acids: Translated: 310; Mature: 309
Protein sequence:
>310_residues MSLLQRARHQLQLACQVWNRHGCVDLSAAFAFHSLQSFFPFLLVCLGVGARLFGQVDGASDQLLAVAAGVLPPGGLEVME GILQRLVNQGQVAEQIGGLVLIFSASNATLSLQRGADRLWYGLALPNAGDQAWHWHLRRWFFQRLKAIGAALLLALVLLI NQITTPFRLLWSSMWSSLGSLSPWLPQPWEVPARTLISVLGSWLGVVIATVLLFSYLPSRRPRLGLLWQGSLLVATGLTL VNPLLGRALVWAGSRFLAYGLVGGIILLTLWIWLLGLILYFGMAWTVALTQRRQPQLLLANDAQSAEADL
Sequences:
>Translated_310_residues MSLLQRARHQLQLACQVWNRHGCVDLSAAFAFHSLQSFFPFLLVCLGVGARLFGQVDGASDQLLAVAAGVLPPGGLEVME GILQRLVNQGQVAEQIGGLVLIFSASNATLSLQRGADRLWYGLALPNAGDQAWHWHLRRWFFQRLKAIGAALLLALVLLI NQITTPFRLLWSSMWSSLGSLSPWLPQPWEVPARTLISVLGSWLGVVIATVLLFSYLPSRRPRLGLLWQGSLLVATGLTL VNPLLGRALVWAGSRFLAYGLVGGIILLTLWIWLLGLILYFGMAWTVALTQRRQPQLLLANDAQSAEADL >Mature_309_residues SLLQRARHQLQLACQVWNRHGCVDLSAAFAFHSLQSFFPFLLVCLGVGARLFGQVDGASDQLLAVAAGVLPPGGLEVMEG ILQRLVNQGQVAEQIGGLVLIFSASNATLSLQRGADRLWYGLALPNAGDQAWHWHLRRWFFQRLKAIGAALLLALVLLIN QITTPFRLLWSSMWSSLGSLSPWLPQPWEVPARTLISVLGSWLGVVIATVLLFSYLPSRRPRLGLLWQGSLLVATGLTLV NPLLGRALVWAGSRFLAYGLVGGIILLTLWIWLLGLILYFGMAWTVALTQRRQPQLLLANDAQSAEADL
Specific function: Unknown
COG id: COG1295
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34044; Mature: 33912
Theoretical pI: Translated: 10.73; Mature: 10.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLLQRARHQLQLACQVWNRHGCVDLSAAFAFHSLQSFFPFLLVCLGVGARLFGQVDGAS CHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC DQLLAVAAGVLPPGGLEVMEGILQRLVNQGQVAEQIGGLVLIFSASNATLSLQRGADRLW HHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHCCEEEEEECCCCEEEHHCCCCHHE YGLALPNAGDQAWHWHLRRWFFQRLKAIGAALLLALVLLINQITTPFRLLWSSMWSSLGS EEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCC LSPWLPQPWEVPARTLISVLGSWLGVVIATVLLFSYLPSRRPRLGLLWQGSLLVATGLTL CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHH VNPLLGRALVWAGSRFLAYGLVGGIILLTLWIWLLGLILYFGMAWTVALTQRRQPQLLLA HHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEE NDAQSAEADL CCCCCCCCCC >Mature Secondary Structure SLLQRARHQLQLACQVWNRHGCVDLSAAFAFHSLQSFFPFLLVCLGVGARLFGQVDGAS HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC DQLLAVAAGVLPPGGLEVMEGILQRLVNQGQVAEQIGGLVLIFSASNATLSLQRGADRLW HHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHCCEEEEEECCCCEEEHHCCCCHHE YGLALPNAGDQAWHWHLRRWFFQRLKAIGAALLLALVLLINQITTPFRLLWSSMWSSLGS EEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCC LSPWLPQPWEVPARTLISVLGSWLGVVIATVLLFSYLPSRRPRLGLLWQGSLLVATGLTL CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHH VNPLLGRALVWAGSRFLAYGLVGGIILLTLWIWLLGLILYFGMAWTVALTQRRQPQLLLA HHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEE NDAQSAEADL CCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA