| Definition | Synechococcus sp. RCC307, complete genome. |
|---|---|
| Accession | NC_009482 |
| Length | 2,224,914 |
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The map label for this gene is 148241420
Identifier: 148241420
GI number: 148241420
Start: 316595
End: 317458
Strand: Direct
Name: 148241420
Synonym: SynRCC307_0321
Alternate gene names: NA
Gene position: 316595-317458 (Clockwise)
Preceding gene: 148241416
Following gene: 148241423
Centisome position: 14.23
GC content: 59.61
Gene sequence:
>864_bases ATGACGGGCAACTTGCAGGCCATTGGTTTTTTGTTCACCTGGGTGCTGCTGTGGTGCCTCGGGGGCATTGGCATTGAGGC CTTGTTGTTGCAAGTCGGCTTGATCGCGCCTGGTGGCGGCAGCTGGGCTGGTGGTCTTGGTTTTCTGCTTTGGACGTTGC TGATCGGTTTTGCTGGCTGGGCCTTGTTCAACCGCATCACCGGTTTGACCCAGCCCGCCCCCACGCTTCAAGCCTCGCCA TGGCATGAGGTCCCAGCTCCGTTGCAGCCTGTTTTGGCTGGGCTGGCGCCATTGGCTAACCAGCAGCGCCGTTTGCTGTT GGTGCTCAGCCAGCTGGGTGACTTTGATTCGGTTGAGTACGCCCAGGCGGTGATGGCCTCATGGCCTCAGCTGCGGGAAG CCGGCGTGGATGTTCGCGCCATCGGTATTGGCGATGCGGGAAGCGTTGATCGTTTTTGCGATTACACAGGGTTCCCAAAG GAACGCTTGTCGGTCGATCCCGAGGCGAGGTTGCACCGTGATCTGGGGTTGTACGGCGGTGCGGAGGGATTTGGTGGGCC CTGGGGAAACTTGCTCGCCATGTGCGCAGGCATTGGCTCGCCGGGCACCTTGCGCGAGGTTTTGCGTGGTTATCACGGCG GCGGGCGTTATCTCCCGTTTTGGATCGCCAGTATCCGCTTGCGGAACATGGTCGAAGTGCTCAGCCATTGGGGCACCTAT GTACCGGATGAGCGTTGGATGACCCAACGAGGCGCCACCTTTTTGATCAGCAGTGATGGGTCGTTGCTTTACAGCTGGAA GGACCCAGGACTGCTTGGCTTCTCAGCTTCGATGGCCGAACCGCTGAAGTTTTTGGAGCTCTAG
Upstream 100 bases:
>100_bases CTGTCCAACTTCATTGGGGTGTGCATTCAATCCATGCAGTGTCGCGCCAAGCGGCAACCCTCTGGATTGCTTTGCAGAAT GGCGGCCGCAAAACAACGCC
Downstream 100 bases:
>100_bases AGGCTCATCACGGGGCGCCTGAGATGAAGGAGGGCGACCACAAGCCTGAGCGTTTGGTTCTTAATTCCCTTCGCAGAGCT TCAGCATGATTTGCTCGCTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 287; Mature: 286
Protein sequence:
>287_residues MTGNLQAIGFLFTWVLLWCLGGIGIEALLLQVGLIAPGGGSWAGGLGFLLWTLLIGFAGWALFNRITGLTQPAPTLQASP WHEVPAPLQPVLAGLAPLANQQRRLLLVLSQLGDFDSVEYAQAVMASWPQLREAGVDVRAIGIGDAGSVDRFCDYTGFPK ERLSVDPEARLHRDLGLYGGAEGFGGPWGNLLAMCAGIGSPGTLREVLRGYHGGGRYLPFWIASIRLRNMVEVLSHWGTY VPDERWMTQRGATFLISSDGSLLYSWKDPGLLGFSASMAEPLKFLEL
Sequences:
>Translated_287_residues MTGNLQAIGFLFTWVLLWCLGGIGIEALLLQVGLIAPGGGSWAGGLGFLLWTLLIGFAGWALFNRITGLTQPAPTLQASP WHEVPAPLQPVLAGLAPLANQQRRLLLVLSQLGDFDSVEYAQAVMASWPQLREAGVDVRAIGIGDAGSVDRFCDYTGFPK ERLSVDPEARLHRDLGLYGGAEGFGGPWGNLLAMCAGIGSPGTLREVLRGYHGGGRYLPFWIASIRLRNMVEVLSHWGTY VPDERWMTQRGATFLISSDGSLLYSWKDPGLLGFSASMAEPLKFLEL >Mature_286_residues TGNLQAIGFLFTWVLLWCLGGIGIEALLLQVGLIAPGGGSWAGGLGFLLWTLLIGFAGWALFNRITGLTQPAPTLQASPW HEVPAPLQPVLAGLAPLANQQRRLLLVLSQLGDFDSVEYAQAVMASWPQLREAGVDVRAIGIGDAGSVDRFCDYTGFPKE RLSVDPEARLHRDLGLYGGAEGFGGPWGNLLAMCAGIGSPGTLREVLRGYHGGGRYLPFWIASIRLRNMVEVLSHWGTYV PDERWMTQRGATFLISSDGSLLYSWKDPGLLGFSASMAEPLKFLEL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31026; Mature: 30895
Theoretical pI: Translated: 5.66; Mature: 5.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGNLQAIGFLFTWVLLWCLGGIGIEALLLQVGLIAPGGGSWAGGLGFLLWTLLIGFAGW CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHH ALFNRITGLTQPAPTLQASPWHEVPAPLQPVLAGLAPLANQQRRLLLVLSQLGDFDSVEY HHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH AQAVMASWPQLREAGVDVRAIGIGDAGSVDRFCDYTGFPKERLSVDPEARLHRDLGLYGG HHHHHHCCHHHHHCCCCEEEEECCCCCCHHHHHCCCCCCHHHCCCCHHHHHHHHHCCCCC AEGFGGPWGNLLAMCAGIGSPGTLREVLRGYHGGGRYLPFWIASIRLRNMVEVLSHWGTY CCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCC VPDERWMTQRGATFLISSDGSLLYSWKDPGLLGFSASMAEPLKFLEL CCCHHHHHHCCCEEEEECCCCEEEEECCCCCCCCCHHHHHHHHHHCC >Mature Secondary Structure TGNLQAIGFLFTWVLLWCLGGIGIEALLLQVGLIAPGGGSWAGGLGFLLWTLLIGFAGW CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHH ALFNRITGLTQPAPTLQASPWHEVPAPLQPVLAGLAPLANQQRRLLLVLSQLGDFDSVEY HHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH AQAVMASWPQLREAGVDVRAIGIGDAGSVDRFCDYTGFPKERLSVDPEARLHRDLGLYGG HHHHHHCCHHHHHCCCCEEEEECCCCCCHHHHHCCCCCCHHHCCCCHHHHHHHHHCCCCC AEGFGGPWGNLLAMCAGIGSPGTLREVLRGYHGGGRYLPFWIASIRLRNMVEVLSHWGTY CCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCC VPDERWMTQRGATFLISSDGSLLYSWKDPGLLGFSASMAEPLKFLEL CCCHHHHHHCCCEEEEECCCCEEEEECCCCCCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA