Definition Synechococcus sp. RCC307, complete genome.
Accession NC_009482
Length 2,224,914

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The map label for this gene is 148241406

Identifier: 148241406

GI number: 148241406

Start: 302693

End: 304072

Strand: Direct

Name: 148241406

Synonym: SynRCC307_0307

Alternate gene names: NA

Gene position: 302693-304072 (Clockwise)

Preceding gene: 148241405

Following gene: 148241407

Centisome position: 13.6

GC content: 62.75

Gene sequence:

>1380_bases
GTGTGGAACGAGCCCAGTGATGGGGTTCCTCTGCAGGCTGATCCCAGTGCCGCAGCGCCGCAGCCCGCCGTGGTGGCCAC
GGTGGAGCCGGGATCGATCGGCGAGGAGCTTGGCTTTCAACCTGGCGACCGTCTGGTGGCTGTCAATGGCATTCGCCCGC
GGGATCTGATTGATCTGCGCATGCTCTGCGGTGAGGAAGATCTCGCCTTGGAGGTGGAGGACCCCGATGGCACCAGTCAT
CACATTGAACTGGAAAAAGATGCTGATGACGGCTTGGGTTTGGGCTTTACCGAGGCCCTATTCGATGGCCTGAAGCAGTG
CAACAACCACTGCCCGTTCTGCTTTATCGATCAGCAGCCTCCAGGGCGGCGCTCAAGCCTGTATCTCAAAGACGACGACT
ACCGCCTCAGCTTTCTCTACGGCTCCTACCTCACCCTCACCAACCTGTTGCCAGCCGATTGGCAGCGGATCGAGCGCCAA
CGCCTCTCGCCGCTTTTTGTCTCGGTCCATGCCACCAATCCCGCCCTGCGCAGCCGATTGCTGGTCAACGAGCGGGCCGG
CCAGATCCTCGATCAAATCGCCTGGTTTCAAGCCAAGCGCCTGCAAATCCATGCCCAGGTGGTGGTGTGCCCAGGCCTGA
ACGATGGCGATGCCCTGGTGCAAACCCTGCAGGACCTGGCGCGTTTTGGTGGTGGCGATTGGCCAGCGGTGCTGTCGGTG
GCGGTGGTGCCGGTGGGGTTGACCCGTTTTCGCCCCGATGGGGATGGCCTGGTGCCGGTCACCCCGGCGATGGCTCAGCG
CACCATTGCAGTGGTGGAACCCCTGCAGCAGCAGTTCTCGCAGCGTTTCGGCAGCCGTTGGGCCTGGCTCTCCGATGAGT
GGTATTTGATGGCGGGGCTGCCGTTGCCGCAACGGGCCAGTTATGAGGATTTGCCCCAACAGGAGAACGGTGTTGGCAGC
ATTCGCGCCTTCCTGGAGCAGCTCGATGACGCCACGCAAGAGCTGCCGGCTGCTTTGCCCAAATCCCGCAGCTTGAGTTG
GGTGGTGGGGAGTTTGGTGGGGCCCAGCCTCAAGCCGGTGGTGGAGCGCTTGCATCAAGTGGAGGGGCTGGATCTCCGCC
TGCAGTCCCTCCCTAGTCCCTATTGGGGCTGTGAGCAGGTGGTCACGGGGTTGCTCACCGGGCAAGACCTGATTGATGGG
CTGCAAGGCAAGGACTTGGGCGATGCGGTGCTGCTGCCTGCGGTGCTGCTGCGCCAGGGCCAGCCTGTGTTTCTGGATGA
CTTGAGCTTGGAGGACGTGCAGCAGTGCCTTGGAGTTCCGCTGCAGGTGGTGGGGGGTGCGGCTGAAGTCGTGGCTGCCT
GCCTTCACGAAACCCCTTAG

Upstream 100 bases:

>100_bases
CAGCACCTGGCCCTTTGTGATCTATCGATTGGTATTTGGGGTGGTTTTGCTGGCTCTCGTGCTGGCAAACCCCACACTGG
GATAAGTCGCCTAAATCAGG

Downstream 100 bases:

>100_bases
CCCCATTAAATTCTTTCCAAAGGAATTCGAAAGGGCTTGTGAAAGGACGTCTGCGCAGCAGCTTGCTGGCCCTCGTCCTG
ATGGGCTCACCTCTTGCCGC

Product: Fe-S oxidoreductase

Products: NA

Alternate protein names: FeS-Containing Oxidoreductase; FeS-Containing Cyanobacterial-Specific Oxidoreductase; PDZ Domain Protein; FeS-Containing Organism-Specific Oxidoreductase; FeS-Containing-Specific Oxidoreductase; Response Regulator Receiver Protein; PDZ Domain-Containing Protein

Number of amino acids: Translated: 459; Mature: 459

Protein sequence:

>459_residues
MWNEPSDGVPLQADPSAAAPQPAVVATVEPGSIGEELGFQPGDRLVAVNGIRPRDLIDLRMLCGEEDLALEVEDPDGTSH
HIELEKDADDGLGLGFTEALFDGLKQCNNHCPFCFIDQQPPGRRSSLYLKDDDYRLSFLYGSYLTLTNLLPADWQRIERQ
RLSPLFVSVHATNPALRSRLLVNERAGQILDQIAWFQAKRLQIHAQVVVCPGLNDGDALVQTLQDLARFGGGDWPAVLSV
AVVPVGLTRFRPDGDGLVPVTPAMAQRTIAVVEPLQQQFSQRFGSRWAWLSDEWYLMAGLPLPQRASYEDLPQQENGVGS
IRAFLEQLDDATQELPAALPKSRSLSWVVGSLVGPSLKPVVERLHQVEGLDLRLQSLPSPYWGCEQVVTGLLTGQDLIDG
LQGKDLGDAVLLPAVLLRQGQPVFLDDLSLEDVQQCLGVPLQVVGGAAEVVAACLHETP

Sequences:

>Translated_459_residues
MWNEPSDGVPLQADPSAAAPQPAVVATVEPGSIGEELGFQPGDRLVAVNGIRPRDLIDLRMLCGEEDLALEVEDPDGTSH
HIELEKDADDGLGLGFTEALFDGLKQCNNHCPFCFIDQQPPGRRSSLYLKDDDYRLSFLYGSYLTLTNLLPADWQRIERQ
RLSPLFVSVHATNPALRSRLLVNERAGQILDQIAWFQAKRLQIHAQVVVCPGLNDGDALVQTLQDLARFGGGDWPAVLSV
AVVPVGLTRFRPDGDGLVPVTPAMAQRTIAVVEPLQQQFSQRFGSRWAWLSDEWYLMAGLPLPQRASYEDLPQQENGVGS
IRAFLEQLDDATQELPAALPKSRSLSWVVGSLVGPSLKPVVERLHQVEGLDLRLQSLPSPYWGCEQVVTGLLTGQDLIDG
LQGKDLGDAVLLPAVLLRQGQPVFLDDLSLEDVQQCLGVPLQVVGGAAEVVAACLHETP
>Mature_459_residues
MWNEPSDGVPLQADPSAAAPQPAVVATVEPGSIGEELGFQPGDRLVAVNGIRPRDLIDLRMLCGEEDLALEVEDPDGTSH
HIELEKDADDGLGLGFTEALFDGLKQCNNHCPFCFIDQQPPGRRSSLYLKDDDYRLSFLYGSYLTLTNLLPADWQRIERQ
RLSPLFVSVHATNPALRSRLLVNERAGQILDQIAWFQAKRLQIHAQVVVCPGLNDGDALVQTLQDLARFGGGDWPAVLSV
AVVPVGLTRFRPDGDGLVPVTPAMAQRTIAVVEPLQQQFSQRFGSRWAWLSDEWYLMAGLPLPQRASYEDLPQQENGVGS
IRAFLEQLDDATQELPAALPKSRSLSWVVGSLVGPSLKPVVERLHQVEGLDLRLQSLPSPYWGCEQVVTGLLTGQDLIDG
LQGKDLGDAVLLPAVLLRQGQPVFLDDLSLEDVQQCLGVPLQVVGGAAEVVAACLHETP

Specific function: Unknown

COG id: COG1625

COG function: function code C; Fe-S oxidoreductase, related to NifB/MoaA family

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 50068; Mature: 50068

Theoretical pI: Translated: 4.27; Mature: 4.27

Prosite motif: PS50106 PDZ

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWNEPSDGVPLQADPSAAAPQPAVVATVEPGSIGEELGFQPGDRLVAVNGIRPRDLIDLR
CCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHCCCCCCCEEEECCCCCHHHHHHH
MLCGEEDLALEVEDPDGTSHHIELEKDADDGLGLGFTEALFDGLKQCNNHCPFCFIDQQP
HHCCCCCCEEEEECCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCEEEECCCC
PGRRSSLYLKDDDYRLSFLYGSYLTLTNLLPADWQRIERQRLSPLFVSVHATNPALRSRL
CCCCCEEEEECCCEEEEEECCCHHHHHHCCHHHHHHHHHHCCCEEEEEEECCCHHHHHHH
LVNERAGQILDQIAWFQAKRLQIHAQVVVCPGLNDGDALVQTLQDLARFGGGDWPAVLSV
HHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCCCCHHHHHHHHHHHHHHCCCCHHHHHHH
AVVPVGLTRFRPDGDGLVPVTPAMAQRTIAVVEPLQQQFSQRFGSRWAWLSDEWYLMAGL
HHHHHHHHEECCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCEEEEECC
PLPQRASYEDLPQQENGVGSIRAFLEQLDDATQELPAALPKSRSLSWVVGSLVGPSLKPV
CCCCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHH
VERLHQVEGLDLRLQSLPSPYWGCEQVVTGLLTGQDLIDGLQGKDLGDAVLLPAVLLRQG
HHHHHHHCCCCEEHHHCCCCCCCHHHHHHHHHCCHHHHCCCCCCCCCHHHHHHHHHHHCC
QPVFLDDLSLEDVQQCLGVPLQVVGGAAEVVAACLHETP
CCEEEECCCHHHHHHHHCCCHHHHCCHHHHHHHHHHCCC
>Mature Secondary Structure
MWNEPSDGVPLQADPSAAAPQPAVVATVEPGSIGEELGFQPGDRLVAVNGIRPRDLIDLR
CCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHCCCCCCCEEEECCCCCHHHHHHH
MLCGEEDLALEVEDPDGTSHHIELEKDADDGLGLGFTEALFDGLKQCNNHCPFCFIDQQP
HHCCCCCCEEEEECCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCEEEECCCC
PGRRSSLYLKDDDYRLSFLYGSYLTLTNLLPADWQRIERQRLSPLFVSVHATNPALRSRL
CCCCCEEEEECCCEEEEEECCCHHHHHHCCHHHHHHHHHHCCCEEEEEEECCCHHHHHHH
LVNERAGQILDQIAWFQAKRLQIHAQVVVCPGLNDGDALVQTLQDLARFGGGDWPAVLSV
HHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCCCCHHHHHHHHHHHHHHCCCCHHHHHHH
AVVPVGLTRFRPDGDGLVPVTPAMAQRTIAVVEPLQQQFSQRFGSRWAWLSDEWYLMAGL
HHHHHHHHEECCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCEEEEECC
PLPQRASYEDLPQQENGVGSIRAFLEQLDDATQELPAALPKSRSLSWVVGSLVGPSLKPV
CCCCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHH
VERLHQVEGLDLRLQSLPSPYWGCEQVVTGLLTGQDLIDGLQGKDLGDAVLLPAVLLRQG
HHHHHHHCCCCEEHHHCCCCCCCHHHHHHHHHCCHHHHCCCCCCCCCHHHHHHHHHHHCC
QPVFLDDLSLEDVQQCLGVPLQVVGGAAEVVAACLHETP
CCEEEECCCHHHHHHHHCCCHHHHCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA