| Definition | Synechococcus sp. RCC307, complete genome. |
|---|---|
| Accession | NC_009482 |
| Length | 2,224,914 |
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The map label for this gene is 148241395
Identifier: 148241395
GI number: 148241395
Start: 292336
End: 292722
Strand: Direct
Name: 148241395
Synonym: SynRCC307_0296
Alternate gene names: NA
Gene position: 292336-292722 (Clockwise)
Preceding gene: 148241394
Following gene: 148241397
Centisome position: 13.14
GC content: 64.08
Gene sequence:
>387_bases ATGGCACCGCTCTCGCCCCAGCAGCGCCGCGAGCTGGATGATGCCCACTCCAACCGCACGATCGAGCTCGATCCCAGTGG CTATTTTCTGATCCGCGTGGATGCTGCTGCTGGCGAGCTGGTGGTCCAGCACTTCGGCAATGCCATCAATGACCAGGGGC TTGCCACCGATCCAGACACTGGTGAGGTGCTCAGTTGCCGCGGTGGCGGCCCACGTGCAGCGTCAGCGGAATACCGCGGC CGCAGCGCCAAAGAGCTGGGCATGGCGCTGACCGAAAGCGCCGAGCCTTTGCCGCTCAGTCGATTGGATCACGCCTTGTA CCTGGGCCGTGAGCTGCAAAAAGCGGAGCTCTGCCTCGAGCAGGGCCTCGACTACGTGCAGGACTGA
Upstream 100 bases:
>100_bases GAGGAGGTGGAGGCGATTAACGCAGAGTTGCCGTTTAGCGGCCGCCAGATCCCGCTGGCCCCAGAGCAGGGCAAAATCGA AGGCTGAGCCACCACCTGTC
Downstream 100 bases:
>100_bases CTCAGGCGGGCTGCAGTTCGCGCTTGGCCGGCAACTCAGCAAGTTGCTCTTGGATTTCCTGGGTCACCACACCGCGGTAC TCCTGGAAGTGCTCGTTGTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 128; Mature: 127
Protein sequence:
>128_residues MAPLSPQQRRELDDAHSNRTIELDPSGYFLIRVDAAAGELVVQHFGNAINDQGLATDPDTGEVLSCRGGGPRAASAEYRG RSAKELGMALTESAEPLPLSRLDHALYLGRELQKAELCLEQGLDYVQD
Sequences:
>Translated_128_residues MAPLSPQQRRELDDAHSNRTIELDPSGYFLIRVDAAAGELVVQHFGNAINDQGLATDPDTGEVLSCRGGGPRAASAEYRG RSAKELGMALTESAEPLPLSRLDHALYLGRELQKAELCLEQGLDYVQD >Mature_127_residues APLSPQQRRELDDAHSNRTIELDPSGYFLIRVDAAAGELVVQHFGNAINDQGLATDPDTGEVLSCRGGGPRAASAEYRGR SAKELGMALTESAEPLPLSRLDHALYLGRELQKAELCLEQGLDYVQD
Specific function: Unknown
COG id: COG0294
COG function: function code H; Dihydropteroate synthase and related enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ycf91 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017260 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13878; Mature: 13746
Theoretical pI: Translated: 4.42; Mature: 4.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAPLSPQQRRELDDAHSNRTIELDPSGYFLIRVDAAAGELVVQHFGNAINDQGLATDPDT CCCCCHHHHHHHHHHCCCCEEEECCCCEEEEEEECCCHHHHHHHHCCCCCCCCCCCCCCC GEVLSCRGGGPRAASAEYRGRSAKELGMALTESAEPLPLSRLDHALYLGRELQKAELCLE CCEEEECCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH QGLDYVQD HCHHHHCC >Mature Secondary Structure APLSPQQRRELDDAHSNRTIELDPSGYFLIRVDAAAGELVVQHFGNAINDQGLATDPDT CCCCHHHHHHHHHHCCCCEEEECCCCEEEEEEECCCHHHHHHHHCCCCCCCCCCCCCCC GEVLSCRGGGPRAASAEYRGRSAKELGMALTESAEPLPLSRLDHALYLGRELQKAELCLE CCEEEECCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH QGLDYVQD HCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11759840 [H]