Definition Synechococcus sp. RCC307, complete genome.
Accession NC_009482
Length 2,224,914

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The map label for this gene is 148241394

Identifier: 148241394

GI number: 148241394

Start: 291030

End: 292322

Strand: Direct

Name: 148241394

Synonym: SynRCC307_0295

Alternate gene names: NA

Gene position: 291030-292322 (Clockwise)

Preceding gene: 148241392

Following gene: 148241395

Centisome position: 13.08

GC content: 62.03

Gene sequence:

>1293_bases
GTGACCTCAGCCTGCAGCACTCCCCAGCCGTGCGATGGCCTGATTAGGTTTTGCAGCAACTCCAGCCCCACTGTGAGCGA
GTCCGATCACTCCGCTGAGGCCTTGGAGGCGCGCTGGCATCAGCAGCTCGCCGAGATTCCTGAGCAGGCTTGGGATGCTC
TGGTGGCCTCCGCTGGACTGCCGTTCTACCGCTGGGCTTGGCTGGAAGCCTTGGAGCGCTCCGGAAGCATTGTTCCCTCC
CAGGGCTGGCAGGCTTGCCACCTCAGCCTGTGGCGCGAGCAACAGCTGATCGCCGTGGCGCCGCTCTACGTCAAAGGCCA
TAGCTACGGCGAGTTCGTCTTTGATCAATCCTTCGCTCAACTCGCTGGACAGTTGGGCCTGCGCTACTACCCCAAGCTGC
TGGGCATGAGCCCATTGAGCCCAATCTTGGGCTATCGCTTCTTCATTGCCAGCAACGAAGAGGAGGGCGCTTGCACCGCG
TTGATGCTGCGCTTGATCGATCGCTTTTGCGAGCGCAACCAACTGCTGAGTTGCAACTTCCTCTATGTCGATCCGGCTTG
GCGGCCCCACGCCGAAGCCGCTGGCTGCTCCGCCTGGCTCAATCAGCAGAGCCTGTGGAGCAATCCCGGTTACGGCAGCT
TTGAGGACTACCTCGCCAGCTTTAACGCCAACCAACGCCGCAATATCCGCCGCGAACGCAAGGCCGTGCAGCAAGCGGGC
CTGCAGGTGAGCGCCATTGCCGCGGAAGCGATCACGCCGGAGCTGCTGGAGCGCATGCATGGCTTTTATGAAGACCATTG
CCGCCGCTGGGGCATGTGGGGCAGTAAGTACCTCACCGAAGAGTTCTTCTCACTGGCGCAGCAGTTGCGTCAGCACCTGG
TGCTGTTCAGTGCCCATCGCCACGGGGAGGATCCCCATCAGCCCATCGCCATGAGCCTCTGCGTGCGGGAGGGCGATCAC
CTCTGGGGCCGGTATTGGGGTTCAACGGTGGAGATCGACAATCTCCACTTTGAGGTCTGCTATTACGCGCCGATTGAATG
GGCCATCGCTCAGGGCATTCGCCATTACGACCCAGGTGCCGGCGGTAGCCACAAGCGCCGCCGCGGTTTTGTGGCCCGAC
CGCATGCCAGCTTGCACCGCTGGTATGAGCCCCAGTTCGCCGGCTTGATCAAGCGTTGGTTGCCATTGGCCAATGCCCAG
CAGCTGGAGGAGGTGGAGGCGATTAACGCAGAGTTGCCGTTTAGCGGCCGCCAGATCCCGCTGGCCCCAGAGCAGGGCAA
AATCGAAGGCTGA

Upstream 100 bases:

>100_bases
GCAGCTCCAGCTGCGGCCGCAGCACCATCAACAGGTCTTCGGTCGGCGTGCTGGTTTGAGCCAGGATCAGTAAGGGCAGC
AGCATCGAGCCGTTGCGGGT

Downstream 100 bases:

>100_bases
GCCACCACCTGTCATGGCACCGCTCTCGCCCCAGCAGCGCCGCGAGCTGGATGATGCCCACTCCAACCGCACGATCGAGC
TCGATCCCAGTGGCTATTTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 430; Mature: 429

Protein sequence:

>430_residues
MTSACSTPQPCDGLIRFCSNSSPTVSESDHSAEALEARWHQQLAEIPEQAWDALVASAGLPFYRWAWLEALERSGSIVPS
QGWQACHLSLWREQQLIAVAPLYVKGHSYGEFVFDQSFAQLAGQLGLRYYPKLLGMSPLSPILGYRFFIASNEEEGACTA
LMLRLIDRFCERNQLLSCNFLYVDPAWRPHAEAAGCSAWLNQQSLWSNPGYGSFEDYLASFNANQRRNIRRERKAVQQAG
LQVSAIAAEAITPELLERMHGFYEDHCRRWGMWGSKYLTEEFFSLAQQLRQHLVLFSAHRHGEDPHQPIAMSLCVREGDH
LWGRYWGSTVEIDNLHFEVCYYAPIEWAIAQGIRHYDPGAGGSHKRRRGFVARPHASLHRWYEPQFAGLIKRWLPLANAQ
QLEEVEAINAELPFSGRQIPLAPEQGKIEG

Sequences:

>Translated_430_residues
MTSACSTPQPCDGLIRFCSNSSPTVSESDHSAEALEARWHQQLAEIPEQAWDALVASAGLPFYRWAWLEALERSGSIVPS
QGWQACHLSLWREQQLIAVAPLYVKGHSYGEFVFDQSFAQLAGQLGLRYYPKLLGMSPLSPILGYRFFIASNEEEGACTA
LMLRLIDRFCERNQLLSCNFLYVDPAWRPHAEAAGCSAWLNQQSLWSNPGYGSFEDYLASFNANQRRNIRRERKAVQQAG
LQVSAIAAEAITPELLERMHGFYEDHCRRWGMWGSKYLTEEFFSLAQQLRQHLVLFSAHRHGEDPHQPIAMSLCVREGDH
LWGRYWGSTVEIDNLHFEVCYYAPIEWAIAQGIRHYDPGAGGSHKRRRGFVARPHASLHRWYEPQFAGLIKRWLPLANAQ
QLEEVEAINAELPFSGRQIPLAPEQGKIEG
>Mature_429_residues
TSACSTPQPCDGLIRFCSNSSPTVSESDHSAEALEARWHQQLAEIPEQAWDALVASAGLPFYRWAWLEALERSGSIVPSQ
GWQACHLSLWREQQLIAVAPLYVKGHSYGEFVFDQSFAQLAGQLGLRYYPKLLGMSPLSPILGYRFFIASNEEEGACTAL
MLRLIDRFCERNQLLSCNFLYVDPAWRPHAEAAGCSAWLNQQSLWSNPGYGSFEDYLASFNANQRRNIRRERKAVQQAGL
QVSAIAAEAITPELLERMHGFYEDHCRRWGMWGSKYLTEEFFSLAQQLRQHLVLFSAHRHGEDPHQPIAMSLCVREGDHL
WGRYWGSTVEIDNLHFEVCYYAPIEWAIAQGIRHYDPGAGGSHKRRRGFVARPHASLHRWYEPQFAGLIKRWLPLANAQQ
LEEVEAINAELPFSGRQIPLAPEQGKIEG

Specific function: Unknown

COG id: COG3146

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48876; Mature: 48744

Theoretical pI: Translated: 6.55; Mature: 6.55

Prosite motif: PS00615 C_TYPE_LECTIN_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSACSTPQPCDGLIRFCSNSSPTVSESDHSAEALEARWHQQLAEIPEQAWDALVASAGL
CCCCCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PFYRWAWLEALERSGSIVPSQGWQACHLSLWREQQLIAVAPLYVKGHSYGEFVFDQSFAQ
CHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCEEEEECEEEECCCCCHHHHHHHHHH
LAGQLGLRYYPKLLGMSPLSPILGYRFFIASNEEEGACTALMLRLIDRFCERNQLLSCNF
HHHHHCHHHHHHHHCCCCCHHHHCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCEEEEEE
LYVDPAWRPHAEAAGCSAWLNQQSLWSNPGYGSFEDYLASFNANQRRNIRRERKAVQQAG
EEECCCCCCCCCHHHHHHHHCHHHHCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHC
LQVSAIAAEAITPELLERMHGFYEDHCRRWGMWGSKYLTEEFFSLAQQLRQHLVLFSAHR
CEEEEHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
HGEDPHQPIAMSLCVREGDHLWGRYWGSTVEIDNLHFEVCYYAPIEWAIAQGIRHYDPGA
CCCCCCCHHHHHHHHHCCCHHHHHHCCCEEEECCEEEEEEEECCHHHHHHHCHHHCCCCC
GGSHKRRRGFVARPHASLHRWYEPQFAGLIKRWLPLANAQQLEEVEAINAELPFSGRQIP
CCCCHHHCCCCCCCCHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCC
LAPEQGKIEG
CCCCCCCCCC
>Mature Secondary Structure 
TSACSTPQPCDGLIRFCSNSSPTVSESDHSAEALEARWHQQLAEIPEQAWDALVASAGL
CCCCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PFYRWAWLEALERSGSIVPSQGWQACHLSLWREQQLIAVAPLYVKGHSYGEFVFDQSFAQ
CHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCEEEEECEEEECCCCCHHHHHHHHHH
LAGQLGLRYYPKLLGMSPLSPILGYRFFIASNEEEGACTALMLRLIDRFCERNQLLSCNF
HHHHHCHHHHHHHHCCCCCHHHHCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCEEEEEE
LYVDPAWRPHAEAAGCSAWLNQQSLWSNPGYGSFEDYLASFNANQRRNIRRERKAVQQAG
EEECCCCCCCCCHHHHHHHHCHHHHCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHC
LQVSAIAAEAITPELLERMHGFYEDHCRRWGMWGSKYLTEEFFSLAQQLRQHLVLFSAHR
CEEEEHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
HGEDPHQPIAMSLCVREGDHLWGRYWGSTVEIDNLHFEVCYYAPIEWAIAQGIRHYDPGA
CCCCCCCHHHHHHHHHCCCHHHHHHCCCEEEECCEEEEEEEECCHHHHHHHCHHHCCCCC
GGSHKRRRGFVARPHASLHRWYEPQFAGLIKRWLPLANAQQLEEVEAINAELPFSGRQIP
CCCCHHHCCCCCCCCHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCC
LAPEQGKIEG
CCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA