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The map label for this gene is ribD [C]

Identifier: 148241392

GI number: 148241392

Start: 290038

End: 290688

Strand: Direct

Name: ribD [C]

Synonym: SynRCC307_0293

Alternate gene names: 148241392

Gene position: 290038-290688 (Clockwise)

Preceding gene: 148241391

Following gene: 148241394

Centisome position: 13.04

GC content: 66.67

Gene sequence:

>651_bases
GTGACGCTTCGCCTGGTTCTGGCGGTCAGCCTCGATGGCCGGCTGGCACCCCCTGCAGGCGGAGCTGCCCAATTGGGTGG
CGCCGGTGATCGCTGCGTGCTTGAGGAGGCCCTGGCTTGGGCTGATGTTGCTGTGGTGGGTGCCGGCACCGTGCGGGCCC
ACGGCTGCAGCTGTTTGATTCATCGGCCTGAGTTGCAGCAGCAGCGCCAATCCCGCGGACAGTCGCTGCAACCGCCTTTG
CTGATTGCCAGCCGCCAGGCCACTCCAGTGGGTTTTGATCCCGCTTGGCGCCTTTGGGGCCAGCCCTTGCAGCTCTGGTG
GCTGAGCTCAGCGCCGCTGTTGGCGGCGCCGCCTGCTGGGTTTGCGCGCCAGCTGGCTTTGGAGAGTTGGCAGGGCTTGC
TGGCCCAACTCAACGCCGAGGGGCATCAACGCGTGCTGCTGTTGGGTGGGGCCCAGCTGGCTGGGGCCTTGCTTCAAGAG
GATCTGGTCGATGAGCTGCAGCTCACCATCTGCCCGCTGGTGCTGGGCGGTGAACACAGCTGGCTGCCGCCTTCCGCACA
GCCCCAGGCTGATCGCTGGTTGCTGCAGGAGCAGCGCTCCTTAGGCGATGGGGAGGTGCTGCTGCGCTATCAGCGCAAGG
GGAACTCCTGA

Upstream 100 bases:

>100_bases
TCAAGGCGCCGATCGCTGATCTCGGTGCCTCACTGCACAAGATTCGTCTGCAGGAGAGCCCCAACAACGCCGCTGAGATC
TACGCCGAACCCGCCCAGGT

Downstream 100 bases:

>100_bases
TCCCACACCGGCTTGGCGCTTTGCATCAGCCGTTCGATGCAGGCCGAAGCCACACCCAAGCTGGCGGGCCCCAGGCTGCC
TTCAAGAGCTTCACGGGCCA

Product: pyrimidine reductase, riboflavin biosynthesis

Products: 5-amino-6-(5-phosphoribosylamino)uracil; NADPH; H+

Alternate protein names: Pyrimidine Reductase Riboflavin Biosynthesis; Pyrimidine Reductase

Number of amino acids: Translated: 216; Mature: 215

Protein sequence:

>216_residues
MTLRLVLAVSLDGRLAPPAGGAAQLGGAGDRCVLEEALAWADVAVVGAGTVRAHGCSCLIHRPELQQQRQSRGQSLQPPL
LIASRQATPVGFDPAWRLWGQPLQLWWLSSAPLLAAPPAGFARQLALESWQGLLAQLNAEGHQRVLLLGGAQLAGALLQE
DLVDELQLTICPLVLGGEHSWLPPSAQPQADRWLLQEQRSLGDGEVLLRYQRKGNS

Sequences:

>Translated_216_residues
MTLRLVLAVSLDGRLAPPAGGAAQLGGAGDRCVLEEALAWADVAVVGAGTVRAHGCSCLIHRPELQQQRQSRGQSLQPPL
LIASRQATPVGFDPAWRLWGQPLQLWWLSSAPLLAAPPAGFARQLALESWQGLLAQLNAEGHQRVLLLGGAQLAGALLQE
DLVDELQLTICPLVLGGEHSWLPPSAQPQADRWLLQEQRSLGDGEVLLRYQRKGNS
>Mature_215_residues
TLRLVLAVSLDGRLAPPAGGAAQLGGAGDRCVLEEALAWADVAVVGAGTVRAHGCSCLIHRPELQQQRQSRGQSLQPPLL
IASRQATPVGFDPAWRLWGQPLQLWWLSSAPLLAAPPAGFARQLALESWQGLLAQLNAEGHQRVLLLGGAQLAGALLQED
LVDELQLTICPLVLGGEHSWLPPSAQPQADRWLLQEQRSLGDGEVLLRYQRKGNS

Specific function: Converts 2,5-Diamino-6-(Ribosylamino)-4(3h)-Pyrimidinone 5'-Phosphate Into 5-Amino-6-(Ribosylamino)-2,4(1h,3h)- Pyrimidinedione 5'-Phosphate. [C]

COG id: COG1985

COG function: function code H; Pyrimidine reductase, riboflavin biosynthesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 1.1.1.193

Molecular weight: Translated: 23165; Mature: 23034

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLRLVLAVSLDGRLAPPAGGAAQLGGAGDRCVLEEALAWADVAVVGAGTVRAHGCSCLI
CEEEEEEEEECCCEECCCCCCCCCCCCCCCHHHHHHHHHHHHEEEEECCEEEECCEEEEE
HRPELQQQRQSRGQSLQPPLLIASRQATPVGFDPAWRLWGQPLQLWWLSSAPLLAAPPAG
ECHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCHHHHHCCCCEEEEEECCCCEEECCCCH
FARQLALESWQGLLAQLNAEGHQRVLLLGGAQLAGALLQEDLVDELQLTICPLVLGGEHS
HHHHHHHHHHHHHHHHHCCCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHEEEEECCCCC
WLPPSAQPQADRWLLQEQRSLGDGEVLLRYQRKGNS
CCCCCCCCCHHHHHHHHHHCCCCCCEEEEEECCCCC
>Mature Secondary Structure 
TLRLVLAVSLDGRLAPPAGGAAQLGGAGDRCVLEEALAWADVAVVGAGTVRAHGCSCLI
EEEEEEEEECCCEECCCCCCCCCCCCCCCHHHHHHHHHHHHEEEEECCEEEECCEEEEE
HRPELQQQRQSRGQSLQPPLLIASRQATPVGFDPAWRLWGQPLQLWWLSSAPLLAAPPAG
ECHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCHHHHHCCCCEEEEEECCCCEEECCCCH
FARQLALESWQGLLAQLNAEGHQRVLLLGGAQLAGALLQEDLVDELQLTICPLVLGGEHS
HHHHHHHHHHHHHHHHHCCCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHEEEEECCCCC
WLPPSAQPQADRWLLQEQRSLGDGEVLLRYQRKGNS
CCCCCCCCCHHHHHHHHHHCCCCCCEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: 5-amino-6-(5-phosphoribitylamino)uracil; NADP+

Specific reaction: 5-amino-6-(5-phosphoribitylamino)uracil + NADP+ = 5-amino-6-(5-phosphoribosylamino)uracil + NADPH + H+

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA