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The map label for this gene is yfcH [C]

Identifier: 148241369

GI number: 148241369

Start: 272972

End: 273886

Strand: Direct

Name: yfcH [C]

Synonym: SynRCC307_0270

Alternate gene names: 148241369

Gene position: 272972-273886 (Clockwise)

Preceding gene: 148241367

Following gene: 148241374

Centisome position: 12.27

GC content: 63.83

Gene sequence:

>915_bases
ATGCGTCTGCTGCTACTGGGTTGCACGGGATTGGTGGGCCGTGAGCTGGTGCCGCAGCTGCTCGCTGCAGGGCACACGCT
CACCGTTGTTAGCCGCCAGCAGCGCCAACTAGCCGGCGTTACCTGCCTGCAAGCGGATCCATCGCGCTCTGAAAGTTGGG
CTGCCGGTTCAGCTCTGCAGCAAGCCCTTGCGCAAGCCGAAGGCGTGGTGAATCTGGCCGGGGAGCCCATTGCCGAGAAG
CGCTGGACCACTGCCCATCTTGAGGTTCTCCGTCGCAGCCGCATCGACACCACACGCCATTTGGTGGCAGCGATCAATGC
CAGCCCAACGCCCCCTCAGGTGCTGTTGAGCGCCTCGGCTGTGGGCTTCTACGGCACCAGCGAAACCGCCAGCTTTAACG
AAGACAGCCCCGCCGGCACCGATGTGCTCGGCAAGCTCTGCTCCCAGTGGGAAGCCGCTGCCGAAGAGGTCAACCCCGGC
ACGCGGCTGGTGATCACCCGCATCGGCATTGTGCTGGCGGCTGATGGCGGAGCACTCGGCAAGATGCTGCCGATCTTCCG
CGCCGGCTTTGGCGGTCCGATTGGCTCAGGCCAGCAGTGGATGAGCTGGATTGCCCGCGCCGATCTTTGCGGTTTGATCG
CTGCGGCGTTGACCGACGCCTCGTTGCAGGGTACTTACAACGCCACGGCCCCCAATCCGGTGTCGATGCGCGAGTTTTGC
TCGGAGCTTGGTCGCGCCTTGCGTCGCCCCAGCCTGCTCCCAGTGCCAGGCGCTGTGTTGAAGCTTCTGCTTGGTGATGG
CGCCGAAGTGGTGCTCCAAGGTCAGCAGGTGTTGCCGCAGAAGCTGCAGGCTCAGCAGTTTGCTTTTCAGGCGCCACAGC
TGGATCAGGCCTTTGAGCTCAGCCTGAAGTCTTAG

Upstream 100 bases:

>100_bases
GCTTCCTTTTTTCAGGGCATCAGCCATGGCCCAACTCCACAGTGGCTGCAGGCTAAAGCCCCAACAGGGCTAGGGTCCCC
AGCGCTATGGCTGTTGATTG

Downstream 100 bases:

>100_bases
TCCGGCGCTGCCACCAGCCCAGCACCCCGCTGATCACAGCGGCGGCCATCAAGAGTCCAATCGCTGGGGTGAACAGCGGC
TCCCAGAGCTGCTGGAACAC

Product: nucleoside-diphosphate sugar epimerase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 304; Mature: 304

Protein sequence:

>304_residues
MRLLLLGCTGLVGRELVPQLLAAGHTLTVVSRQQRQLAGVTCLQADPSRSESWAAGSALQQALAQAEGVVNLAGEPIAEK
RWTTAHLEVLRRSRIDTTRHLVAAINASPTPPQVLLSASAVGFYGTSETASFNEDSPAGTDVLGKLCSQWEAAAEEVNPG
TRLVITRIGIVLAADGGALGKMLPIFRAGFGGPIGSGQQWMSWIARADLCGLIAAALTDASLQGTYNATAPNPVSMREFC
SELGRALRRPSLLPVPGAVLKLLLGDGAEVVLQGQQVLPQKLQAQQFAFQAPQLDQAFELSLKS

Sequences:

>Translated_304_residues
MRLLLLGCTGLVGRELVPQLLAAGHTLTVVSRQQRQLAGVTCLQADPSRSESWAAGSALQQALAQAEGVVNLAGEPIAEK
RWTTAHLEVLRRSRIDTTRHLVAAINASPTPPQVLLSASAVGFYGTSETASFNEDSPAGTDVLGKLCSQWEAAAEEVNPG
TRLVITRIGIVLAADGGALGKMLPIFRAGFGGPIGSGQQWMSWIARADLCGLIAAALTDASLQGTYNATAPNPVSMREFC
SELGRALRRPSLLPVPGAVLKLLLGDGAEVVLQGQQVLPQKLQAQQFAFQAPQLDQAFELSLKS
>Mature_304_residues
MRLLLLGCTGLVGRELVPQLLAAGHTLTVVSRQQRQLAGVTCLQADPSRSESWAAGSALQQALAQAEGVVNLAGEPIAEK
RWTTAHLEVLRRSRIDTTRHLVAAINASPTPPQVLLSASAVGFYGTSETASFNEDSPAGTDVLGKLCSQWEAAAEEVNPG
TRLVITRIGIVLAADGGALGKMLPIFRAGFGGPIGSGQQWMSWIARADLCGLIAAALTDASLQGTYNATAPNPVSMREFC
SELGRALRRPSLLPVPGAVLKLLLGDGAEVVLQGQQVLPQKLQAQQFAFQAPQLDQAFELSLKS

Specific function: Unknown

COG id: COG1090

COG function: function code R; Predicted nucleoside-diphosphate sugar epimerase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sugar epimerase family. SDR39U1 subfamily [H]

Homologues:

Organism=Homo sapiens, GI116812630, Length=303, Percent_Identity=37.953795379538, Blast_Score=185, Evalue=4e-47,
Organism=Escherichia coli, GI1788642, Length=299, Percent_Identity=43.8127090301003, Blast_Score=238, Evalue=4e-64,
Organism=Drosophila melanogaster, GI28573846, Length=310, Percent_Identity=32.5806451612903, Blast_Score=135, Evalue=3e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013549
- InterPro:   IPR001509
- InterPro:   IPR016040
- InterPro:   IPR010099 [H]

Pfam domain/function: PF08338 DUF1731; PF01370 Epimerase [H]

EC number: NA

Molecular weight: Translated: 32007; Mature: 32007

Theoretical pI: Translated: 7.35; Mature: 7.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLLLLGCTGLVGRELVPQLLAAGHTLTVVSRQQRQLAGVTCLQADPSRSESWAAGSALQ
CEEEEEECCCHHHHHHHHHHHHCCCEEEEHHHHHHHHHCEEEECCCCCCCCCHHHHHHHH
QALAQAEGVVNLAGEPIAEKRWTTAHLEVLRRSRIDTTRHLVAAINASPTPPQVLLSASA
HHHHHHCCCEECCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHH
VGFYGTSETASFNEDSPAGTDVLGKLCSQWEAAAEEVNPGTRLVITRIGIVLAADGGALG
HEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECEEEEECCCHHH
KMLPIFRAGFGGPIGSGQQWMSWIARADLCGLIAAALTDASLQGTYNATAPNPVSMREFC
HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHH
SELGRALRRPSLLPVPGAVLKLLLGDGAEVVLQGQQVLPQKLQAQQFAFQAPQLDQAFEL
HHHHHHHCCCCCCCCCHHHHHHHHCCCHHEEECCHHHHHHHHHHHHHHHCCCCCCHHHHC
SLKS
CCCC
>Mature Secondary Structure
MRLLLLGCTGLVGRELVPQLLAAGHTLTVVSRQQRQLAGVTCLQADPSRSESWAAGSALQ
CEEEEEECCCHHHHHHHHHHHHCCCEEEEHHHHHHHHHCEEEECCCCCCCCCHHHHHHHH
QALAQAEGVVNLAGEPIAEKRWTTAHLEVLRRSRIDTTRHLVAAINASPTPPQVLLSASA
HHHHHHCCCEECCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHH
VGFYGTSETASFNEDSPAGTDVLGKLCSQWEAAAEEVNPGTRLVITRIGIVLAADGGALG
HEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECEEEEECCCHHH
KMLPIFRAGFGGPIGSGQQWMSWIARADLCGLIAAALTDASLQGTYNATAPNPVSMREFC
HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHH
SELGRALRRPSLLPVPGAVLKLLLGDGAEVVLQGQQVLPQKLQAQQFAFQAPQLDQAFEL
HHHHHHHCCCCCCCCCHHHHHHHHCCCHHEEECCHHHHHHHHHHHHHHHCCCCCCHHHHC
SLKS
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]