Definition Synechococcus sp. RCC307, complete genome.
Accession NC_009482
Length 2,224,914

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The map label for this gene is 148241360

Identifier: 148241360

GI number: 148241360

Start: 259710

End: 260660

Strand: Direct

Name: 148241360

Synonym: SynRCC307_0261

Alternate gene names: NA

Gene position: 259710-260660 (Clockwise)

Preceding gene: 148241358

Following gene: 148241363

Centisome position: 11.67

GC content: 63.83

Gene sequence:

>951_bases
GTGCCGGTCAACTTAAGGCTGTTGGCGCCCCAATCTCGCCGCTTGATGCTGCATGTGGGAACGGTCAAGACCGGCTCCAC
ATCCCTGCAGGCCTACTTCGCTGAGCATCAGCAGGCCCTAGCTGAAGCCGGCTGGTGTTATCTGCCTGCTATTGGCCGGC
CCGATCGCCGCGATCTGGCGGCGGCCTGCATTGCCATCGATGATCAACGCGATGAACTGCTGCGGGCGCTTCGTTTGGTG
GCGCCCCAGCAGCGTTTGGCATTTCGCCAGCAGGTGAAGGCCGAGCTTGAGGAGCAACTCAAGGCCGTGCCAGATGAGCT
GGGCGTGATCCTCAGCTCCGAGCACTTCCATCTCAGCCTGCAGCGCCCAGAAGAAATCGAAACCTTGAAGCAGCTCCTAT
TGGAGCTGGGGTTGGAGGTTCAGCAGGTGGTGATTTATCTGCGCGAACCGTTGGCGCTGATCGAATCGCTCTTCTCAACG
ATGGTGCGCTCAGGCGATCAGCGGCCCCTGCCGGCGGATCCAGCTGATCCCTTCGTGGCCTTGATCTGTGACCACAGGGC
CAGCCTGCAGCGCTGGCGAGCTGTCTTTGGTGAGGCGGTGGTGCAGCCCCGCGCCTTTCCGCCCCGAGCAGGCGGCAGCT
TGAGCGCTGATTTTTTGCAGTTGCTCGGCAATGCTCCTGTAGCGGGCTGGCCGCCTGAGCCTCAGCGCCAGCGCAATCGC
GGCCTCAACCCCAGCGCTTTAAACCTGCTGGCTTGGCTGAATCGCCACTGCACCTGGCTCACCCCACAAGCGCGCTTCCG
CTGGCAGCGCGGCCTGCGCCGCTTGCTCGATGGGGCCCTAAGCCGTTGGGCGAGTGGGTCCTACCGGATGCCGGGGCCGC
AGCGCAGCCGCTACGGCCAGCTTTACAGCGATGGCTATGCCGCCTGGCTCAGACGCGAGCTGCCTCAGTAG

Upstream 100 bases:

>100_bases
GCACCCCCAACACCGGAGCGTGCAGATTCACCAGCCGCAGGGCGGCGCCGATCAGCAGCAGGGGCCAGACCGATCGGGTG
CTGATTAGTCTCGGCCGCAT

Downstream 100 bases:

>100_bases
GGCACGTTCCAAACAAAGCGCGAGGAGGCGGCGTACTTCCAGATGAAGTCCACCAAGATGCCGCTGGCCACAGCGATCAT
CGCGATTGGCCCCCCTTGCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 316; Mature: 315

Protein sequence:

>316_residues
MPVNLRLLAPQSRRLMLHVGTVKTGSTSLQAYFAEHQQALAEAGWCYLPAIGRPDRRDLAAACIAIDDQRDELLRALRLV
APQQRLAFRQQVKAELEEQLKAVPDELGVILSSEHFHLSLQRPEEIETLKQLLLELGLEVQQVVIYLREPLALIESLFST
MVRSGDQRPLPADPADPFVALICDHRASLQRWRAVFGEAVVQPRAFPPRAGGSLSADFLQLLGNAPVAGWPPEPQRQRNR
GLNPSALNLLAWLNRHCTWLTPQARFRWQRGLRRLLDGALSRWASGSYRMPGPQRSRYGQLYSDGYAAWLRRELPQ

Sequences:

>Translated_316_residues
MPVNLRLLAPQSRRLMLHVGTVKTGSTSLQAYFAEHQQALAEAGWCYLPAIGRPDRRDLAAACIAIDDQRDELLRALRLV
APQQRLAFRQQVKAELEEQLKAVPDELGVILSSEHFHLSLQRPEEIETLKQLLLELGLEVQQVVIYLREPLALIESLFST
MVRSGDQRPLPADPADPFVALICDHRASLQRWRAVFGEAVVQPRAFPPRAGGSLSADFLQLLGNAPVAGWPPEPQRQRNR
GLNPSALNLLAWLNRHCTWLTPQARFRWQRGLRRLLDGALSRWASGSYRMPGPQRSRYGQLYSDGYAAWLRRELPQ
>Mature_315_residues
PVNLRLLAPQSRRLMLHVGTVKTGSTSLQAYFAEHQQALAEAGWCYLPAIGRPDRRDLAAACIAIDDQRDELLRALRLVA
PQQRLAFRQQVKAELEEQLKAVPDELGVILSSEHFHLSLQRPEEIETLKQLLLELGLEVQQVVIYLREPLALIESLFSTM
VRSGDQRPLPADPADPFVALICDHRASLQRWRAVFGEAVVQPRAFPPRAGGSLSADFLQLLGNAPVAGWPPEPQRQRNRG
LNPSALNLLAWLNRHCTWLTPQARFRWQRGLRRLLDGALSRWASGSYRMPGPQRSRYGQLYSDGYAAWLRRELPQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35750; Mature: 35618

Theoretical pI: Translated: 9.89; Mature: 9.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPVNLRLLAPQSRRLMLHVGTVKTGSTSLQAYFAEHQQALAEAGWCYLPAIGRPDRRDLA
CCCEEEEECCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEECCCCCCCHHHHH
AACIAIDDQRDELLRALRLVAPQQRLAFRQQVKAELEEQLKAVPDELGVILSSEHFHLSL
HHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCHHHHCEEECCCCEEEEC
QRPEEIETLKQLLLELGLEVQQVVIYLREPLALIESLFSTMVRSGDQRPLPADPADPFVA
CCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHH
LICDHRASLQRWRAVFGEAVVQPRAFPPRAGGSLSADFLQLLGNAPVAGWPPEPQRQRNR
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHC
GLNPSALNLLAWLNRHCTWLTPQARFRWQRGLRRLLDGALSRWASGSYRMPGPQRSRYGQ
CCCHHHHHHHHHHHCCCEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCH
LYSDGYAAWLRRELPQ
HHHHHHHHHHHHHCCC
>Mature Secondary Structure 
PVNLRLLAPQSRRLMLHVGTVKTGSTSLQAYFAEHQQALAEAGWCYLPAIGRPDRRDLA
CCEEEEECCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEECCCCCCCHHHHH
AACIAIDDQRDELLRALRLVAPQQRLAFRQQVKAELEEQLKAVPDELGVILSSEHFHLSL
HHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCHHHHCEEECCCCEEEEC
QRPEEIETLKQLLLELGLEVQQVVIYLREPLALIESLFSTMVRSGDQRPLPADPADPFVA
CCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHH
LICDHRASLQRWRAVFGEAVVQPRAFPPRAGGSLSADFLQLLGNAPVAGWPPEPQRQRNR
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHC
GLNPSALNLLAWLNRHCTWLTPQARFRWQRGLRRLLDGALSRWASGSYRMPGPQRSRYGQ
CCCHHHHHHHHHHHCCCEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCH
LYSDGYAAWLRRELPQ
HHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA