Definition Synechococcus sp. RCC307, complete genome.
Accession NC_009482
Length 2,224,914

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The map label for this gene is 148241301

Identifier: 148241301

GI number: 148241301

Start: 204836

End: 205603

Strand: Direct

Name: 148241301

Synonym: SynRCC307_0202

Alternate gene names: NA

Gene position: 204836-205603 (Clockwise)

Preceding gene: 148241300

Following gene: 148241302

Centisome position: 9.21

GC content: 37.63

Gene sequence:

>768_bases
ATGACAGCTACCCTTTTTCTTTGTTGTCCATCTTTGAGCTTCTCAGGGAGCACAGCTCGTACAGCTAATTCATTTAACCG
TCTAAAAAACCTTCTTAGTGTGTTTGATATTTCAGTCAAAACACTCTTTCTTTCTTCTGATCAGAATGATCTTGCTTCTG
CTGAGGCGCACTCATACTTCGACTATATATTTTTTTCTCCATGTGAAGGAGTTTATGCAGCTTTCAATGCAGCCATCAAA
AAATCCCTCAGTCTTTCTGCTGATTGGATATGGCTTTTGGGAGAAGGAGATACAATTTTATGTGAACGTCTAGACTTGTC
TATTTTGTCCCAAAATCTTTCCTTGGGATCGCATATATTGATGATGAACATGTTCGTGGGTGATAGAAAACTAAGGTGCA
AACTAAAAGAAGCTTTCCCATCTCCGTTGTTTAGTCTTGATACAATGAGATTTAACCATCCTGCATCTATTATTTCTGCA
AATGCTTATTCTATCAATGGCTTGTACTCACTTGATTATAAGGTTGTCTCTGACTATTATTGGTTGCACAAGGCTTGTGC
TGCCAATCTATCGATTACCCATTTGCCTTTTGTATCCGTCTACCATGAATTAGGTGGCATTTCTACCTCCTCAGGTAAAT
CGCGTTTTTTCGAGCATTATCAATGTTTGCTTGCTTTAAACAGAGTATATGGTTTTTCCTTTTCTGTTTTCTTTGCGCTC
ATTTTTCGTTTAACAAGGTGTCTTGTTTCTAGTTTTTTCGCTAAATGA

Upstream 100 bases:

>100_bases
AGGCTATTTCTAAGCTTTGGCTTAATCGTATTTCGGAAACTGAATCACTCTCGATATATAATAGCTGCCATAAGTTGATG
AACTTTTTTGGCTATAGTCG

Downstream 100 bases:

>100_bases
CTAAATATTCATTTGTTATCCTGACATGTTCTTCCCCATGGCATGGGCGAGGTGGCGCCTCACGTGTCATATCTTCTTAT
ATAGATTTTTATACTCGAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 255; Mature: 254

Protein sequence:

>255_residues
MTATLFLCCPSLSFSGSTARTANSFNRLKNLLSVFDISVKTLFLSSDQNDLASAEAHSYFDYIFFSPCEGVYAAFNAAIK
KSLSLSADWIWLLGEGDTILCERLDLSILSQNLSLGSHILMMNMFVGDRKLRCKLKEAFPSPLFSLDTMRFNHPASIISA
NAYSINGLYSLDYKVVSDYYWLHKACAANLSITHLPFVSVYHELGGISTSSGKSRFFEHYQCLLALNRVYGFSFSVFFAL
IFRLTRCLVSSFFAK

Sequences:

>Translated_255_residues
MTATLFLCCPSLSFSGSTARTANSFNRLKNLLSVFDISVKTLFLSSDQNDLASAEAHSYFDYIFFSPCEGVYAAFNAAIK
KSLSLSADWIWLLGEGDTILCERLDLSILSQNLSLGSHILMMNMFVGDRKLRCKLKEAFPSPLFSLDTMRFNHPASIISA
NAYSINGLYSLDYKVVSDYYWLHKACAANLSITHLPFVSVYHELGGISTSSGKSRFFEHYQCLLALNRVYGFSFSVFFAL
IFRLTRCLVSSFFAK
>Mature_254_residues
TATLFLCCPSLSFSGSTARTANSFNRLKNLLSVFDISVKTLFLSSDQNDLASAEAHSYFDYIFFSPCEGVYAAFNAAIKK
SLSLSADWIWLLGEGDTILCERLDLSILSQNLSLGSHILMMNMFVGDRKLRCKLKEAFPSPLFSLDTMRFNHPASIISAN
AYSINGLYSLDYKVVSDYYWLHKACAANLSITHLPFVSVYHELGGISTSSGKSRFFEHYQCLLALNRVYGFSFSVFFALI
FRLTRCLVSSFFAK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28577; Mature: 28446

Theoretical pI: Translated: 8.20; Mature: 8.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTATLFLCCPSLSFSGSTARTANSFNRLKNLLSVFDISVKTLFLSSDQNDLASAEAHSYF
CCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCHHHHHHHHHHH
DYIFFSPCEGVYAAFNAAIKKSLSLSADWIWLLGEGDTILCERLDLSILSQNLSLGSHIL
HEEEECCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCEEEEHHHHHHHHHHCCCCCHHHH
MMNMFVGDRKLRCKLKEAFPSPLFSLDTMRFNHPASIISANAYSINGLYSLDYKVVSDYY
HHHHHHCCHHHEEEHHHHCCCCCHHHCCEECCCCHHHEECCCEEECCEEEECHHHHHHHH
WLHKACAANLSITHLPFVSVYHELGGISTSSGKSRFFEHYQCLLALNRVYGFSFSVFFAL
HHHHHHHCCCEEEHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHH
IFRLTRCLVSSFFAK
HHHHHHHHHHHHHCC
>Mature Secondary Structure 
TATLFLCCPSLSFSGSTARTANSFNRLKNLLSVFDISVKTLFLSSDQNDLASAEAHSYF
CEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCHHHHHHHHHHH
DYIFFSPCEGVYAAFNAAIKKSLSLSADWIWLLGEGDTILCERLDLSILSQNLSLGSHIL
HEEEECCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCEEEEHHHHHHHHHHCCCCCHHHH
MMNMFVGDRKLRCKLKEAFPSPLFSLDTMRFNHPASIISANAYSINGLYSLDYKVVSDYY
HHHHHHCCHHHEEEHHHHCCCCCHHHCCEECCCCHHHEECCCEEECCEEEECHHHHHHHH
WLHKACAANLSITHLPFVSVYHELGGISTSSGKSRFFEHYQCLLALNRVYGFSFSVFFAL
HHHHHHHCCCEEEHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHH
IFRLTRCLVSSFFAK
HHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA