| Definition | Synechococcus sp. RCC307, complete genome. |
|---|---|
| Accession | NC_009482 |
| Length | 2,224,914 |
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The map label for this gene is 148241237
Identifier: 148241237
GI number: 148241237
Start: 132974
End: 133291
Strand: Direct
Name: 148241237
Synonym: SynRCC307_0138
Alternate gene names: NA
Gene position: 132974-133291 (Clockwise)
Preceding gene: 148241235
Following gene: 148241238
Centisome position: 5.98
GC content: 59.43
Gene sequence:
>318_bases ATGACCCAGCTCCACGATCTGCGCCTGCGTCTTTTGGTGCAGCAGGAGAGCGAGAGAATCGCTAGCACTCAGCCTTCCGA GCTTGATTTGTCTGTCGTTCAGGCCCGCAGCCTCTGCTGGTTAGCACTTCTAGCTGAAGCCCACGAGGACCAAGCCAGCG ACGCTGAGCGCCGCGGCGATACCGAACAAGCCATGGGTTGGTTCGCTGATGCGATGCGCCTGCGTGACGCAATCCAGGTG GTGACCACCATTGAAATTCCCCTGCCTGCGACCATTGATGAGGCGGAAGAGGACGACGACCAATCCATGGCTGCCTGA
Upstream 100 bases:
>100_bases AGTCCCGCCAGCCCCGTGACAAGGTGCTGCCACCTCCACAGGTGGTGCCCTGTTGAAACCTTGCCCCTGTCGCTAGCGTT CAAGCGTCTGACAGGGAGTC
Downstream 100 bases:
>100_bases TGTCATGATGGAATTTGGTCCTGAGGGAGCACTCTTTGCCCGAAGAGCCCTGCCAATGCCCTGATTGCCGGCGCTTCTAC CGCGAGCACGACCGGTTAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 105; Mature: 104
Protein sequence:
>105_residues MTQLHDLRLRLLVQQESERIASTQPSELDLSVVQARSLCWLALLAEAHEDQASDAERRGDTEQAMGWFADAMRLRDAIQV VTTIEIPLPATIDEAEEDDDQSMAA
Sequences:
>Translated_105_residues MTQLHDLRLRLLVQQESERIASTQPSELDLSVVQARSLCWLALLAEAHEDQASDAERRGDTEQAMGWFADAMRLRDAIQV VTTIEIPLPATIDEAEEDDDQSMAA >Mature_104_residues TQLHDLRLRLLVQQESERIASTQPSELDLSVVQARSLCWLALLAEAHEDQASDAERRGDTEQAMGWFADAMRLRDAIQVV TTIEIPLPATIDEAEEDDDQSMAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11749; Mature: 11618
Theoretical pI: Translated: 3.94; Mature: 3.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQLHDLRLRLLVQQESERIASTQPSELDLSVVQARSLCWLALLAEAHEDQASDAERRGD CCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCC TEQAMGWFADAMRLRDAIQVVTTIEIPLPATIDEAEEDDDQSMAA HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TQLHDLRLRLLVQQESERIASTQPSELDLSVVQARSLCWLALLAEAHEDQASDAERRGD CCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCC TEQAMGWFADAMRLRDAIQVVTTIEIPLPATIDEAEEDDDQSMAA HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA