| Definition | Synechococcus sp. RCC307, complete genome. |
|---|---|
| Accession | NC_009482 |
| Length | 2,224,914 |
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The map label for this gene is csck [H]
Identifier: 148241203
GI number: 148241203
Start: 102086
End: 103057
Strand: Direct
Name: csck [H]
Synonym: SynRCC307_0104
Alternate gene names: 148241203
Gene position: 102086-103057 (Clockwise)
Preceding gene: 148241202
Following gene: 148241205
Centisome position: 4.59
GC content: 64.2
Gene sequence:
>972_bases ATGGCCCAGGTGTTCTGCCTCGGTGAGGCCTTGATCGATCGTCTGCTCCCCTGGGGCGATGATCTAGGCCGAGATTGTTT GGGTGGTGCGCCCGCCAATGGGGCCTGCGCTTTGGCTCGGTTGGGAACTGCCGCAGGCTTTGTTGGACGCCTGGGGCGTG ATCCCATCGGTGCAGCCTTTGCAGAACTCTTTGAGCAGCGGGGCCTAGATACCAGCGGTCTGCAGTGGGATGAGCAGCGC CCGAGCCGGGTGGTGTTGGTCGAGCGTGATGCCAGCGGCGACCGTTGTTTTGGCGGCTTTGATGGCGATCTTGGGGCAGG CTTTGCCGATACGGCCTTGGCCGCCGATCAGCTGCCAGCTGGGTTGGGAATTGGTTGGCTTGCTTGCGGCACCATTCCTT TGGCCACTCCCACTTCAGCGTTGGCTCTGGAGCAGGCCATCAGCCGGCATCGCGCCGGCGGCGGGCGCTTGGTGCTCGAT GTGAATTGGCGGCCCACGTTCTGGGGGTTGGCTGCAAACGCTGAACCCACCGCTGAGATCCAGCAGCAGATGCAGCCGCT GTTGCGGCAAGCCGATTTGCTCAAGTTGGCTGCCGAGGAGGCCGAGGGCCTGTTTTCAAGCCGTGATCCCCAAGCGGTGG CCGCTGCTTTGCCCCAACGCCCTGCGGTGGTGGTGACCGATGGCGGCAAAGGGGTGAGCTGGTCGATGGGGGCAGCCTCT GGTGCTTTGCCCGCTTACCGGGTGCCCGTTGTCGACACCACGGGTGCCGGCGATGCGTTTTTGGCTGGCTTGCTGCACCG CTTGGTGAAAGAGCCGACTCTCTTGGCTGGTTCTGACCCCGATCGGGTTAGGCAGGCGTTGCAATTCGCCAGTGCTTGCG GCGCTTTGGTGTGTCAAGGCGCTGGCGCCATCGATCCTCAGCCCGCCGAGGCAGCGGCGTTGGCGTTTATTGAGCAGCAG CCGGCGGGCTGA
Upstream 100 bases:
>100_bases CTGGCTTGGCTGCCTTCCCGTTCCCAGCCGCCAATGCGCGGATCATTGCTGCCTTACTGCAGCGCTTTGGCCACTCTGAG GAGAGCAGCAAGGTGGCCTG
Downstream 100 bases:
>100_bases TCACCAGCTGGCGGCCGCCATCGCAATAGAGCAGTTGCAGCTGCCAAGCCTGGGAAGGCGTGAAGCTCAGCCGTTGCGGC CATTCCACCGCGAGCAACGC
Product: fructokinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 323; Mature: 322
Protein sequence:
>323_residues MAQVFCLGEALIDRLLPWGDDLGRDCLGGAPANGACALARLGTAAGFVGRLGRDPIGAAFAELFEQRGLDTSGLQWDEQR PSRVVLVERDASGDRCFGGFDGDLGAGFADTALAADQLPAGLGIGWLACGTIPLATPTSALALEQAISRHRAGGGRLVLD VNWRPTFWGLAANAEPTAEIQQQMQPLLRQADLLKLAAEEAEGLFSSRDPQAVAAALPQRPAVVVTDGGKGVSWSMGAAS GALPAYRVPVVDTTGAGDAFLAGLLHRLVKEPTLLAGSDPDRVRQALQFASACGALVCQGAGAIDPQPAEAAALAFIEQQ PAG
Sequences:
>Translated_323_residues MAQVFCLGEALIDRLLPWGDDLGRDCLGGAPANGACALARLGTAAGFVGRLGRDPIGAAFAELFEQRGLDTSGLQWDEQR PSRVVLVERDASGDRCFGGFDGDLGAGFADTALAADQLPAGLGIGWLACGTIPLATPTSALALEQAISRHRAGGGRLVLD VNWRPTFWGLAANAEPTAEIQQQMQPLLRQADLLKLAAEEAEGLFSSRDPQAVAAALPQRPAVVVTDGGKGVSWSMGAAS GALPAYRVPVVDTTGAGDAFLAGLLHRLVKEPTLLAGSDPDRVRQALQFASACGALVCQGAGAIDPQPAEAAALAFIEQQ PAG >Mature_322_residues AQVFCLGEALIDRLLPWGDDLGRDCLGGAPANGACALARLGTAAGFVGRLGRDPIGAAFAELFEQRGLDTSGLQWDEQRP SRVVLVERDASGDRCFGGFDGDLGAGFADTALAADQLPAGLGIGWLACGTIPLATPTSALALEQAISRHRAGGGRLVLDV NWRPTFWGLAANAEPTAEIQQQMQPLLRQADLLKLAAEEAEGLFSSRDPQAVAAALPQRPAVVVTDGGKGVSWSMGAASG ALPAYRVPVVDTTGAGDAFLAGLLHRLVKEPTLLAGSDPDRVRQALQFASACGALVCQGAGAIDPQPAEAAALAFIEQQP AG
Specific function: Unknown
COG id: COG0524
COG function: function code G; Sugar kinases, ribokinase family
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the carbohydrate kinase pfkB family [H]
Homologues:
Organism=Escherichia coli, GI87082281, Length=320, Percent_Identity=28.125, Blast_Score=87, Evalue=2e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011611 - InterPro: IPR002173 - InterPro: IPR002139 [H]
Pfam domain/function: PF00294 PfkB [H]
EC number: =2.7.1.4 [H]
Molecular weight: Translated: 33227; Mature: 33096
Theoretical pI: Translated: 4.40; Mature: 4.40
Prosite motif: PS00583 PFKB_KINASES_1 ; PS00584 PFKB_KINASES_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQVFCLGEALIDRLLPWGDDLGRDCLGGAPANGACALARLGTAAGFVGRLGRDPIGAAF CCEEEEHHHHHHHHHCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHH AELFEQRGLDTSGLQWDEQRPSRVVLVERDASGDRCFGGFDGDLGAGFADTALAADQLPA HHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCCCCEECCCCCCCCCCHHHHHHHHHHCCC GLGIGWLACGTIPLATPTSALALEQAISRHRAGGGRLVLDVNWRPTFWGLAANAEPTAEI CCCCHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCEEEEECCCCCHHHH QQQMQPLLRQADLLKLAAEEAEGLFSSRDPQAVAAALPQRPAVVVTDGGKGVSWSMGAAS HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCEEEEECCCCCCEEECCCCC GALPAYRVPVVDTTGAGDAFLAGLLHRLVKEPTLLAGSDPDRVRQALQFASACGALVCQG CCCCCEEECEEECCCCCHHHHHHHHHHHHCCCCEECCCCHHHHHHHHHHHHHHHHHHCCC AGAIDPQPAEAAALAFIEQQPAG CCCCCCCCHHHHHHHHHHCCCCC >Mature Secondary Structure AQVFCLGEALIDRLLPWGDDLGRDCLGGAPANGACALARLGTAAGFVGRLGRDPIGAAF CEEEEHHHHHHHHHCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHH AELFEQRGLDTSGLQWDEQRPSRVVLVERDASGDRCFGGFDGDLGAGFADTALAADQLPA HHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCCCCEECCCCCCCCCCHHHHHHHHHHCCC GLGIGWLACGTIPLATPTSALALEQAISRHRAGGGRLVLDVNWRPTFWGLAANAEPTAEI CCCCHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCEEEEECCCCCHHHH QQQMQPLLRQADLLKLAAEEAEGLFSSRDPQAVAAALPQRPAVVVTDGGKGVSWSMGAAS HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCEEEEECCCCCCEEECCCCC GALPAYRVPVVDTTGAGDAFLAGLLHRLVKEPTLLAGSDPDRVRQALQFASACGALVCQG CCCCCEEECEEECCCCCHHHHHHHHHHHHCCCCEECCCCHHHHHHHHHHHHHHHHHHCCC AGAIDPQPAEAAALAFIEQQPAG CCCCCCCCHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2174811 [H]