| Definition | Vibrio cholerae O395 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_009457 |
| Length | 3,024,069 |
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The map label for this gene is astA [H]
Identifier: 229259767
GI number: 229259767
Start: 2339243
End: 2340262
Strand: Reverse
Name: astA [H]
Synonym: VC0395_A2194
Alternate gene names: 229259767
Gene position: 2340262-2339243 (Counterclockwise)
Preceding gene: 147673566
Following gene: 147675138
Centisome position: 77.39
GC content: 48.73
Gene sequence:
>1020_bases ATGCTAGTTGTTCGTCCGATTAGCATGGCCGACTATGAGGCGCTACATACCTGCGCTGTCGAGTCCGGCCATGGCTTCAC ATCATTACCAGTAGATCAAGAGCTACTGACTAATCGTATTACCCACTCAGAATACAGCTTCAGCAAACCGAACGTCACAA TGCCTGGTGATGAAGGCTATTTGATGGTGGGTGTGGATACTGAAACTGGGCAAGTGGCCGGAACCACGGGCATTGAAGCC TCGATTGGCTGGGATGTGCCGTTTTATTCTTATCACATCAGCACCATAGTTCACTCTTCGCCTAAATTGGGCGTCAATAA TGTAGTGAAGTTGCTGACGTTTGGTAACAACTACACCGGATGCAGTGAAATCTGCACTCTGTTTTTGCGCCCACAGTATC GCCAAGGCTTAAATGGTCGTTTGATGTCGAAATGCCGTTTTTTGATGATGGCGGAACACTCACACCGTTTTTCCAAAACC ATTTTTGCTGAGATGCGCGGCGTTTCCGATGCCGATGGCAATTCACCATTTTGGAAGTGGCTACAAGAGCACTTTTTCTC GATTGATTTCACTTTGGCCGATTATCTGACTGGAATTGGCAAAAAAGGCTTTATCGCTGACTTGATGCCCAAACTGCCAA TTTACGTCAACTTGCTGAGCAAAGAAGCGCAAGCGGTGATTGGTCAGGTGCATGAAAACACGCGACCTGCCTTGGTATTG CTTGAGAAAGAGGGTTTCACCTGTCGCAATTACGTCGACATTTTTGATGCGGGCCCAACCGTGGAATGTGAGCTGAACAA TATCGAATCGGTGCGCCACTCAGTACGCGCCATTGTTGAAGTGGCAGAACATTCGAGCTCGCAGAATTTCATTATGTGTA ACACCTCGTTTGAGAACTTCCGGGCTACGGCGGCCAAAGCCGCATACAGCCAAGAAGATAACGCGGTGATCATCTCCCCC AAAGTGGCCGCGGCGTTAGAAGTGAGCACGGGGGATTATTTACGGATTTTGGCGCAGTAG
Upstream 100 bases:
>100_bases TCGGAGGTTCGACGCTATCGCAAACTGCAGGATGACGTGAGGGGCGAAAGGTTCTCGCCCCGTGTACAATGCAGAGATTA CGCATCGGGAGGGAGTAAAG
Downstream 100 bases:
>100_bases GGGATAGCCATGACACATTGGATAGCCGGTGAATGGGTTGCGGGAACCGGTGAAAAGCTGGAATCACATACGCCTTATAG CCATGAGCTTTTATGGCAAG
Product: putative arginine/ornithine succinyltransferase
Products: NA
Alternate protein names: AST; AOST [H]
Number of amino acids: Translated: 339; Mature: 339
Protein sequence:
>339_residues MLVVRPISMADYEALHTCAVESGHGFTSLPVDQELLTNRITHSEYSFSKPNVTMPGDEGYLMVGVDTETGQVAGTTGIEA SIGWDVPFYSYHISTIVHSSPKLGVNNVVKLLTFGNNYTGCSEICTLFLRPQYRQGLNGRLMSKCRFLMMAEHSHRFSKT IFAEMRGVSDADGNSPFWKWLQEHFFSIDFTLADYLTGIGKKGFIADLMPKLPIYVNLLSKEAQAVIGQVHENTRPALVL LEKEGFTCRNYVDIFDAGPTVECELNNIESVRHSVRAIVEVAEHSSSQNFIMCNTSFENFRATAAKAAYSQEDNAVIISP KVAAALEVSTGDYLRILAQ
Sequences:
>Translated_339_residues MLVVRPISMADYEALHTCAVESGHGFTSLPVDQELLTNRITHSEYSFSKPNVTMPGDEGYLMVGVDTETGQVAGTTGIEA SIGWDVPFYSYHISTIVHSSPKLGVNNVVKLLTFGNNYTGCSEICTLFLRPQYRQGLNGRLMSKCRFLMMAEHSHRFSKT IFAEMRGVSDADGNSPFWKWLQEHFFSIDFTLADYLTGIGKKGFIADLMPKLPIYVNLLSKEAQAVIGQVHENTRPALVL LEKEGFTCRNYVDIFDAGPTVECELNNIESVRHSVRAIVEVAEHSSSQNFIMCNTSFENFRATAAKAAYSQEDNAVIISP KVAAALEVSTGDYLRILAQ >Mature_339_residues MLVVRPISMADYEALHTCAVESGHGFTSLPVDQELLTNRITHSEYSFSKPNVTMPGDEGYLMVGVDTETGQVAGTTGIEA SIGWDVPFYSYHISTIVHSSPKLGVNNVVKLLTFGNNYTGCSEICTLFLRPQYRQGLNGRLMSKCRFLMMAEHSHRFSKT IFAEMRGVSDADGNSPFWKWLQEHFFSIDFTLADYLTGIGKKGFIADLMPKLPIYVNLLSKEAQAVIGQVHENTRPALVL LEKEGFTCRNYVDIFDAGPTVECELNNIESVRHSVRAIVEVAEHSSSQNFIMCNTSFENFRATAAKAAYSQEDNAVIISP KVAAALEVSTGDYLRILAQ
Specific function: Catalyzes the transfer of succinyl-CoA to arginine to produce N(2)-succinylarginine [H]
COG id: COG3138
COG function: function code E; Arginine/ornithine N-succinyltransferase beta subunit
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the arginine N-succinyltransferase family [H]
Homologues:
Organism=Escherichia coli, GI1788043, Length=342, Percent_Identity=44.4444444444444, Blast_Score=292, Evalue=2e-80,
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016181 - InterPro: IPR007041 - InterPro: IPR017650 [H]
Pfam domain/function: PF04958 AstA [H]
EC number: =2.3.1.109 [H]
Molecular weight: Translated: 37575; Mature: 37575
Theoretical pI: Translated: 5.76; Mature: 5.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLVVRPISMADYEALHTCAVESGHGFTSLPVDQELLTNRITHSEYSFSKPNVTMPGDEGY CEEEECCCHHHHHHHHHHEEECCCCCCCCCCCHHHHHHHCCCCCCCCCCCCEECCCCCCE LMVGVDTETGQVAGTTGIEASIGWDVPFYSYHISTIVHSSPKLGVNNVVKLLTFGNNYTG EEEEECCCCCCEEECCCCCEECCCCCCHHHEEEEHHEECCCCCCHHHHEEEEECCCCCCC CSEICTLFLRPQYRQGLNGRLMSKCRFLMMAEHSHRFSKTIFAEMRGVSDADGNSPFWKW HHHHHHHHCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHH LQEHFFSIDFTLADYLTGIGKKGFIADLMPKLPIYVNLLSKEAQAVIGQVHENTRPALVL HHHHHHEEEEEHHHHHHCCCCCCCHHHHHCCCCEEEEHHHHHHHHHHHHHHCCCCCEEEE LEKEGFTCRNYVDIFDAGPTVECELNNIESVRHSVRAIVEVAEHSSSQNFIMCNTSFENF EECCCCEECCEEEEECCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHH RATAAKAAYSQEDNAVIISPKVAAALEVSTGDYLRILAQ HHHHHHHHCCCCCCEEEECCCCEEEEEECCCCEEEEEEC >Mature Secondary Structure MLVVRPISMADYEALHTCAVESGHGFTSLPVDQELLTNRITHSEYSFSKPNVTMPGDEGY CEEEECCCHHHHHHHHHHEEECCCCCCCCCCCHHHHHHHCCCCCCCCCCCCEECCCCCCE LMVGVDTETGQVAGTTGIEASIGWDVPFYSYHISTIVHSSPKLGVNNVVKLLTFGNNYTG EEEEECCCCCCEEECCCCCEECCCCCCHHHEEEEHHEECCCCCCHHHHEEEEECCCCCCC CSEICTLFLRPQYRQGLNGRLMSKCRFLMMAEHSHRFSKTIFAEMRGVSDADGNSPFWKW HHHHHHHHCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHH LQEHFFSIDFTLADYLTGIGKKGFIADLMPKLPIYVNLLSKEAQAVIGQVHENTRPALVL HHHHHHEEEEEHHHHHHCCCCCCCHHHHHCCCCEEEEHHHHHHHHHHHHHHCCCCCEEEE LEKEGFTCRNYVDIFDAGPTVECELNNIESVRHSVRAIVEVAEHSSSQNFIMCNTSFENF EECCCCEECCEEEEECCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHH RATAAKAAYSQEDNAVIISPKVAAALEVSTGDYLRILAQ HHHHHHHHCCCCCCEEEECCCCEEEEEECCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA