| Definition | Vibrio cholerae O395 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_009457 |
| Length | 3,024,069 |
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The map label for this gene is ybeL [H]
Identifier: 147675601
GI number: 147675601
Start: 512239
End: 512709
Strand: Direct
Name: ybeL [H]
Synonym: VC0395_A0479
Alternate gene names: 147675601
Gene position: 512239-512709 (Clockwise)
Preceding gene: 147674000
Following gene: 147674824
Centisome position: 16.94
GC content: 46.28
Gene sequence:
>471_bases ATGCCAAAACAGAAAGCAAGTTATGAAGCCTTACTGGAAGAGGTGGTAGAAACGCTCAAACACAGCCCAGATGGCGTGAA TGAGATCGTTGAATCCTCTACGAAATACGTCGATGCGGCGAATGATTTGACCAAGGATGAGCTTGCGCTGATCTCCGCTT ATGTAAAAGCTGACCTTAAAGAGTTCTCGCAAAGTTTTGAGCAAAGCAAAAGCAGCCCATTCTATCTGATGATCACTAAT TCCATCTGGCAGGGGCTACTGGATATTACCGACCGCACCAAAGTGGAATGGGTCGAACTGTTTGCTGATTTAGAACACCA AGGCTTGTATCAGGCGGGAGAAATGATTGGTTTGGGCGTGTTGATCTGTGATCAGTGCGGTCATAAAACCGAATTTAATC ACCCAACGGAAATTGAACCCTGTTCGCAATGTGGGGGTAAAGCGTTTAGCCGCCAACCACTGAAACCTTAG
Upstream 100 bases:
>100_bases TCAGTAGGAACGAAGTCTTTCGGTTCGGCATAGAATACAGAAAGCAGGGGGTTACAACAATAGCTAATCCGGCAGCCATC AGGCTTGAGAGAGGTGAGAG
Downstream 100 bases:
>100_bases TTGGATAAAGCGTTGCAATAAAAAACGGGAAGATAACTTCCCGTTTTACTTTTACTTATCTAGCCCGGCGCTGGCGCCAG AAAGCGAACCCAATCGCTAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 156; Mature: 155
Protein sequence:
>156_residues MPKQKASYEALLEEVVETLKHSPDGVNEIVESSTKYVDAANDLTKDELALISAYVKADLKEFSQSFEQSKSSPFYLMITN SIWQGLLDITDRTKVEWVELFADLEHQGLYQAGEMIGLGVLICDQCGHKTEFNHPTEIEPCSQCGGKAFSRQPLKP
Sequences:
>Translated_156_residues MPKQKASYEALLEEVVETLKHSPDGVNEIVESSTKYVDAANDLTKDELALISAYVKADLKEFSQSFEQSKSSPFYLMITN SIWQGLLDITDRTKVEWVELFADLEHQGLYQAGEMIGLGVLICDQCGHKTEFNHPTEIEPCSQCGGKAFSRQPLKP >Mature_155_residues PKQKASYEALLEEVVETLKHSPDGVNEIVESSTKYVDAANDLTKDELALISAYVKADLKEFSQSFEQSKSSPFYLMITNS IWQGLLDITDRTKVEWVELFADLEHQGLYQAGEMIGLGVLICDQCGHKTEFNHPTEIEPCSQCGGKAFSRQPLKP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1786863, Length=160, Percent_Identity=35.625, Blast_Score=118, Evalue=1e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009912 [H]
Pfam domain/function: PF07295 DUF1451 [H]
EC number: NA
Molecular weight: Translated: 17459; Mature: 17328
Theoretical pI: Translated: 4.45; Mature: 4.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPKQKASYEALLEEVVETLKHSPDGVNEIVESSTKYVDAANDLTKDELALISAYVKADLK CCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH EFSQSFEQSKSSPFYLMITNSIWQGLLDITDRTKVEWVELFADLEHQGLYQAGEMIGLGV HHHHHHHHCCCCCEEEEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH LICDQCGHKTEFNHPTEIEPCSQCGGKAFSRQPLKP HHHHCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCC >Mature Secondary Structure PKQKASYEALLEEVVETLKHSPDGVNEIVESSTKYVDAANDLTKDELALISAYVKADLK CCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH EFSQSFEQSKSSPFYLMITNSIWQGLLDITDRTKVEWVELFADLEHQGLYQAGEMIGLGV HHHHHHHHCCCCCEEEEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH LICDQCGHKTEFNHPTEIEPCSQCGGKAFSRQPLKP HHHHCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]