| Definition | Vibrio cholerae O395 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_009457 |
| Length | 3,024,069 |
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The map label for this gene is menE [H]
Identifier: 147675543
GI number: 147675543
Start: 1674948
End: 1676378
Strand: Reverse
Name: menE [H]
Synonym: VC0395_A1557
Alternate gene names: 147675543
Gene position: 1676378-1674948 (Counterclockwise)
Preceding gene: 147673492
Following gene: 147674892
Centisome position: 55.43
GC content: 52.55
Gene sequence:
>1431_bases ATGGCGCTCGGAATCTTCCCTGTGAGCCTTTGGCAGCCTTGGCTTGAGCGTGACCCCAAGCAGGTTGCGCTGAGTCATGC TGGGCAAACCCTGACTTGGCAAGTATTAGATAGCCAAGTAGCGCACTACGCTAAAGCGCTGCGTGAGCAAGGGGTTCGGT CGGGGGAAGTGGTGACGCTGGTCGGGAAAAATCATCTGCACACTGTGCTGTGGTTTTTGGCTTGTACTCAAGTGGGCGCG CTGTGCACCTTTGTCGCACCACAACCTTTAGCTCTTTTGCAGGAAAAGCTCGCCACACTCTATGCCGAGCAAAGCCCGAA GCACCTTTGGCTAGCGCCTTCTTGCGCGCTGAGTGAAGAAGAGATTGCGGAGCTTAATGCTCATCGCCTGAGTTTGCCCG ATGAGCGGGATGAATCCGTTGGTGGCGAGAAAGTCTCTAGCCAGTTTTCTTGTGAACAACTGGCGACGTTAATTTTCACC TCGGGTTCGACGGGGACACCTAAAGCGGTGACTCACACTCATCAGCAACATTTGGCTTCGGCGCGCGGTTTACTGAACAA GTTTGCTTTTACCGAGTCAGACAGTTGGTTACTGAGCTTGCCGCTGTATCATATTTCTGGTGTGGCCATTCTTTATCGTT GGCTTGCTGTCGGAGCGACACTCAAGATCGGCACTGGCGATCTGCAAAACGATATTGCTGGCGTCACTCATGCTTCATTG GTGCCTACTCAGCTTAAACGTCTGTTGGACAGCAGCTCTCCATTGACGCTCAAACGTGTTCTGCTCGGCGGCAGCCATAT CCCTGTTGAACTCGCTCAAATGGCGGCAACGCGTGGTATTGATACTTGGCTCGGCTATGGCATGACCGAAGCCGCCTCCA CCGTGACGGCAAAGCGGGTCGATGGACTTGCAGGTAATGGTGAGCTTTTGGATCATCGTGAGCTGCGCCTTGTTGATGGG CGGATTTTCATTGCTGGGAAGACGTTGGCACAAGGCTATTATTGGCAAGGGCAGCTAGTTCCGCTCACTAATGAGCAGGG TTGGTTTGACAGCAAAGATCTCGGTCGCTGGCAGGGCAATAACCTGTTGATTGATGGCCGAGCGGATAATCTTTTTATCT CTGGCGGTGAAAATGTTCACTGTGAAGAAATAGAAGCGGTGTTAAACCAGCACCCTCATGTGCAAGTGGCGATCGTAATA CCCGTTCAAGATAGTGAGTTTGGTGCGCGACCCGTCGCCGTGATTCGTAGTGAGGCCGAGTGGTGTCAAGCCATCGGTGA TACTTGGTGCCAAGCTAAACTCGAAAAATTCAAATGGCCTATCATGTACTTTTTACTCCCCGATGCTTTGCTGGATGGGG GAATTAAAGTCTCTCGTGCGGCGGTGAAAGCGTGGTTGGCCGCCAACCAAACGCAGTTCACTCCGCTATAA
Upstream 100 bases:
>100_bases TACCGGGACTGGATACGATGGGATTATTCCGAACTCAGCTCGAAACGCCTTGGCCAAATAGCTCACTGCCTGTGGTTGCC CTGCAAGAGCAGTCAATCGT
Downstream 100 bases:
>100_bases GATTAAACCTATCCGCTGCTGGTTGAGTTTATGGTCGCGGGCGAGTCGTCAACCGTAAGTACGCCAATCCGATCACAAGG CCAATCAGCGTCGCGCTCAT
Product: O-succinylbenzoic acid--CoA ligase
Products: NA
Alternate protein names: o-succinylbenzoyl-CoA synthetase; OSB-CoA synthetase [H]
Number of amino acids: Translated: 476; Mature: 475
Protein sequence:
>476_residues MALGIFPVSLWQPWLERDPKQVALSHAGQTLTWQVLDSQVAHYAKALREQGVRSGEVVTLVGKNHLHTVLWFLACTQVGA LCTFVAPQPLALLQEKLATLYAEQSPKHLWLAPSCALSEEEIAELNAHRLSLPDERDESVGGEKVSSQFSCEQLATLIFT SGSTGTPKAVTHTHQQHLASARGLLNKFAFTESDSWLLSLPLYHISGVAILYRWLAVGATLKIGTGDLQNDIAGVTHASL VPTQLKRLLDSSSPLTLKRVLLGGSHIPVELAQMAATRGIDTWLGYGMTEAASTVTAKRVDGLAGNGELLDHRELRLVDG RIFIAGKTLAQGYYWQGQLVPLTNEQGWFDSKDLGRWQGNNLLIDGRADNLFISGGENVHCEEIEAVLNQHPHVQVAIVI PVQDSEFGARPVAVIRSEAEWCQAIGDTWCQAKLEKFKWPIMYFLLPDALLDGGIKVSRAAVKAWLAANQTQFTPL
Sequences:
>Translated_476_residues MALGIFPVSLWQPWLERDPKQVALSHAGQTLTWQVLDSQVAHYAKALREQGVRSGEVVTLVGKNHLHTVLWFLACTQVGA LCTFVAPQPLALLQEKLATLYAEQSPKHLWLAPSCALSEEEIAELNAHRLSLPDERDESVGGEKVSSQFSCEQLATLIFT SGSTGTPKAVTHTHQQHLASARGLLNKFAFTESDSWLLSLPLYHISGVAILYRWLAVGATLKIGTGDLQNDIAGVTHASL VPTQLKRLLDSSSPLTLKRVLLGGSHIPVELAQMAATRGIDTWLGYGMTEAASTVTAKRVDGLAGNGELLDHRELRLVDG RIFIAGKTLAQGYYWQGQLVPLTNEQGWFDSKDLGRWQGNNLLIDGRADNLFISGGENVHCEEIEAVLNQHPHVQVAIVI PVQDSEFGARPVAVIRSEAEWCQAIGDTWCQAKLEKFKWPIMYFLLPDALLDGGIKVSRAAVKAWLAANQTQFTPL >Mature_475_residues ALGIFPVSLWQPWLERDPKQVALSHAGQTLTWQVLDSQVAHYAKALREQGVRSGEVVTLVGKNHLHTVLWFLACTQVGAL CTFVAPQPLALLQEKLATLYAEQSPKHLWLAPSCALSEEEIAELNAHRLSLPDERDESVGGEKVSSQFSCEQLATLIFTS GSTGTPKAVTHTHQQHLASARGLLNKFAFTESDSWLLSLPLYHISGVAILYRWLAVGATLKIGTGDLQNDIAGVTHASLV PTQLKRLLDSSSPLTLKRVLLGGSHIPVELAQMAATRGIDTWLGYGMTEAASTVTAKRVDGLAGNGELLDHRELRLVDGR IFIAGKTLAQGYYWQGQLVPLTNEQGWFDSKDLGRWQGNNLLIDGRADNLFISGGENVHCEEIEAVLNQHPHVQVAIVIP VQDSEFGARPVAVIRSEAEWCQAIGDTWCQAKLEKFKWPIMYFLLPDALLDGGIKVSRAAVKAWLAANQTQFTPL
Specific function: Converts 2-succinylbenzoate (OSB) to 2-succinylbenzoyl- CoA (OSB-CoA) [H]
COG id: COG0318
COG function: function code IQ; Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ATP-dependent AMP-binding enzyme family. MenE subfamily [H]
Homologues:
Organism=Escherichia coli, GI1788595, Length=467, Percent_Identity=40.8993576017131, Blast_Score=306, Evalue=2e-84, Organism=Escherichia coli, GI145693145, Length=493, Percent_Identity=24.5436105476673, Blast_Score=110, Evalue=2e-25, Organism=Escherichia coli, GI221142682, Length=480, Percent_Identity=21.875, Blast_Score=73, Evalue=5e-14, Organism=Escherichia coli, GI1789201, Length=266, Percent_Identity=27.0676691729323, Blast_Score=70, Evalue=4e-13, Organism=Escherichia coli, GI1788107, Length=336, Percent_Identity=26.1904761904762, Blast_Score=67, Evalue=3e-12, Organism=Caenorhabditis elegans, GI17558820, Length=493, Percent_Identity=26.369168356998, Blast_Score=115, Evalue=5e-26, Organism=Caenorhabditis elegans, GI32563687, Length=469, Percent_Identity=25.7995735607676, Blast_Score=100, Evalue=2e-21, Organism=Caenorhabditis elegans, GI71994694, Length=320, Percent_Identity=23.75, Blast_Score=77, Evalue=2e-14, Organism=Caenorhabditis elegans, GI71994690, Length=320, Percent_Identity=23.75, Blast_Score=77, Evalue=2e-14, Organism=Caenorhabditis elegans, GI71994703, Length=320, Percent_Identity=23.75, Blast_Score=77, Evalue=2e-14, Organism=Caenorhabditis elegans, GI17560308, Length=473, Percent_Identity=23.0443974630021, Blast_Score=74, Evalue=2e-13, Organism=Drosophila melanogaster, GI24581924, Length=516, Percent_Identity=23.4496124031008, Blast_Score=87, Evalue=2e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020845 - InterPro: IPR000873 - InterPro: IPR010192 [H]
Pfam domain/function: PF00501 AMP-binding [H]
EC number: =6.2.1.26 [H]
Molecular weight: Translated: 52134; Mature: 52003
Theoretical pI: Translated: 6.41; Mature: 6.41
Prosite motif: PS00455 AMP_BINDING
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALGIFPVSLWQPWLERDPKQVALSHAGQTLTWQVLDSQVAHYAKALREQGVRSGEVVTL CCEEEEEHHHHCHHHHCCHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHCCCCCCCEEEE VGKNHLHTVLWFLACTQVGALCTFVAPQPLALLQEKLATLYAEQSPKHLWLAPSCALSEE ECCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCHH EIAELNAHRLSLPDERDESVGGEKVSSQFSCEQLATLIFTSGSTGTPKAVTHTHQQHLAS HHHHHCHHCCCCCCCCCCCCCCHHHHHHCCHHHHHHHEEECCCCCCCHHHHHHHHHHHHH ARGLLNKFAFTESDSWLLSLPLYHISGVAILYRWLAVGATLKIGTGDLQNDIAGVTHASL HHHHHHHHHCCCCCCEEEEECHHHHHHHHHHHHHHHHCCEEEECCCCHHHHHHCCHHHHH VPTQLKRLLDSSSPLTLKRVLLGGSHIPVELAQMAATRGIDTWLGYGMTEAASTVTAKRV HHHHHHHHHCCCCCHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHH DGLAGNGELLDHRELRLVDGRIFIAGKTLAQGYYWQGQLVPLTNEQGWFDSKDLGRWQGN CCCCCCCCCCCCCCEEEECCEEEEEECHHHCCEEECCEEEEECCCCCCCCCCCCCCCCCC NLLIDGRADNLFISGGENVHCEEIEAVLNQHPHVQVAIVIPVQDSEFGARPVAVIRSEAE EEEEECCCCEEEEECCCCCCHHHHHHHHCCCCCEEEEEEEEECCCCCCCCCHHHHHCHHH WCQAIGDTWCQAKLEKFKWPIMYFLLPDALLDGGIKVSRAAVKAWLAANQTQFTPL HHHHHHHHHHHHHHHHHCCCEEEEECHHHHHCCCCHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure ALGIFPVSLWQPWLERDPKQVALSHAGQTLTWQVLDSQVAHYAKALREQGVRSGEVVTL CEEEEEHHHHCHHHHCCHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHCCCCCCCEEEE VGKNHLHTVLWFLACTQVGALCTFVAPQPLALLQEKLATLYAEQSPKHLWLAPSCALSEE ECCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCHH EIAELNAHRLSLPDERDESVGGEKVSSQFSCEQLATLIFTSGSTGTPKAVTHTHQQHLAS HHHHHCHHCCCCCCCCCCCCCCHHHHHHCCHHHHHHHEEECCCCCCCHHHHHHHHHHHHH ARGLLNKFAFTESDSWLLSLPLYHISGVAILYRWLAVGATLKIGTGDLQNDIAGVTHASL HHHHHHHHHCCCCCCEEEEECHHHHHHHHHHHHHHHHCCEEEECCCCHHHHHHCCHHHHH VPTQLKRLLDSSSPLTLKRVLLGGSHIPVELAQMAATRGIDTWLGYGMTEAASTVTAKRV HHHHHHHHHCCCCCHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHH DGLAGNGELLDHRELRLVDGRIFIAGKTLAQGYYWQGQLVPLTNEQGWFDSKDLGRWQGN CCCCCCCCCCCCCCEEEECCEEEEEECHHHCCEEECCEEEEECCCCCCCCCCCCCCCCCC NLLIDGRADNLFISGGENVHCEEIEAVLNQHPHVQVAIVIPVQDSEFGARPVAVIRSEAE EEEEECCCCEEEEECCCCCCHHHHHHHHCCCCCEEEEEEEEECCCCCCCCCHHHHHCHHH WCQAIGDTWCQAKLEKFKWPIMYFLLPDALLDGGIKVSRAAVKAWLAANQTQFTPL HHHHHHHHHHHHHHHHHCCCEEEEECHHHHHCCCCHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11677609; 8206837 [H]