| Definition | Vibrio cholerae O395 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_009457 |
| Length | 3,024,069 |
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The map label for this gene is eda [H]
Identifier: 147675527
GI number: 147675527
Start: 2819358
End: 2819963
Strand: Reverse
Name: eda [H]
Synonym: VC0395_A2663
Alternate gene names: 147675527
Gene position: 2819963-2819358 (Counterclockwise)
Preceding gene: 147674889
Following gene: 147673813
Centisome position: 93.25
GC content: 54.95
Gene sequence:
>606_bases ATGACCATTGAACAACGCTTACGAGCGATCAAAATTGTCCCTGTTATTGCGATTAATGATGTCGCCCACGCACTGCCACT GGCCAAAGTGCTGGTTGAAAACGGTTTGCCTTGTGCAGAAGTCACTTTCCGCACCGCTGCGGCCGCGGAATCGATTCGCA TCATGCGTGAGGCGTATCCAGACCTGCTGATTGGCGCAGGCACTGTACTCACGACAGCGCAAGTGGATGAAGCGATTGCG GCGGGAGCTGATTTCATCGTGAGCCCGGGTCTGAACCCGACCACAGTGAAATACTGCCAACAGCGCAATATCGCGATCAT TCCGGGCGTCAACAACCCAAGTTTGGTGGAACAGGCCATGGAAATGGGTCTGCGTACCCTAAAGTTCTTCCCGGCCGAGC CATCTGGCGGCATTGCGATGCTGAAAGCGCTGAGCGCGGTGTACCCAGTGAGCTTTATGCCAACGGGGGGTATCAATCCA AACAATGCGCAAGAGTATCTGGCGCTCAAATCGGTTGTCGCGTGTGGTGGCACTTGGATGGTACCAACTGACCTGATGGA CAAAGGCGACTGGGACACCCTCGCCGAACTCGTACGCAACGTATAA
Upstream 100 bases:
>100_bases AACCACTCTAAAAACGTGGACTGTGATGGAAACCCTTTTGGGCGGTATCGCCTTCCTGATTGTGGCAACACTCAGCTTTA TTCTGTAGAGGTATGGACTC
Downstream 100 bases:
>100_bases GCCTTTTCGGCTCGTTCCCCCACCAAAGACCAAACGCTCCGTTTGGTCTTTTTTATATTGCGCGTTAACTCGTTGAGCAG AATGAGATATCACCTACAAG
Product: keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase
Products: NA
Alternate protein names: 4-hydroxy-2-oxoglutarate aldolase; 2-keto-4-hydroxyglutarate aldolase; KHG-aldolase; 2-dehydro-3-deoxy-phosphogluconate aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG-aldolase; Phospho-2-dehydro-3-deoxygluconate aldolase; Phospho-2-keto-3-deoxygluconate aldolase [H]
Number of amino acids: Translated: 201; Mature: 200
Protein sequence:
>201_residues MTIEQRLRAIKIVPVIAINDVAHALPLAKVLVENGLPCAEVTFRTAAAAESIRIMREAYPDLLIGAGTVLTTAQVDEAIA AGADFIVSPGLNPTTVKYCQQRNIAIIPGVNNPSLVEQAMEMGLRTLKFFPAEPSGGIAMLKALSAVYPVSFMPTGGINP NNAQEYLALKSVVACGGTWMVPTDLMDKGDWDTLAELVRNV
Sequences:
>Translated_201_residues MTIEQRLRAIKIVPVIAINDVAHALPLAKVLVENGLPCAEVTFRTAAAAESIRIMREAYPDLLIGAGTVLTTAQVDEAIA AGADFIVSPGLNPTTVKYCQQRNIAIIPGVNNPSLVEQAMEMGLRTLKFFPAEPSGGIAMLKALSAVYPVSFMPTGGINP NNAQEYLALKSVVACGGTWMVPTDLMDKGDWDTLAELVRNV >Mature_200_residues TIEQRLRAIKIVPVIAINDVAHALPLAKVLVENGLPCAEVTFRTAAAAESIRIMREAYPDLLIGAGTVLTTAQVDEAIAA GADFIVSPGLNPTTVKYCQQRNIAIIPGVNNPSLVEQAMEMGLRTLKFFPAEPSGGIAMLKALSAVYPVSFMPTGGINPN NAQEYLALKSVVACGGTWMVPTDLMDKGDWDTLAELVRNV
Specific function: KEY ENZYME IN THE ENTNER-DOUDOROFF PATHWAY. PARTICIPATES IN THE REGULATION OF THE INTRACELLULAR LEVEL OF GLYOXYLATE. [C]
COG id: COG0800
COG function: function code G; 2-keto-3-deoxy-6-phosphogluconate aldolase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the KHG/KDPG aldolase family [H]
Homologues:
Organism=Escherichia coli, GI1788156, Length=179, Percent_Identity=44.1340782122905, Blast_Score=161, Evalue=3e-41, Organism=Escherichia coli, GI48994954, Length=148, Percent_Identity=29.7297297297297, Blast_Score=65, Evalue=2e-12,
Paralogues:
None
Copy number: 2,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000887 - InterPro: IPR013785 [H]
Pfam domain/function: PF01081 Aldolase [H]
EC number: =4.1.3.16; =4.1.2.14 [H]
Molecular weight: Translated: 21405; Mature: 21274
Theoretical pI: Translated: 4.76; Mature: 4.76
Prosite motif: PS00159 ALDOLASE_KDPG_KHG_1 ; PS00160 ALDOLASE_KDPG_KHG_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIEQRLRAIKIVPVIAINDVAHALPLAKVLVENGLPCAEVTFRTAAAAESIRIMREAYP CCHHHHHHHHHHHHEEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCC DLLIGAGTVLTTAQVDEAIAAGADFIVSPGLNPTTVKYCQQRNIAIIPGVNNPSLVEQAM HHEECCCHHHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHCCCEEEEECCCCHHHHHHHH EMGLRTLKFFPAEPSGGIAMLKALSAVYPVSFMPTGGINPNNAQEYLALKSVVACGGTWM HHHHHHHHCCCCCCCCCHHHHHHHHHHCCCEECCCCCCCCCCHHHHHHHHHHHHCCCCEE VPTDLMDKGDWDTLAELVRNV CCHHHCCCCCHHHHHHHHHCC >Mature Secondary Structure TIEQRLRAIKIVPVIAINDVAHALPLAKVLVENGLPCAEVTFRTAAAAESIRIMREAYP CHHHHHHHHHHHHEEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCC DLLIGAGTVLTTAQVDEAIAAGADFIVSPGLNPTTVKYCQQRNIAIIPGVNNPSLVEQAM HHEECCCHHHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHCCCEEEEECCCCHHHHHHHH EMGLRTLKFFPAEPSGGIAMLKALSAVYPVSFMPTGGINPNNAQEYLALKSVVACGGTWM HHHHHHHHCCCCCCCCCHHHHHHHHHHCCCEECCCCCCCCCCHHHHHHHHHHHHCCCCEE VPTDLMDKGDWDTLAELVRNV CCHHHCCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]