| Definition | Vibrio cholerae O395 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_009457 |
| Length | 3,024,069 |
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The map label for this gene is 147675494
Identifier: 147675494
GI number: 147675494
Start: 705656
End: 706168
Strand: Direct
Name: 147675494
Synonym: VC0395_A0677
Alternate gene names: NA
Gene position: 705656-706168 (Clockwise)
Preceding gene: 147675335
Following gene: 147673954
Centisome position: 23.33
GC content: 49.71
Gene sequence:
>513_bases ATGATCTATGAAGCCCCCTTAACTTCAGGTTCAGACGCGCATCGACATAAGAGCGAAGTGTTGTTTGACTTTTCCGCATC ACCTTTGGTGTTCACGCAGGGGGTGACATACAACTTGATTGACCGCATCAAAGCCGCAGCGCCGATATTCGGCAGCTTGC TGCCGTTCTTTGATACAGCAGCCAATCTGCTGCGCAGTTTTAACGATGACGCCAGCTTGCACTTTAAAGCAAACTTTATC GGTAGCTTTCCAGGCTCTGCGGCAACCCGTTCATTGGAGCTGGATTTTTTAGGCACTGAAGGCAACCGACTGGTGCAGAA CCGGAGCTTAGAAGTGGATGAGGATGTGATGACGTTCTCGACTTTCTTCAGTGTCGATAAAAACGGAAACATTGCGACCA ATGGCACGGCCATACAAATTCGCGCTAATGGCCGCGACTTTACTTGCACTAAGCTGTTGTTGATCGCAGAGCAAGAAACC TACTCAACGGAGATACTAGGGGGTGGTGCGTGA
Upstream 100 bases:
>100_bases CAATGCTAGCGCAAAAGCGTTATGTGTATGAGCTAACAGGCAGTGATCTGGTTTGGGCTAAAACCAACAGTGGTGAAACC ACGGTAGGAGTAACGCCTGC
Downstream 100 bases:
>100_bases TTTATGAAGAAAGTGGATGCGAGCCAGTCACCTATGTTGAATCAAGTGCATTGCGTTGTGAGCGTCTTTCTCTACCTGCT TCTGAGCTTTACTACCCAAG
Product: hypothetical protein
Products: NA
Alternate protein names: Packaged DNA Stabilization Protein Gp
Number of amino acids: Translated: 170; Mature: 170
Protein sequence:
>170_residues MIYEAPLTSGSDAHRHKSEVLFDFSASPLVFTQGVTYNLIDRIKAAAPIFGSLLPFFDTAANLLRSFNDDASLHFKANFI GSFPGSAATRSLELDFLGTEGNRLVQNRSLEVDEDVMTFSTFFSVDKNGNIATNGTAIQIRANGRDFTCTKLLLIAEQET YSTEILGGGA
Sequences:
>Translated_170_residues MIYEAPLTSGSDAHRHKSEVLFDFSASPLVFTQGVTYNLIDRIKAAAPIFGSLLPFFDTAANLLRSFNDDASLHFKANFI GSFPGSAATRSLELDFLGTEGNRLVQNRSLEVDEDVMTFSTFFSVDKNGNIATNGTAIQIRANGRDFTCTKLLLIAEQET YSTEILGGGA >Mature_170_residues MIYEAPLTSGSDAHRHKSEVLFDFSASPLVFTQGVTYNLIDRIKAAAPIFGSLLPFFDTAANLLRSFNDDASLHFKANFI GSFPGSAATRSLELDFLGTEGNRLVQNRSLEVDEDVMTFSTFFSVDKNGNIATNGTAIQIRANGRDFTCTKLLLIAEQET YSTEILGGGA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18484; Mature: 18484
Theoretical pI: Translated: 4.61; Mature: 4.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIYEAPLTSGSDAHRHKSEVLFDFSASPLVFTQGVTYNLIDRIKAAAPIFGSLLPFFDTA CEECCCCCCCCCCHHCCCEEEEECCCCCEEEECCCCHHHHHHHHHHCCHHHHHHHHHHHH ANLLRSFNDDASLHFKANFIGSFPGSAATRSLELDFLGTEGNRLVQNRSLEVDEDVMTFS HHHHHHCCCCCEEEEEEEEEECCCCCCCCEEEEEEEECCCCCEEEECCCCCCCCHHHEEE TFFSVDKNGNIATNGTAIQIRANGRDFTCTKLLLIAEQETYSTEILGGGA EEEEECCCCCEEECCEEEEEEECCCCEEEEEEEEEECCCCCCEEEECCCC >Mature Secondary Structure MIYEAPLTSGSDAHRHKSEVLFDFSASPLVFTQGVTYNLIDRIKAAAPIFGSLLPFFDTA CEECCCCCCCCCCHHCCCEEEEECCCCCEEEECCCCHHHHHHHHHHCCHHHHHHHHHHHH ANLLRSFNDDASLHFKANFIGSFPGSAATRSLELDFLGTEGNRLVQNRSLEVDEDVMTFS HHHHHHCCCCCEEEEEEEEEECCCCCCCCEEEEEEEECCCCCEEEECCCCCCCCHHHEEE TFFSVDKNGNIATNGTAIQIRANGRDFTCTKLLLIAEQETYSTEILGGGA EEEEECCCCCEEECCEEEEEEECCCCEEEEEEEEEECCCCCCEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA