| Definition | Vibrio cholerae O395 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_009457 |
| Length | 3,024,069 |
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The map label for this gene is yfcL [H]
Identifier: 147675483
GI number: 147675483
Start: 1823412
End: 1823675
Strand: Reverse
Name: yfcL [H]
Synonym: VC0395_A1696
Alternate gene names: 147675483
Gene position: 1823675-1823412 (Counterclockwise)
Preceding gene: 147673720
Following gene: 147675722
Centisome position: 60.31
GC content: 51.89
Gene sequence:
>264_bases ATGATTATTGAATTTGAAGAGAAACTGCTGGATCTGATTGATGCACAAGTCGTTAACGCGTCCAGTGATGAGCTGTTTGC GGGTGGCTATTTACGTGGACACATTTCACTTTCTGCGGCGCAGTGTGAAGAGGAAGGGATCACCGAACTTGATGTGCTCA AGCAACGCATTGAGCAAAGTTTAGAGGCGGCACGCTCAGAGTTGAGCCCTGCCGACCGCGCGATTGTGGCTGAGCTTTGG CAACAGCTGGCCGCGCAGGCGTAA
Upstream 100 bases:
>100_bases AGGCGTTACGCGCTTTTTACCAAACGCCCGCCTTACTGCCTGAACACTTTGCGGTTAAATAACCCTAGGTGAAAACCATT TATCCATTAACGAGAAGCTG
Downstream 100 bases:
>100_bases CCAAACCATCCAGTTTGATCGCGAAAGCCACTATCATTAGGGCAAGCAGTAGGGCAAGGCTTTCGCGATTTCCCACGTTT TCGCTCCACTCTCCAGTGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 87; Mature: 87
Protein sequence:
>87_residues MIIEFEEKLLDLIDAQVVNASSDELFAGGYLRGHISLSAAQCEEEGITELDVLKQRIEQSLEAARSELSPADRAIVAELW QQLAAQA
Sequences:
>Translated_87_residues MIIEFEEKLLDLIDAQVVNASSDELFAGGYLRGHISLSAAQCEEEGITELDVLKQRIEQSLEAARSELSPADRAIVAELW QQLAAQA >Mature_87_residues MIIEFEEKLLDLIDAQVVNASSDELFAGGYLRGHISLSAAQCEEEGITELDVLKQRIEQSLEAARSELSPADRAIVAELW QQLAAQA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1788665, Length=89, Percent_Identity=47.1910112359551, Blast_Score=78, Evalue=1e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014987 [H]
Pfam domain/function: PF08891 YfcL [H]
EC number: NA
Molecular weight: Translated: 9557; Mature: 9557
Theoretical pI: Translated: 3.92; Mature: 3.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIIEFEEKLLDLIDAQVVNASSDELFAGGYLRGHISLSAAQCEEEGITELDVLKQRIEQS CCCCHHHHHHHHHHHHHHCCCCCCEEECCEEEHHHHHHHHHHHHCCCHHHHHHHHHHHHH LEAARSELSPADRAIVAELWQQLAAQA HHHHHHHCCCCHHHHHHHHHHHHHCCC >Mature Secondary Structure MIIEFEEKLLDLIDAQVVNASSDELFAGGYLRGHISLSAAQCEEEGITELDVLKQRIEQS CCCCHHHHHHHHHHHHHHCCCCCCEEECCEEEHHHHHHHHHHHHCCCHHHHHHHHHHHHH LEAARSELSPADRAIVAELWQQLAAQA HHHHHHHCCCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]