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The map label for this gene is 147675478

Identifier: 147675478

GI number: 147675478

Start: 414965

End: 415519

Strand: Direct

Name: 147675478

Synonym: VC0395_A0385

Alternate gene names: NA

Gene position: 414965-415519 (Clockwise)

Preceding gene: 147674389

Following gene: 147674851

Centisome position: 13.72

GC content: 42.7

Gene sequence:

>555_bases
TTGATTCATCATCCTCTCACGGTTTGCAAAGGATTTTGGGAAATGCATCGCGGCTTTACTTTGCTGGAGCTTTTGATCAC
CGTTGCGGTATTAACCACAATGTTGCTTTTTGCTGCCCCCAATTTCTCAAAGGTGAGCCAGCAAACGAAGATGACCAATT
TAGCCAATGAATTACAGGGATTCCTTATTCAAGCTAAATCTGAAGCTGTTTTTCGAAATCAGGACTTATGGGTGCATATT
CAAGGATTGCCTTCTATAACGGGTCAATGGCAACTGGTGCTATCCAGCGTATCGGATGTGGCAGCGATCGATGCAAGTAA
TACGGTTGCTCTGTTGCAAGGTCAGCGATATCAAAATGTATTTGTATCGAAGACCAATACACTAACAGAGGTCAAATTTG
ATCATGTAATGGGCAATCCTCAGGAAGCAGGTAGCCTTTTTATTAAACCGTCGGAATCTGCTGCAGATTCAATCAAAGTG
ACTGTGCACAATCGGGCTGGACGAATCAAAGTTTGCACCGAAAATGAGGCAAAATATGGCTTTGAAAAGTGCTAA

Upstream 100 bases:

>100_bases
GCTGACTCACACTTGGCTTGCAGAAAATTTTTCGAATCATTTCCATTACTTCTCTTTATAAAACAACGCCATTTTTGATA
GCTGTTAGCATCTATGCAAG

Downstream 100 bases:

>100_bases
CCAGCAAGGTAATACGCTGATTGAATTTATGGTTGCCGCTTTGGTGGGGGCGATGGCTTTAGCTATTGTCGGGACTGTCT
TTTTGTCTAACCAAAAAGCG

Product: putative type IV pilin

Products: NA

Alternate protein names: Type IV Pilin; Type 4 Fimbrial Biogenesis Protein FimT; Pili Retraction Protein PilT

Number of amino acids: Translated: 184; Mature: 184

Protein sequence:

>184_residues
MIHHPLTVCKGFWEMHRGFTLLELLITVAVLTTMLLFAAPNFSKVSQQTKMTNLANELQGFLIQAKSEAVFRNQDLWVHI
QGLPSITGQWQLVLSSVSDVAAIDASNTVALLQGQRYQNVFVSKTNTLTEVKFDHVMGNPQEAGSLFIKPSESAADSIKV
TVHNRAGRIKVCTENEAKYGFEKC

Sequences:

>Translated_184_residues
MIHHPLTVCKGFWEMHRGFTLLELLITVAVLTTMLLFAAPNFSKVSQQTKMTNLANELQGFLIQAKSEAVFRNQDLWVHI
QGLPSITGQWQLVLSSVSDVAAIDASNTVALLQGQRYQNVFVSKTNTLTEVKFDHVMGNPQEAGSLFIKPSESAADSIKV
TVHNRAGRIKVCTENEAKYGFEKC
>Mature_184_residues
MIHHPLTVCKGFWEMHRGFTLLELLITVAVLTTMLLFAAPNFSKVSQQTKMTNLANELQGFLIQAKSEAVFRNQDLWVHI
QGLPSITGQWQLVLSSVSDVAAIDASNTVALLQGQRYQNVFVSKTNTLTEVKFDHVMGNPQEAGSLFIKPSESAADSIKV
TVHNRAGRIKVCTENEAKYGFEKC

Specific function: Unknown

COG id: COG4970

COG function: function code NU; Tfp pilus assembly protein FimT

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20423; Mature: 20423

Theoretical pI: Translated: 8.11; Mature: 8.11

Prosite motif: PS00409 PROKAR_NTER_METHYL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIHHPLTVCKGFWEMHRGFTLLELLITVAVLTTMLLFAAPNFSKVSQQTKMTNLANELQG
CCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
FLIQAKSEAVFRNQDLWVHIQGLPSITGQWQLVLSSVSDVAAIDASNTVALLQGQRYQNV
HEEECCCCHHEECCCEEEEEECCCCCCCHHHHHHHHHHHHEEECCCCEEEEEECCCCCEE
FVSKTNTLTEVKFDHVMGNPQEAGSLFIKPSESAADSIKVTVHNRAGRIKVCTENEAKYG
EEECCCCEEEEEHHHHCCCCCCCCEEEEECCCCCCCEEEEEEECCCCEEEEEECCCCCCC
FEKC
CCCC
>Mature Secondary Structure
MIHHPLTVCKGFWEMHRGFTLLELLITVAVLTTMLLFAAPNFSKVSQQTKMTNLANELQG
CCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
FLIQAKSEAVFRNQDLWVHIQGLPSITGQWQLVLSSVSDVAAIDASNTVALLQGQRYQNV
HEEECCCCHHEECCCEEEEEECCCCCCCHHHHHHHHHHHHEEECCCCEEEEEECCCCCEE
FVSKTNTLTEVKFDHVMGNPQEAGSLFIKPSESAADSIKVTVHNRAGRIKVCTENEAKYG
EEECCCCEEEEEHHHHCCCCCCCCEEEEECCCCCCCEEEEEEECCCCEEEEEECCCCCCC
FEKC
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA