| Definition | Vibrio cholerae O395 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_009457 |
| Length | 3,024,069 |
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The map label for this gene is yeaC [H]
Identifier: 147675465
GI number: 147675465
Start: 1703239
End: 1703526
Strand: Reverse
Name: yeaC [H]
Synonym: VC0395_A1581
Alternate gene names: 147675465
Gene position: 1703526-1703239 (Counterclockwise)
Preceding gene: 147673659
Following gene: 147675393
Centisome position: 56.33
GC content: 48.26
Gene sequence:
>288_bases ATGGACACCCAACAACTGATTAATGCGATTACGCCTGAAGCTTATCAGCGCCTACTGTACGCCGTAGAAACGGGCAAGTG GCCTGAGGGTACACCACTTTCACAACAGCAGCGAGATTCCTGTATGCAAGCTGTGATGTTGTATCAATCTAAGCATAATA CACAGGCAGACCATATGTCGGTTGGCGTGGGAGGCGAGGTGGTTTTTAAATCCAAAGCGGAACTGAAAAAGCGTTTTTCG GAAGGGGAAGAGGATATTCTGCGCGTTAACCCCAACCAAGAGGCATAA
Upstream 100 bases:
>100_bases ATCGGCTTGTGATCAAATACACTTATTTATTTAGCTGTTCTTGACGCATTACGCTAGCTCGTTATGTTGACGCCACATCA CTTTTGAGCAGGATGAGATC
Downstream 100 bases:
>100_bases ATAATCCTCAATCTAATAATGAGCCTCGCATTACGCGAGGCTCATTGGCAACCATGTTAAATGGGGGAGATCGCTTTTCG ATCTTCTGCTTCAACCACTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 95; Mature: 95
Protein sequence:
>95_residues MDTQQLINAITPEAYQRLLYAVETGKWPEGTPLSQQQRDSCMQAVMLYQSKHNTQADHMSVGVGGEVVFKSKAELKKRFS EGEEDILRVNPNQEA
Sequences:
>Translated_95_residues MDTQQLINAITPEAYQRLLYAVETGKWPEGTPLSQQQRDSCMQAVMLYQSKHNTQADHMSVGVGGEVVFKSKAELKKRFS EGEEDILRVNPNQEA >Mature_95_residues MDTQQLINAITPEAYQRLLYAVETGKWPEGTPLSQQQRDSCMQAVMLYQSKHNTQADHMSVGVGGEVVFKSKAELKKRFS EGEEDILRVNPNQEA
Specific function: Unknown
COG id: COG3139
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87081972, Length=79, Percent_Identity=48.1012658227848, Blast_Score=95, Evalue=7e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009749 [H]
Pfam domain/function: PF07023 DUF1315 [H]
EC number: NA
Molecular weight: Translated: 10726; Mature: 10726
Theoretical pI: Translated: 5.10; Mature: 5.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDTQQLINAITPEAYQRLLYAVETGKWPEGTPLSQQQRDSCMQAVMLYQSKHNTQADHMS CCHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEE VGVGGEVVFKSKAELKKRFSEGEEDILRVNPNQEA CCCCCCEEECCHHHHHHHHCCCCCCEEECCCCCCC >Mature Secondary Structure MDTQQLINAITPEAYQRLLYAVETGKWPEGTPLSQQQRDSCMQAVMLYQSKHNTQADHMS CCHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEE VGVGGEVVFKSKAELKKRFSEGEEDILRVNPNQEA CCCCCCEEECCHHHHHHHHCCCCCCEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]