| Definition | Vibrio cholerae O395 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_009457 |
| Length | 3,024,069 |
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The map label for this gene is 147675361
Identifier: 147675361
GI number: 147675361
Start: 694457
End: 695071
Strand: Direct
Name: 147675361
Synonym: VC0395_A0656
Alternate gene names: NA
Gene position: 694457-695071 (Clockwise)
Preceding gene: 147673668
Following gene: 147675596
Centisome position: 22.96
GC content: 51.22
Gene sequence:
>615_bases ATGCAATCCACTAACCCACAAGCAGGCTTTCGCACTAACAACCTTGGTCACTTGGTGCCTGAGAGCCAAATCAAAGAGAT CGACAAACTGCGTGATGAAGTCGTGCTCGATATCGTTGCCAAAGCGAAAGCCACACAGCAGGCCATGGCCGCATTCAAAA GCGAAGCAATGGCACAGGTCGCCGACTTTGTAGACCTTTCCGCCGAAGAGTTTGATGTGAAGTACGGCGGCGTGAAGGGT AACGTCACCCTCGTCTCGTTCGATGGTAAGTACAAAATCCAGCGCAGCATTGGTGAGCATCGAATCTTTGATGAACGCAT TCAAGCGGCCAAAGCCAAGATTGACGAGTGCATTACGCGCTGGTCGGAAGGCTCAAGCGATCAAATCAAAGCCTTGGTTG AGCTTGCATTCCGCGTCAACAAACAAGGCCACATCGACGTTAACCAAGTGCTGAGCCTGCGCCAGCTCAACATCGATGAC AAAGACTGGATCGAAGCGATGGACGCCATTGCAGACTCCATCAAAGTGGTGGGTAAAACCCCTTACCTGCGCATCTATGA GCGCGATTCAAACGGCGGTTATAAACAGATCGCACTCGATATCGCCAAGCTCTAA
Upstream 100 bases:
>100_bases AACTGCGAAGACGAAACCATGGGACTGCTTGCAGAAGCAGTGAAAGACAAACTGTACCAAGACTTAAAACACGTATTTGA CAAAGCTAACGGAGTTCAAA
Downstream 100 bases:
>100_bases AGGTGCCGTATGGGGATTCTGCTCACAACCCAATACGGTGAAGTGGTACTGAGCCGCCATGCAGTGGATCGCTGGCGGCA AAGAACTGAGCGCAGTCTCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 204; Mature: 204
Protein sequence:
>204_residues MQSTNPQAGFRTNNLGHLVPESQIKEIDKLRDEVVLDIVAKAKATQQAMAAFKSEAMAQVADFVDLSAEEFDVKYGGVKG NVTLVSFDGKYKIQRSIGEHRIFDERIQAAKAKIDECITRWSEGSSDQIKALVELAFRVNKQGHIDVNQVLSLRQLNIDD KDWIEAMDAIADSIKVVGKTPYLRIYERDSNGGYKQIALDIAKL
Sequences:
>Translated_204_residues MQSTNPQAGFRTNNLGHLVPESQIKEIDKLRDEVVLDIVAKAKATQQAMAAFKSEAMAQVADFVDLSAEEFDVKYGGVKG NVTLVSFDGKYKIQRSIGEHRIFDERIQAAKAKIDECITRWSEGSSDQIKALVELAFRVNKQGHIDVNQVLSLRQLNIDD KDWIEAMDAIADSIKVVGKTPYLRIYERDSNGGYKQIALDIAKL >Mature_204_residues MQSTNPQAGFRTNNLGHLVPESQIKEIDKLRDEVVLDIVAKAKATQQAMAAFKSEAMAQVADFVDLSAEEFDVKYGGVKG NVTLVSFDGKYKIQRSIGEHRIFDERIQAAKAKIDECITRWSEGSSDQIKALVELAFRVNKQGHIDVNQVLSLRQLNIDD KDWIEAMDAIADSIKVVGKTPYLRIYERDSNGGYKQIALDIAKL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22801; Mature: 22801
Theoretical pI: Translated: 5.79; Mature: 5.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQSTNPQAGFRTNNLGHLVPESQIKEIDKLRDEVVLDIVAKAKATQQAMAAFKSEAMAQV CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ADFVDLSAEEFDVKYGGVKGNVTLVSFDGKYKIQRSIGEHRIFDERIQAAKAKIDECITR HHHHHCCHHHHEEEECCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WSEGSSDQIKALVELAFRVNKQGHIDVNQVLSLRQLNIDDKDWIEAMDAIADSIKVVGKT HCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCC PYLRIYERDSNGGYKQIALDIAKL CEEEEEEECCCCCHHHHHHHHHCC >Mature Secondary Structure MQSTNPQAGFRTNNLGHLVPESQIKEIDKLRDEVVLDIVAKAKATQQAMAAFKSEAMAQV CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ADFVDLSAEEFDVKYGGVKGNVTLVSFDGKYKIQRSIGEHRIFDERIQAAKAKIDECITR HHHHHCCHHHHEEEECCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WSEGSSDQIKALVELAFRVNKQGHIDVNQVLSLRQLNIDDKDWIEAMDAIADSIKVVGKT HCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCC PYLRIYERDSNGGYKQIALDIAKL CEEEEEEECCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA