| Definition | Vibrio cholerae O395 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_009457 |
| Length | 3,024,069 |
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The map label for this gene is 147675342
Identifier: 147675342
GI number: 147675342
Start: 748301
End: 749236
Strand: Reverse
Name: 147675342
Synonym: VC0395_A0722
Alternate gene names: NA
Gene position: 749236-748301 (Counterclockwise)
Preceding gene: 147673750
Following gene: 147675758
Centisome position: 24.78
GC content: 44.12
Gene sequence:
>936_bases TTGATCGTGTATTTTATGAGTCACCTATCTTTTTACTGGTTACCCGAAACCAAACATAAACTCATCCAAGGATTGGAAAG TGAATTTGCGCAATTGGTCGAGCTTTCTATCAGTACCGGGAAAATTTCGCTTCCCCCAATTCCAGATGTCGTTTTAAAAA TTCAGCGCCTGTGCTTAGCGGAATCGACATCCATATCCGATGTCGCGGACTGCTTAATTGAAGATCCTGGGCTCTCTGCG ATTGTGATTCGCGTGGCGAACTCAGTTGTGTTTAATCGTCGAAACATTACGTGCACCGATATTGTCACGGCCGTTTCACG TCTTGGCATTTTGCGCGTTCGTGATATTGTGACGGCGCAAGCTATTGAACAGTTGAAGTACTCCGTCAACCTCAGTAAAG AGTGCAATCGCATCTTACTTAAAAGTGCGACCATTTCTCGCGAAATGGGGGCCACCATGTTACTGGTGACCCAGACATTT AAGTGTGTGGATGCGAAGAAATACCAGTACCTTGAGCTAGAAAAGGCACTACTAGTCGGTTTGTTGGCGGATATCGGTAT CTTCTGTCTGGTCAATGAGTACCATTTATATCTACAAAATGGTAATTATCTGGATCCCACTATTGCACTGAAGATTTTCC AATCTCAGTGCTCACCAATCAGTCAATTGGTGTTACGTCACTGGGGATTTGATCATGACTTTTTGGAAGTCGCTTGCAAC ACTGAGCTGGTAACCGAGCGACAAGAAGTCACTTACCTCGATATTGCTCGTATTGCTCATCACTTACTGATGTTCAGAAA GAAAGATGATGCGATTGACGATCACAATGTCGAGATCAACTCTGAAGGCGCTGAAGTGCTCTACCAGCTCAGCAACTTAA GTGAAATGGAATTTAACAACAAGCTAAGTGATGTGATCAGTGCCAGTGGCATCTGA
Upstream 100 bases:
>100_bases ATCGCTCAATAGTTCAACGAAAAAACCAGCGTAATCGGTAAAATGCATGGAACCGTTTGCTTATTTAGTTTAGCGATAGT TAAAATGCTACCAACTTTGC
Downstream 100 bases:
>100_bases AGTACCACTGTGAGGATGTTATGCTGTCAGGGATGATCTTTGTTTTTGCACCACTCGTGGTGGGTTATCTATTCATTATT CGTAACCCATCTCATCTCCA
Product: hypothetical protein
Products: NA
Alternate protein names: Hdod Domain Family Protein
Number of amino acids: Translated: 311; Mature: 311
Protein sequence:
>311_residues MIVYFMSHLSFYWLPETKHKLIQGLESEFAQLVELSISTGKISLPPIPDVVLKIQRLCLAESTSISDVADCLIEDPGLSA IVIRVANSVVFNRRNITCTDIVTAVSRLGILRVRDIVTAQAIEQLKYSVNLSKECNRILLKSATISREMGATMLLVTQTF KCVDAKKYQYLELEKALLVGLLADIGIFCLVNEYHLYLQNGNYLDPTIALKIFQSQCSPISQLVLRHWGFDHDFLEVACN TELVTERQEVTYLDIARIAHHLLMFRKKDDAIDDHNVEINSEGAEVLYQLSNLSEMEFNNKLSDVISASGI
Sequences:
>Translated_311_residues MIVYFMSHLSFYWLPETKHKLIQGLESEFAQLVELSISTGKISLPPIPDVVLKIQRLCLAESTSISDVADCLIEDPGLSA IVIRVANSVVFNRRNITCTDIVTAVSRLGILRVRDIVTAQAIEQLKYSVNLSKECNRILLKSATISREMGATMLLVTQTF KCVDAKKYQYLELEKALLVGLLADIGIFCLVNEYHLYLQNGNYLDPTIALKIFQSQCSPISQLVLRHWGFDHDFLEVACN TELVTERQEVTYLDIARIAHHLLMFRKKDDAIDDHNVEINSEGAEVLYQLSNLSEMEFNNKLSDVISASGI >Mature_311_residues MIVYFMSHLSFYWLPETKHKLIQGLESEFAQLVELSISTGKISLPPIPDVVLKIQRLCLAESTSISDVADCLIEDPGLSA IVIRVANSVVFNRRNITCTDIVTAVSRLGILRVRDIVTAQAIEQLKYSVNLSKECNRILLKSATISREMGATMLLVTQTF KCVDAKKYQYLELEKALLVGLLADIGIFCLVNEYHLYLQNGNYLDPTIALKIFQSQCSPISQLVLRHWGFDHDFLEVACN TELVTERQEVTYLDIARIAHHLLMFRKKDDAIDDHNVEINSEGAEVLYQLSNLSEMEFNNKLSDVISASGI
Specific function: Unknown
COG id: COG1639
COG function: function code T; Predicted signal transduction protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35057; Mature: 35057
Theoretical pI: Translated: 5.20; Mature: 5.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIVYFMSHLSFYWLPETKHKLIQGLESEFAQLVELSISTGKISLPPIPDVVLKIQRLCLA CEEEEEECCEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHH ESTSISDVADCLIEDPGLSAIVIRVANSVVFNRRNITCTDIVTAVSRLGILRVRDIVTAQ CCCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH AIEQLKYSVNLSKECNRILLKSATISREMGATMLLVTQTFKCVDAKKYQYLELEKALLVG HHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCEEEEEEHHHHHHCCCCHHHHHHHHHHHHH LLADIGIFCLVNEYHLYLQNGNYLDPTIALKIFQSQCSPISQLVLRHWGFDHDFLEVACN HHHHHHHHEEEEEEEEEEECCCCCCHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHCC TELVTERQEVTYLDIARIAHHLLMFRKKDDAIDDHNVEINSEGAEVLYQLSNLSEMEFNN CHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCHHHHHHHHHCCHHHHHHH KLSDVISASGI HHHHHHHCCCC >Mature Secondary Structure MIVYFMSHLSFYWLPETKHKLIQGLESEFAQLVELSISTGKISLPPIPDVVLKIQRLCLA CEEEEEECCEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHH ESTSISDVADCLIEDPGLSAIVIRVANSVVFNRRNITCTDIVTAVSRLGILRVRDIVTAQ CCCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH AIEQLKYSVNLSKECNRILLKSATISREMGATMLLVTQTFKCVDAKKYQYLELEKALLVG HHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCEEEEEEHHHHHHCCCCHHHHHHHHHHHHH LLADIGIFCLVNEYHLYLQNGNYLDPTIALKIFQSQCSPISQLVLRHWGFDHDFLEVACN HHHHHHHHEEEEEEEEEEECCCCCCHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHCC TELVTERQEVTYLDIARIAHHLLMFRKKDDAIDDHNVEINSEGAEVLYQLSNLSEMEFNN CHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCHHHHHHHHHCCHHHHHHH KLSDVISASGI HHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA