| Definition | Vibrio cholerae O395 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_009457 |
| Length | 3,024,069 |
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The map label for this gene is 147675287
Identifier: 147675287
GI number: 147675287
Start: 717108
End: 718184
Strand: Direct
Name: 147675287
Synonym: VC0395_A0693
Alternate gene names: NA
Gene position: 717108-718184 (Clockwise)
Preceding gene: 147673122
Following gene: 147674662
Centisome position: 23.71
GC content: 52.0
Gene sequence:
>1077_bases GTGAGTGATGTTGTCACCCTCCGCGCAGGCGGCAATCTGTATCAAGGTTGGACAAAAATCAGCGTGACTCGCTCGCTTGA AGCGATGTCAGGCGCGTTTGATTTGGAGCTGACTCACAAGTGGCAAGGTTCATCCGATCGTTACCGCGCTTTCATGGAAC CAATCCAACAAGGCGCGGAATGCATTGTTGAGATTGGAGGAGACCGAGTGATCACCGGTTATGTGGATGACTGGGTTCCA AGCTATGACGATAAGCAAGTGATTATTTCTGTCTCTGGTCGAGATAAAACCTCAGACTTGATCGATTGCTCAATCGTCTA TCCTTCAGGTCAATTCGCCAATCAGGACTTGACGCAAATTGCGCGCACCGTTTGTCAGCCATTCGGTATCAAAGTCATCG TTAATACGGATGTTGGCGCGCCATTCCAGCGCATTCAAATTGAGCAAGGTGAAACGCCTTATGAGCTGCTGAGCCGCTTA GCGCGTCAGCGTGGTGTGCTACTCACCAGTGATGCGTTCGGCAACCTTGTGATCACTCGCGCAAGCAAACAGCGTGCTGG CTTCTCTTTGGTGCTTGGTCAAAACGTCAAAGCAGCGCGTGGCCGTTTTAGTTGGCGTAACCGTTACAGCAACTTCATTG TCAAGGCATCAGGCGCAGCGTTCGGCCAGTGGGATTCCTCTCCAGCGCAAAGCGTGGGCGGCATAAAAGCCGAAGTCAAA GACGTAGAGATTGGCCGCTATCGCCCGATGATTATCGTCAATGAAGAGATCACCACCGCCGAAGGTGCAGCGCGCCGTGG TCAATGGGAACGTCAGCGCAGCGTTGGCCGTTCTAATACAGCGGAATACACCGTGGTGGGTTGGCGAGTGCCAGAGACAG GTAAAGTATTCGATTTTAATCAAATCGTACCCGTGCGCGATGATATTCTGGGATTGGATGAAGACATGCTGATCAACACC ATCATGTTCAGTGAAGATGACGGTGGCCGCGCGGCAGTGATTGGCGTGGTTCGCCCAGATGCATTGGATATTCCACCGCA AATCGAGAAAGAAAGCTCAGTAGGAGGTTCGTGGTGA
Upstream 100 bases:
>100_bases CGTGAAGCAGGCGATACCGAATACCGCAATGCCATCGTGCGCCGTAATGGCTTTGCCAATCCGGCCTTTATTTTGCCAAG CCAAAACGTGGAGGTGATCA
Downstream 100 bases:
>100_bases ACGAGTTGGCTAAACGTTATATAGATAAGATGATGATGCCGCTTCGCCGCCGCATTTATTCTATGGTAGGCCGTGCCCTA GTAACGGGAATTGTTGAGGG
Product: bacteriophage Mu P protein
Products: NA
Alternate protein names: Phage Tail Protein; Mu P Family Protein; Bacteriophage Tail Protein; Bacteriophage Mu P Protein; Bacteriophage Mu P; Mu-Like Prophage Tail Protein; Bacteriophage Mu P Family Protein; Mu-Like Prophage Tail Protein GpP; Bacteriophage Related Protein; Prophage; Mu-Like Phage Tail Protein GpP; Bacteriophage V Tail Protein; Mu-Like Phage P Protein; Bacteriophage Tail Protein GpP Mu-Like; Phage Baseplate Protein
Number of amino acids: Translated: 358; Mature: 357
Protein sequence:
>358_residues MSDVVTLRAGGNLYQGWTKISVTRSLEAMSGAFDLELTHKWQGSSDRYRAFMEPIQQGAECIVEIGGDRVITGYVDDWVP SYDDKQVIISVSGRDKTSDLIDCSIVYPSGQFANQDLTQIARTVCQPFGIKVIVNTDVGAPFQRIQIEQGETPYELLSRL ARQRGVLLTSDAFGNLVITRASKQRAGFSLVLGQNVKAARGRFSWRNRYSNFIVKASGAAFGQWDSSPAQSVGGIKAEVK DVEIGRYRPMIIVNEEITTAEGAARRGQWERQRSVGRSNTAEYTVVGWRVPETGKVFDFNQIVPVRDDILGLDEDMLINT IMFSEDDGGRAAVIGVVRPDALDIPPQIEKESSVGGSW
Sequences:
>Translated_358_residues MSDVVTLRAGGNLYQGWTKISVTRSLEAMSGAFDLELTHKWQGSSDRYRAFMEPIQQGAECIVEIGGDRVITGYVDDWVP SYDDKQVIISVSGRDKTSDLIDCSIVYPSGQFANQDLTQIARTVCQPFGIKVIVNTDVGAPFQRIQIEQGETPYELLSRL ARQRGVLLTSDAFGNLVITRASKQRAGFSLVLGQNVKAARGRFSWRNRYSNFIVKASGAAFGQWDSSPAQSVGGIKAEVK DVEIGRYRPMIIVNEEITTAEGAARRGQWERQRSVGRSNTAEYTVVGWRVPETGKVFDFNQIVPVRDDILGLDEDMLINT IMFSEDDGGRAAVIGVVRPDALDIPPQIEKESSVGGSW >Mature_357_residues SDVVTLRAGGNLYQGWTKISVTRSLEAMSGAFDLELTHKWQGSSDRYRAFMEPIQQGAECIVEIGGDRVITGYVDDWVPS YDDKQVIISVSGRDKTSDLIDCSIVYPSGQFANQDLTQIARTVCQPFGIKVIVNTDVGAPFQRIQIEQGETPYELLSRLA RQRGVLLTSDAFGNLVITRASKQRAGFSLVLGQNVKAARGRFSWRNRYSNFIVKASGAAFGQWDSSPAQSVGGIKAEVKD VEIGRYRPMIIVNEEITTAEGAARRGQWERQRSVGRSNTAEYTVVGWRVPETGKVFDFNQIVPVRDDILGLDEDMLINTI MFSEDDGGRAAVIGVVRPDALDIPPQIEKESSVGGSW
Specific function: Unknown
COG id: COG4379
COG function: function code R; Mu-like prophage tail protein gpP
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39495; Mature: 39364
Theoretical pI: Translated: 5.01; Mature: 5.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDVVTLRAGGNLYQGWTKISVTRSLEAMSGAFDLELTHKWQGSSDRYRAFMEPIQQGAE CCCEEEEECCCCEECCEEEEEEEHHHHHHCCEEEEEEEECCCCCCHHHHHHHHHHHHCCC CIVEIGGDRVITGYVDDWVPSYDDKQVIISVSGRDKTSDLIDCSIVYPSGQFANQDLTQI EEEEECCCEEEEEEHHCCCCCCCCCEEEEEECCCCCCCCEEEEEEECCCCCCCCCHHHHH ARTVCQPFGIKVIVNTDVGAPFQRIQIEQGETPYELLSRLARQRGVLLTSDAFGNLVITR HHHHCCCCCEEEEEECCCCCCHHEEEEECCCCHHHHHHHHHHHCCEEEEECCCCCEEEEE ASKQRAGFSLVLGQNVKAARGRFSWRNRYSNFIVKASGAAFGQWDSSPAQSVGGIKAEVK CCCCCCCEEEEECCCCHHHHCCCHHHHHCCCEEEEECCCCCCCCCCCHHHHHCCCEEEEE DVEIGRYRPMIIVNEEITTAEGAARRGQWERQRSVGRSNTAEYTVVGWRVPETGKVFDFN EEECCCCCCEEEECCCCCCCCCHHHCCCHHHHHHCCCCCCCEEEEEEEECCCCCCEEECC QIVPVRDDILGLDEDMLINTIMFSEDDGGRAAVIGVVRPDALDIPPQIEKESSVGGSW CCCCCCHHHCCCCHHHEEEEEEEECCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SDVVTLRAGGNLYQGWTKISVTRSLEAMSGAFDLELTHKWQGSSDRYRAFMEPIQQGAE CCEEEEECCCCEECCEEEEEEEHHHHHHCCEEEEEEEECCCCCCHHHHHHHHHHHHCCC CIVEIGGDRVITGYVDDWVPSYDDKQVIISVSGRDKTSDLIDCSIVYPSGQFANQDLTQI EEEEECCCEEEEEEHHCCCCCCCCCEEEEEECCCCCCCCEEEEEEECCCCCCCCCHHHHH ARTVCQPFGIKVIVNTDVGAPFQRIQIEQGETPYELLSRLARQRGVLLTSDAFGNLVITR HHHHCCCCCEEEEEECCCCCCHHEEEEECCCCHHHHHHHHHHHCCEEEEECCCCCEEEEE ASKQRAGFSLVLGQNVKAARGRFSWRNRYSNFIVKASGAAFGQWDSSPAQSVGGIKAEVK CCCCCCCEEEEECCCCHHHHCCCHHHHHCCCEEEEECCCCCCCCCCCHHHHHCCCEEEEE DVEIGRYRPMIIVNEEITTAEGAARRGQWERQRSVGRSNTAEYTVVGWRVPETGKVFDFN EEECCCCCCEEEECCCCCCCCCHHHCCCHHHHHHCCCCCCCEEEEEEEECCCCCCEEECC QIVPVRDDILGLDEDMLINTIMFSEDDGGRAAVIGVVRPDALDIPPQIEKESSVGGSW CCCCCCHHHCCCCHHHEEEEEEEECCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA