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The map label for this gene is yfiO [C]

Identifier: 147675286

GI number: 147675286

Start: 247747

End: 248508

Strand: Reverse

Name: yfiO [C]

Synonym: VC0395_A0237

Alternate gene names: 147675286

Gene position: 248508-247747 (Counterclockwise)

Preceding gene: 147673050

Following gene: 147675178

Centisome position: 8.22

GC content: 48.03

Gene sequence:

>762_bases
TTGAAAAGCAAGATTTGCAAGGAACTCCACCCTGACATGAAATACCAGACTTTATCAGGCCTACTCGCGTTATCCCTGTT
ATTTGGTTGCTCTAGCAGCCCAGATGTGGTGCCAGATGTACCGCCATCACAGCTGTACTCTGAAGCGCAAACCGCTCTAC
AAAGCGGAACGTGGTTAACCGCTATCGAAAAACTAGAGGCGCTCGATTCACGCTATCCATTTGGTGCTTATTCAGAGCAA
GTACAGCTCGATCTGATTTATGCCTACTACAAAAATGATGATTTGGCCCTTGGCCTCGCGACCATCGAACGTTTTACACG
CCTTAATCCAACCCATGAAAAAATGGATTGGGTACTCTACATGCGCGGTTTGACGCACATGGCGCAAGATCGCAACTTCA
TGCATGACTTGTTTAATATCGATCGCCGTGACCGCGATCCTGAACCCGTGAAAGCAGCCTTTGCGGATTTTAAGAAGCTG
CTCCAGCGTTACCCAAACAGCCCATACGCAGAAGATGCGCAGCGTCGAATGTTTGCGCTCAAGAACCGTTTAGCGGAATA
CGATTTAGCGACCGCAGATTTCTACCTGCGCCGTGAAGCATGGATTGCGGCGATTAATCGCACTCAAGAGTTACAAAAAA
CCTATCCAGATACCGAAGCGGCACGTCAATCCTTAGAAATCCAACTCGAGGCTTATCAGCAGCTTGGTTTAACCGACGCG
GTAGAGCGAACTAAGCAGTTAATGCAGCTTAACCCTTTATAA

Upstream 100 bases:

>100_bases
CCGTGAGACTAATAGTCACTAGTATGGAAAAATACGCCGACATTGTATCTGTTACTGCCAAGAAAGTAACGAAACGATTT
GCGCGCGGTTTACGCACCTA

Downstream 100 bases:

>100_bases
GGCGCTAAAACTCACCAACAAAAAGAGCCACAGCAATTGTGGCTCTTTTTGTTTTGATTTTTATTGATTTGGCGTAGCGA
TGTTTCTCTTACACGCCCCA

Product: putative lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 253; Mature: 253

Protein sequence:

>253_residues
MKSKICKELHPDMKYQTLSGLLALSLLFGCSSSPDVVPDVPPSQLYSEAQTALQSGTWLTAIEKLEALDSRYPFGAYSEQ
VQLDLIYAYYKNDDLALGLATIERFTRLNPTHEKMDWVLYMRGLTHMAQDRNFMHDLFNIDRRDRDPEPVKAAFADFKKL
LQRYPNSPYAEDAQRRMFALKNRLAEYDLATADFYLRREAWIAAINRTQELQKTYPDTEAARQSLEIQLEAYQQLGLTDA
VERTKQLMQLNPL

Sequences:

>Translated_253_residues
MKSKICKELHPDMKYQTLSGLLALSLLFGCSSSPDVVPDVPPSQLYSEAQTALQSGTWLTAIEKLEALDSRYPFGAYSEQ
VQLDLIYAYYKNDDLALGLATIERFTRLNPTHEKMDWVLYMRGLTHMAQDRNFMHDLFNIDRRDRDPEPVKAAFADFKKL
LQRYPNSPYAEDAQRRMFALKNRLAEYDLATADFYLRREAWIAAINRTQELQKTYPDTEAARQSLEIQLEAYQQLGLTDA
VERTKQLMQLNPL
>Mature_253_residues
MKSKICKELHPDMKYQTLSGLLALSLLFGCSSSPDVVPDVPPSQLYSEAQTALQSGTWLTAIEKLEALDSRYPFGAYSEQ
VQLDLIYAYYKNDDLALGLATIERFTRLNPTHEKMDWVLYMRGLTHMAQDRNFMHDLFNIDRRDRDPEPVKAAFADFKKL
LQRYPNSPYAEDAQRRMFALKNRLAEYDLATADFYLRREAWIAAINRTQELQKTYPDTEAARQSLEIQLEAYQQLGLTDA
VERTKQLMQLNPL

Specific function: Unknown

COG id: COG4105

COG function: function code R; DNA uptake lipoprotein

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0169 (ComL) family [H]

Homologues:

Organism=Escherichia coli, GI1788947, Length=239, Percent_Identity=50.6276150627615, Blast_Score=258, Evalue=2e-70,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017689
- InterPro:   IPR011990 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29273; Mature: 29273

Theoretical pI: Translated: 5.42; Mature: 5.42

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSKICKELHPDMKYQTLSGLLALSLLFGCSSSPDVVPDVPPSQLYSEAQTALQSGTWLT
CCCHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHH
AIEKLEALDSRYPFGAYSEQVQLDLIYAYYKNDDLALGLATIERFTRLNPTHEKMDWVLY
HHHHHHHHHCCCCCCCCCCHHEEEEEEEEECCCCHHHHHHHHHHHHHCCCCHHHHHHHHH
MRGLTHMAQDRNFMHDLFNIDRRDRDPEPVKAAFADFKKLLQRYPNSPYAEDAQRRMFAL
HHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
KNRLAEYDLATADFYLRREAWIAAINRTQELQKTYPDTEAARQSLEIQLEAYQQLGLTDA
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHH
VERTKQLMQLNPL
HHHHHHHHHCCCC
>Mature Secondary Structure
MKSKICKELHPDMKYQTLSGLLALSLLFGCSSSPDVVPDVPPSQLYSEAQTALQSGTWLT
CCCHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHH
AIEKLEALDSRYPFGAYSEQVQLDLIYAYYKNDDLALGLATIERFTRLNPTHEKMDWVLY
HHHHHHHHHCCCCCCCCCCHHEEEEEEEEECCCCHHHHHHHHHHHHHCCCCHHHHHHHHH
MRGLTHMAQDRNFMHDLFNIDRRDRDPEPVKAAFADFKKLLQRYPNSPYAEDAQRRMFAL
HHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
KNRLAEYDLATADFYLRREAWIAAINRTQELQKTYPDTEAARQSLEIQLEAYQQLGLTDA
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHH
VERTKQLMQLNPL
HHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10952301 [H]