| Definition | Vibrio cholerae O395 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_009457 |
| Length | 3,024,069 |
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The map label for this gene is 147675101
Identifier: 147675101
GI number: 147675101
Start: 537000
End: 537293
Strand: Reverse
Name: 147675101
Synonym: VC0395_A0503
Alternate gene names: NA
Gene position: 537293-537000 (Counterclockwise)
Preceding gene: 147673605
Following gene: 147674184
Centisome position: 17.77
GC content: 49.66
Gene sequence:
>294_bases ATGAACAAAGCCCAAATCGAGATTTATTACTGCCGCCAATGCAATTGGATGCTGCGGTCTGCCTGGCTGAGTCAGGAGCT ACTGCATACCTTCAGCGAAGAGATTGAGTATGTCGCCCTGCACCCCGATACGGGCGGACGCTTCGAGATTTTTTGTAATG GCGTGCAGATTTGGGAACGTAAACAGGAAGGGGGATTTCCAGAAGCCAAAGTGCTGAAGCAAAGAGTGCGTGATTTAATT GATCCTGAGCGCGATCTTGGGCATGTTGATCGCCCCTCTTCTACGCAAAGTTAA
Upstream 100 bases:
>100_bases AGAACCATTCTCTTTACCAGCTTAAGTCATGGTTCTACCGTACTGTTCAGTAATTCTTAACCTGACTGAGCGTAGAATAG GACATAACAAGGACGTCACG
Downstream 100 bases:
>100_bases GCGATCCCCAAACGACTCAGAATAAAATACGGCCAACACCGCTGCAGCTTCAAGTCGCAAGGGGATGTCGAACTTTAGAT TTATTGAAGGAGGCAACTGG
Product: hypothetical protein
Products: NA
Alternate protein names: SelT/SelW/SelH Selenoprotein; SelT/SelW/SelH; SelT/SelW/SelH Selenoprotein Domain; Selenoprotein W-Related Protein; Selenoprotein W-Related Family; SelT/SelW/SelH Domain-Containing Protein; SelT/SelW/SelH Selenodomain-Containing Protein; Selenoprotein W-Related; SelT/SelW/SelH Domain
Number of amino acids: Translated: 97; Mature: 97
Protein sequence:
>97_residues MNKAQIEIYYCRQCNWMLRSAWLSQELLHTFSEEIEYVALHPDTGGRFEIFCNGVQIWERKQEGGFPEAKVLKQRVRDLI DPERDLGHVDRPSSTQS
Sequences:
>Translated_97_residues MNKAQIEIYYCRQCNWMLRSAWLSQELLHTFSEEIEYVALHPDTGGRFEIFCNGVQIWERKQEGGFPEAKVLKQRVRDLI DPERDLGHVDRPSSTQS >Mature_97_residues MNKAQIEIYYCRQCNWMLRSAWLSQELLHTFSEEIEYVALHPDTGGRFEIFCNGVQIWERKQEGGFPEAKVLKQRVRDLI DPERDLGHVDRPSSTQS
Specific function: Unknown
COG id: COG3526
COG function: function code O; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11427; Mature: 11427
Theoretical pI: Translated: 5.64; Mature: 5.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKAQIEIYYCRQCNWMLRSAWLSQELLHTFSEEIEYVALHPDTGGRFEIFCNGVQIWER CCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCEEEEEECCHHHHHH KQEGGFPEAKVLKQRVRDLIDPERDLGHVDRPSSTQS HCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MNKAQIEIYYCRQCNWMLRSAWLSQELLHTFSEEIEYVALHPDTGGRFEIFCNGVQIWER CCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCEEEEEECCHHHHHH KQEGGFPEAKVLKQRVRDLIDPERDLGHVDRPSSTQS HCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA