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The map label for this gene is ygiF [H]

Identifier: 147675057

GI number: 147675057

Start: 2171358

End: 2172875

Strand: Reverse

Name: ygiF [H]

Synonym: VC0395_A2018

Alternate gene names: 147675057

Gene position: 2172875-2171358 (Counterclockwise)

Preceding gene: 147675429

Following gene: 147675584

Centisome position: 71.85

GC content: 49.74

Gene sequence:

>1518_bases
ATGGAAACCGAGATAGAACTGAAGTTTTTTGTTTCTCCAGATTTTTCAACCATCTTACGCGCGAAGATTTCTGAAACCAA
AGTTCTTCAGCACAGCTGTCGGGAGTTAGGAAACACGTACTTTGATACCCCCGATAACTGGTTGCGTCAGCATGATATTG
GACTGCGCATCCGTCGTTTTGATGAGGTGTATATCCAGACGGTGAAAACCGCAGGTCGTGTGGTCGCCGGTCTACATCAG
CGTCCGGAGTTCAATGCCGAACATCACAGTAATGAGCCCGATCTTTCGTTGCATCCTGCCGATATCTGGCCGCAAGGAAA
AGAGCTGACTCAGCTACAAGCCGAACTCATGCCGCTCTTTTCGACCAACTTCACTCGTGAACAGTGGCTGATTAGCATGG
CTGATGGTAGCCAAGTGGAAGTCGCCTTTGATCAAGGTCTTGTGGTGGCGGGTGATCGCCAAGAGCCGATTTGTGAAGTG
GAGCTGGAACTTAAGTCTGGTCAAACCGATGCACTGTTTACCTTAGCGCGCCAGCTTTGTGAGCATGGCGGTATGCGCTT
AGGGAATCTTAGCAAAGCCGCTCGTGGCTATCGCCTCGCTGCCAATTATTCGGGCGATGAAATTCAACCCATGGCTTTGG
TCAGTGTCGATAAAAATGACACTGCCGAGTCTTGCTTTATCCGTGCACTGGAACATGCGCTGGCGCACTGGCATTACCAT
GAGCAAATCTATACCGAACGTGAAAACGTGGCGGCATTGCACGAAATTCGTCATGCAGTGAGTTACCTGCGCCAACTGCT
TTCCGTCTACGGCGGCATCATTCCGCGCCGCGCCAGCGCGATTTTGCGCCAAGAGCTCAAATGGTTAGAGCAAGAGTTAC
AGTGGCTAAAAGAGTTTGAATATCTGGAAAGTTTGCAAGAAGACAAGGGCTACGCGCTGCGTAAACTGGATGCGCGTAAG
TTTTTAGTCACCGCGTTGAAAACCTTGCAAGAAAGCTTGCCACAGCGTGAAGATACACTGCGTTTACTGAGCAGTGCCCG
TTATACCGGCTTGTTACTGGATCTAAGTCGTTGGGTGCTGACACGTGGTTGGCAGCCGTTTTTAGATGACAAAGCACGAG
AAAAAATGGCGCAGCCGCTGGAAGCGTTCTCCGTAAAACAACTTGACCGCACATGGGCGGAGTTGATGGAAGCTTTTCCA
CCGGGTAAAACCTTAACCGTACAAGAATACCTCGATCAGCAGTATCGCCTAATGCGTAACCTTTACACTGGGGTGAGTTT
TGCAAGTTTATACGATGCTGAAAACCGTCAGGCATTTCGGATGCCGTGGGCGGATTTGTTGCACGGTATTGATGATTTAT
TGCGCCTCAAACCATTAGAGCGTTTGGTGGATTTGCTACAAGGTGAAGAGCAAGATCAACTGAAACGTTGGCTGATTCGT
CAAGAGAACTCCATTTTGCATGCGATGGAGCAAAGCCGCACGATGGGTGTTGAAGCGCATCCGTATTGGCGTGAGTAG

Upstream 100 bases:

>100_bases
CAATAAAACTGTTTTAGATCATGATTGGGCCGATATTTCTCTCTTGCTCCGGTGTCTATAAGGCAATATCCTGTCGGCAT
CTGCATCGAAAGGGATAACT

Downstream 100 bases:

>100_bases
CTCTGGCTAACGCATTGATATCGATAAATAAGGGAGGCGGGGGCTTCCCTTTTCTTTTTATCGCTTTTCCCCATCTTGGT
GATCCTTCACTATGCATGCC

Product: hypothetical protein

Products: NA

Alternate protein names: ORFXE [H]

Number of amino acids: Translated: 505; Mature: 505

Protein sequence:

>505_residues
METEIELKFFVSPDFSTILRAKISETKVLQHSCRELGNTYFDTPDNWLRQHDIGLRIRRFDEVYIQTVKTAGRVVAGLHQ
RPEFNAEHHSNEPDLSLHPADIWPQGKELTQLQAELMPLFSTNFTREQWLISMADGSQVEVAFDQGLVVAGDRQEPICEV
ELELKSGQTDALFTLARQLCEHGGMRLGNLSKAARGYRLAANYSGDEIQPMALVSVDKNDTAESCFIRALEHALAHWHYH
EQIYTERENVAALHEIRHAVSYLRQLLSVYGGIIPRRASAILRQELKWLEQELQWLKEFEYLESLQEDKGYALRKLDARK
FLVTALKTLQESLPQREDTLRLLSSARYTGLLLDLSRWVLTRGWQPFLDDKAREKMAQPLEAFSVKQLDRTWAELMEAFP
PGKTLTVQEYLDQQYRLMRNLYTGVSFASLYDAENRQAFRMPWADLLHGIDDLLRLKPLERLVDLLQGEEQDQLKRWLIR
QENSILHAMEQSRTMGVEAHPYWRE

Sequences:

>Translated_505_residues
METEIELKFFVSPDFSTILRAKISETKVLQHSCRELGNTYFDTPDNWLRQHDIGLRIRRFDEVYIQTVKTAGRVVAGLHQ
RPEFNAEHHSNEPDLSLHPADIWPQGKELTQLQAELMPLFSTNFTREQWLISMADGSQVEVAFDQGLVVAGDRQEPICEV
ELELKSGQTDALFTLARQLCEHGGMRLGNLSKAARGYRLAANYSGDEIQPMALVSVDKNDTAESCFIRALEHALAHWHYH
EQIYTERENVAALHEIRHAVSYLRQLLSVYGGIIPRRASAILRQELKWLEQELQWLKEFEYLESLQEDKGYALRKLDARK
FLVTALKTLQESLPQREDTLRLLSSARYTGLLLDLSRWVLTRGWQPFLDDKAREKMAQPLEAFSVKQLDRTWAELMEAFP
PGKTLTVQEYLDQQYRLMRNLYTGVSFASLYDAENRQAFRMPWADLLHGIDDLLRLKPLERLVDLLQGEEQDQLKRWLIR
QENSILHAMEQSRTMGVEAHPYWRE
>Mature_505_residues
METEIELKFFVSPDFSTILRAKISETKVLQHSCRELGNTYFDTPDNWLRQHDIGLRIRRFDEVYIQTVKTAGRVVAGLHQ
RPEFNAEHHSNEPDLSLHPADIWPQGKELTQLQAELMPLFSTNFTREQWLISMADGSQVEVAFDQGLVVAGDRQEPICEV
ELELKSGQTDALFTLARQLCEHGGMRLGNLSKAARGYRLAANYSGDEIQPMALVSVDKNDTAESCFIRALEHALAHWHYH
EQIYTERENVAALHEIRHAVSYLRQLLSVYGGIIPRRASAILRQELKWLEQELQWLKEFEYLESLQEDKGYALRKLDARK
FLVTALKTLQESLPQREDTLRLLSSARYTGLLLDLSRWVLTRGWQPFLDDKAREKMAQPLEAFSVKQLDRTWAELMEAFP
PGKTLTVQEYLDQQYRLMRNLYTGVSFASLYDAENRQAFRMPWADLLHGIDDLLRLKPLERLVDLLQGEEQDQLKRWLIR
QENSILHAMEQSRTMGVEAHPYWRE

Specific function: Unknown

COG id: COG3025

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_1598 [H]

Homologues:

Organism=Escherichia coli, GI1789434, Length=480, Percent_Identity=37.5, Blast_Score=274, Evalue=9e-75,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008172
- InterPro:   IPR004206 [H]

Pfam domain/function: PF01928 CYTH [H]

EC number: NA

Molecular weight: Translated: 58707; Mature: 58707

Theoretical pI: Translated: 5.75; Mature: 5.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METEIELKFFVSPDFSTILRAKISETKVLQHSCRELGNTYFDTPDNWLRQHDIGLRIRRF
CCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCHHHHHH
DEVYIQTVKTAGRVVAGLHQRPEFNAEHHSNEPDLSLHPADIWPQGKELTQLQAELMPLF
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
STNFTREQWLISMADGSQVEVAFDQGLVVAGDRQEPICEVELELKSGQTDALFTLARQLC
CCCCCHHHHEEEECCCCEEEEEECCCEEEECCCCCCCEEEEEEECCCCHHHHHHHHHHHH
EHGGMRLGNLSKAARGYRLAANYSGDEIQPMALVSVDKNDTAESCFIRALEHALAHWHYH
HHCCCCCCCHHHHHCCCEEEECCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHH
EQIYTERENVAALHEIRHAVSYLRQLLSVYGGIIPRRASAILRQELKWLEQELQWLKEFE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
YLESLQEDKGYALRKLDARKFLVTALKTLQESLPQREDTLRLLSSARYTGLLLDLSRWVL
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
TRGWQPFLDDKAREKMAQPLEAFSVKQLDRTWAELMEAFPPGKTLTVQEYLDQQYRLMRN
HCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHH
LYTGVSFASLYDAENRQAFRMPWADLLHGIDDLLRLKPLERLVDLLQGEEQDQLKRWLIR
HHHCCHHHHHHCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
QENSILHAMEQSRTMGVEAHPYWRE
HCHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
METEIELKFFVSPDFSTILRAKISETKVLQHSCRELGNTYFDTPDNWLRQHDIGLRIRRF
CCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCHHHHHH
DEVYIQTVKTAGRVVAGLHQRPEFNAEHHSNEPDLSLHPADIWPQGKELTQLQAELMPLF
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
STNFTREQWLISMADGSQVEVAFDQGLVVAGDRQEPICEVELELKSGQTDALFTLARQLC
CCCCCHHHHEEEECCCCEEEEEECCCEEEECCCCCCCEEEEEEECCCCHHHHHHHHHHHH
EHGGMRLGNLSKAARGYRLAANYSGDEIQPMALVSVDKNDTAESCFIRALEHALAHWHYH
HHCCCCCCCHHHHHCCCEEEECCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHH
EQIYTERENVAALHEIRHAVSYLRQLLSVYGGIIPRRASAILRQELKWLEQELQWLKEFE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
YLESLQEDKGYALRKLDARKFLVTALKTLQESLPQREDTLRLLSSARYTGLLLDLSRWVL
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
TRGWQPFLDDKAREKMAQPLEAFSVKQLDRTWAELMEAFPPGKTLTVQEYLDQQYRLMRN
HCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHH
LYTGVSFASLYDAENRQAFRMPWADLLHGIDDLLRLKPLERLVDLLQGEEQDQLKRWLIR
HHHCCHHHHHHCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
QENSILHAMEQSRTMGVEAHPYWRE
HCHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8412694; 9278503 [H]