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The map label for this gene is alpA [C]

Identifier: 147675012

GI number: 147675012

Start: 1505734

End: 1505964

Strand: Reverse

Name: alpA [C]

Synonym: VC0395_A1406

Alternate gene names: 147675012

Gene position: 1505964-1505734 (Counterclockwise)

Preceding gene: 147673789

Following gene: 147673297

Centisome position: 49.8

GC content: 47.19

Gene sequence:

>231_bases
TTGCAACTAACCAACCTGAGAGGTGTGAATATGCCAGAGAACAACATTCGTTTGATCCGCTTTCGAGAAGTGCTAACTAT
GACTGGTTTGTCACGCTCTAGTTTGTACCGATTTATTGAAGAAAACCAATTCCCGCCCCAAGTTCAACTGGGTGGTCGTG
CTGTAGCTTGGGTAGAAGGCGAGGTGCAGGAGTGGATTGCTCAACGGATCACCAATCGTCGAATGGATTAG

Upstream 100 bases:

>100_bases
GAGTATGAGTACAACCTCTTGCTCTAACCGTATATACAACTCCAAGTGGTTGATAGGCAATTGCACTTAATCAAAAACTA
TTCAGACATATGTCATCTTC

Downstream 100 bases:

>100_bases
TGAAATCCATTTTAATAATCGTTAAAATATTAAATGATGTTTGATTGAAAAGTTCTCTTATTTTCTCTCTTAGTAAACCA
GCTCTCGTTAACGAGAGCTG

Product: putative transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator

Number of amino acids: Translated: 76; Mature: 76

Protein sequence:

>76_residues
MQLTNLRGVNMPENNIRLIRFREVLTMTGLSRSSLYRFIEENQFPPQVQLGGRAVAWVEGEVQEWIAQRITNRRMD

Sequences:

>Translated_76_residues
MQLTNLRGVNMPENNIRLIRFREVLTMTGLSRSSLYRFIEENQFPPQVQLGGRAVAWVEGEVQEWIAQRITNRRMD
>Mature_76_residues
MQLTNLRGVNMPENNIRLIRFREVLTMTGLSRSSLYRFIEENQFPPQVQLGGRAVAWVEGEVQEWIAQRITNRRMD

Specific function: Positive Regulator Of The Expression Of The Slpa Gene. [C]

COG id: COG3311

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8963; Mature: 8963

Theoretical pI: Translated: 10.77; Mature: 10.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.3 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLTNLRGVNMPENNIRLIRFREVLTMTGLSRSSLYRFIEENQFPPQVQLGGRAVAWVEG
CCCCCCCCCCCCCCCEEEEEHHHHHHHCCCCHHHHHHHHHCCCCCCCEEECCEEEEEECC
EVQEWIAQRITNRRMD
HHHHHHHHHHHHCCCC
>Mature Secondary Structure
MQLTNLRGVNMPENNIRLIRFREVLTMTGLSRSSLYRFIEENQFPPQVQLGGRAVAWVEG
CCCCCCCCCCCCCCCEEEEEHHHHHHHCCCCHHHHHHHHHCCCCCCCEEECCEEEEEECC
EVQEWIAQRITNRRMD
HHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA