| Definition | Vibrio cholerae O395 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_009457 |
| Length | 3,024,069 |
Click here to switch to the map view.
The map label for this gene is 147674869
Identifier: 147674869
GI number: 147674869
Start: 693486
End: 693926
Strand: Direct
Name: 147674869
Synonym: VC0395_A0653
Alternate gene names: NA
Gene position: 693486-693926 (Clockwise)
Preceding gene: 147675492
Following gene: 147674255
Centisome position: 22.93
GC content: 47.17
Gene sequence:
>441_bases ATGAGCAATATCAAGAATGAGTACCAAGGGGCCAAAGGCCTGAGAGCTATCTCTGAGCTAACGGGGATCCCTAAGCCAAC TCTACATCAACGCATCTATCGGTTGGGTATGACGGTTGAAGAAGCGGTTAATCATCAGAAAGGCATTTATGTGAAAAAAA AGCAGCATGAATACCAAGGCATCGTTGGATTGGCTGCGATTTCTCGTCAATACGGAGTGCCGCTACGAACGCTTTATTCC CGAGTTATCAGCCAAGGAATGACAGTTGAAGAAGCGGTGAATAAGCCAATCAGAAGAGGGCTTAATCTCTTGGCGAAAAG GGCAGCACAGCCAAAGACTCAACCAGAGCCACAGGCAAGCGTGAAAGCAAGTAAGGCTGAATCGGTAAAGCCTGATCTGA TTAATCCACTTTGGAAGCTCGCGCTAGGCATATCAGCATAG
Upstream 100 bases:
>100_bases AGAAGCACTAGGTATTGAGCTGCTAATAGGTGTGCGCAAACCAGATTTACTGCACCCACTTTGGAAACTGGCGCTAGGCA TGGCGGCATAAGGAAACGTG
Downstream 100 bases:
>100_bases GACAACAACATGAACAAACATGAAACCTTACTCAAAGCGGTTGGCCGCTTGAACTTCCACCACTGCTTTGTGCTGCGCAC CAACAGCGTAACCAAAATGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 146; Mature: 145
Protein sequence:
>146_residues MSNIKNEYQGAKGLRAISELTGIPKPTLHQRIYRLGMTVEEAVNHQKGIYVKKKQHEYQGIVGLAAISRQYGVPLRTLYS RVISQGMTVEEAVNKPIRRGLNLLAKRAAQPKTQPEPQASVKASKAESVKPDLINPLWKLALGISA
Sequences:
>Translated_146_residues MSNIKNEYQGAKGLRAISELTGIPKPTLHQRIYRLGMTVEEAVNHQKGIYVKKKQHEYQGIVGLAAISRQYGVPLRTLYS RVISQGMTVEEAVNKPIRRGLNLLAKRAAQPKTQPEPQASVKASKAESVKPDLINPLWKLALGISA >Mature_145_residues SNIKNEYQGAKGLRAISELTGIPKPTLHQRIYRLGMTVEEAVNHQKGIYVKKKQHEYQGIVGLAAISRQYGVPLRTLYSR VISQGMTVEEAVNKPIRRGLNLLAKRAAQPKTQPEPQASVKASKAESVKPDLINPLWKLALGISA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16139; Mature: 16008
Theoretical pI: Translated: 10.78; Mature: 10.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNIKNEYQGAKGLRAISELTGIPKPTLHQRIYRLGMTVEEAVNHQKGIYVKKKQHEYQG CCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHCCCEECHHHHHHHH IVGLAAISRQYGVPLRTLYSRVISQGMTVEEAVNKPIRRGLNLLAKRAAQPKTQPEPQAS HHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHH VKASKAESVKPDLINPLWKLALGISA HHHHHHHCCCCHHHHHHHHHHHHCCC >Mature Secondary Structure SNIKNEYQGAKGLRAISELTGIPKPTLHQRIYRLGMTVEEAVNHQKGIYVKKKQHEYQG CCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHCCCEECHHHHHHHH IVGLAAISRQYGVPLRTLYSRVISQGMTVEEAVNKPIRRGLNLLAKRAAQPKTQPEPQAS HHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHH VKASKAESVKPDLINPLWKLALGISA HHHHHHHCCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA