| Definition | Vibrio cholerae O395 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_009457 |
| Length | 3,024,069 |
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The map label for this gene is gltT [H]
Identifier: 147674816
GI number: 147674816
Start: 765280
End: 766038
Strand: Reverse
Name: gltT [H]
Synonym: VC0395_A0737
Alternate gene names: 147674816
Gene position: 766038-765280 (Counterclockwise)
Preceding gene: 147675613
Following gene: 147673414
Centisome position: 25.33
GC content: 49.67
Gene sequence:
>759_bases GTGCTCATTTTTATAGTCTCGATTGCTCATTTCTCGCGGCTCGCTACAACCATTGTTGATGCCATGGTGTGGATGATCAA TAAAGTGATGCTGATTGCGCCGATTGGTGTATTTGGCTTAATGGCTGATGCCGTGGGTACTTTTGGTTTCAGCGCGCTGA TGGTGGTGTTTAAGCTGTTCGTCGTTTACGTAGCGGCGATTGCGATTTTTGGCTTTGTGGCTTACCCAGTCATGATCCAA CTGTTCAGCAAAACATCGGCGAAAAAGTTCATTCAAGCAATGAAAAAGCCACAAGCGGTTGCACTGTCTACGGCCTCTTC TATGGCGACACTGCCTGTCACTATGGATACGGTGAAAAACGATCTGGGTGTGCGCAACTCAACGGCTTCTTTCGTACTGC CTTTGGGCGCGACCATCAATATGTCAGGTAACGCGATCTACTACGGTCTGGTGGCTATCTTCTTTGCTCAGCTGTTTAAT ATTGACCTGAGCATGGGCGCTTACATTGCGATCATCGTGACGGCGACTTTAGGTGCGGTTGGTCAAGCGGGTGTTCCGGG GCCTTCATTCCTTGTGGTGGCGGTTCTGCTCTCTGCCGGTATTCCTATTGAAGGTCTACCACTGCTGTTTGCACTGGATC GTATCTTTGACATGATCCGTACTGCGCTCAACATTACCGGCGATGCGGCTTGTGCAGTGATTGTGGATTCGATGATCACT GAGGAAGCGGCGGCTGAGCTGGAAAAACGTGAAGCTTAA
Upstream 100 bases:
>100_bases ACTACCGACGAACAAGGTACACCATCAATTCGCGGTGAATCACGCCCTGTAAATCCGATTTAAATTTTGTTTAACCCTAA TGAAATGAGCACTATGGTTA
Downstream 100 bases:
>100_bases TCGCTGATCATTATCATTCATAAAAAAAGCCAGACATTAACTGTCTGGCTTTTTCTTTATTGAGTCACGGGCAAATTATC CCGCGAAGGAGATGGGTTCG
Product: proton/glutamate symporter
Products: L-aspartate [Cytoplasm]; Proton [Cytoplasm]; L-glutamate [Cytoplasm] [C]
Alternate protein names: Glutamate-aspartate carrier protein [H]
Number of amino acids: Translated: 252; Mature: 252
Protein sequence:
>252_residues MLIFIVSIAHFSRLATTIVDAMVWMINKVMLIAPIGVFGLMADAVGTFGFSALMVVFKLFVVYVAAIAIFGFVAYPVMIQ LFSKTSAKKFIQAMKKPQAVALSTASSMATLPVTMDTVKNDLGVRNSTASFVLPLGATINMSGNAIYYGLVAIFFAQLFN IDLSMGAYIAIIVTATLGAVGQAGVPGPSFLVVAVLLSAGIPIEGLPLLFALDRIFDMIRTALNITGDAACAVIVDSMIT EEAAAELEKREA
Sequences:
>Translated_252_residues MLIFIVSIAHFSRLATTIVDAMVWMINKVMLIAPIGVFGLMADAVGTFGFSALMVVFKLFVVYVAAIAIFGFVAYPVMIQ LFSKTSAKKFIQAMKKPQAVALSTASSMATLPVTMDTVKNDLGVRNSTASFVLPLGATINMSGNAIYYGLVAIFFAQLFN IDLSMGAYIAIIVTATLGAVGQAGVPGPSFLVVAVLLSAGIPIEGLPLLFALDRIFDMIRTALNITGDAACAVIVDSMIT EEAAAELEKREA >Mature_252_residues MLIFIVSIAHFSRLATTIVDAMVWMINKVMLIAPIGVFGLMADAVGTFGFSALMVVFKLFVVYVAAIAIFGFVAYPVMIQ LFSKTSAKKFIQAMKKPQAVALSTASSMATLPVTMDTVKNDLGVRNSTASFVLPLGATINMSGNAIYYGLVAIFFAQLFN IDLSMGAYIAIIVTATLGAVGQAGVPGPSFLVVAVLLSAGIPIEGLPLLFALDRIFDMIRTALNITGDAACAVIVDSMIT EEAAAELEKREA
Specific function: This carrier protein is part of the Na(+)-dependent, binding-protein-independent glutamate-aspartate transport system [H]
COG id: COG1301
COG function: function code C; Na+/H+-dicarboxylate symporters
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sodium:dicarboxylate (SDF) symporter (TC 2.A.23) family [H]
Homologues:
Organism=Homo sapiens, GI21314632, Length=250, Percent_Identity=32, Blast_Score=127, Evalue=1e-29, Organism=Homo sapiens, GI4827012, Length=244, Percent_Identity=33.1967213114754, Blast_Score=125, Evalue=5e-29, Organism=Homo sapiens, GI169790839, Length=239, Percent_Identity=33.4728033472803, Blast_Score=124, Evalue=9e-29, Organism=Homo sapiens, GI223468566, Length=241, Percent_Identity=32.3651452282158, Blast_Score=122, Evalue=2e-28, Organism=Homo sapiens, GI223468564, Length=241, Percent_Identity=32.3651452282158, Blast_Score=122, Evalue=2e-28, Organism=Homo sapiens, GI5032093, Length=241, Percent_Identity=32.3651452282158, Blast_Score=120, Evalue=1e-27, Organism=Homo sapiens, GI66773030, Length=235, Percent_Identity=34.0425531914894, Blast_Score=118, Evalue=5e-27, Organism=Homo sapiens, GI194239697, Length=187, Percent_Identity=35.8288770053476, Blast_Score=112, Evalue=2e-25, Organism=Homo sapiens, GI301601644, Length=151, Percent_Identity=39.7350993377483, Blast_Score=110, Evalue=9e-25, Organism=Homo sapiens, GI40254478, Length=143, Percent_Identity=41.958041958042, Blast_Score=109, Evalue=2e-24, Organism=Homo sapiens, GI262359914, Length=161, Percent_Identity=32.2981366459627, Blast_Score=80, Evalue=2e-15, Organism=Escherichia coli, GI1790514, Length=220, Percent_Identity=39.5454545454545, Blast_Score=133, Evalue=1e-32, Organism=Escherichia coli, GI1789947, Length=231, Percent_Identity=30.3030303030303, Blast_Score=110, Evalue=1e-25, Organism=Escherichia coli, GI1789473, Length=239, Percent_Identity=29.2887029288703, Blast_Score=80, Evalue=9e-17, Organism=Caenorhabditis elegans, GI193206654, Length=223, Percent_Identity=36.322869955157, Blast_Score=132, Evalue=2e-31, Organism=Caenorhabditis elegans, GI71983106, Length=214, Percent_Identity=35.0467289719626, Blast_Score=127, Evalue=4e-30, Organism=Caenorhabditis elegans, GI71983099, Length=210, Percent_Identity=35.7142857142857, Blast_Score=127, Evalue=5e-30, Organism=Caenorhabditis elegans, GI193206505, Length=229, Percent_Identity=32.3144104803493, Blast_Score=124, Evalue=5e-29, Organism=Caenorhabditis elegans, GI17537407, Length=235, Percent_Identity=31.9148936170213, Blast_Score=119, Evalue=2e-27, Organism=Caenorhabditis elegans, GI71996953, Length=221, Percent_Identity=30.7692307692308, Blast_Score=117, Evalue=6e-27, Organism=Caenorhabditis elegans, GI17541374, Length=238, Percent_Identity=34.453781512605, Blast_Score=116, Evalue=1e-26, Organism=Drosophila melanogaster, GI24583025, Length=241, Percent_Identity=29.8755186721992, Blast_Score=104, Evalue=6e-23, Organism=Drosophila melanogaster, GI17137668, Length=241, Percent_Identity=29.8755186721992, Blast_Score=104, Evalue=6e-23, Organism=Drosophila melanogaster, GI24583023, Length=241, Percent_Identity=29.8755186721992, Blast_Score=104, Evalue=6e-23, Organism=Drosophila melanogaster, GI281360481, Length=233, Percent_Identity=30.9012875536481, Blast_Score=77, Evalue=1e-14, Organism=Drosophila melanogaster, GI281360483, Length=233, Percent_Identity=30.9012875536481, Blast_Score=77, Evalue=1e-14, Organism=Drosophila melanogaster, GI17137666, Length=233, Percent_Identity=30.9012875536481, Blast_Score=77, Evalue=1e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001991 - InterPro: IPR018107 [H]
Pfam domain/function: PF00375 SDF [H]
EC number: NA
Molecular weight: Translated: 26633; Mature: 26633
Theoretical pI: Translated: 5.88; Mature: 5.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 5.6 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 5.6 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLIFIVSIAHFSRLATTIVDAMVWMINKVMLIAPIGVFGLMADAVGTFGFSALMVVFKLF CEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VVYVAAIAIFGFVAYPVMIQLFSKTSAKKFIQAMKKPQAVALSTASSMATLPVTMDTVKN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEHHHHHHHHCCCCHHHHHHH DLGVRNSTASFVLPLGATINMSGNAIYYGLVAIFFAQLFNIDLSMGAYIAIIVTATLGAV HCCCCCCCCCEEEECCCEEECCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHC GQAGVPGPSFLVVAVLLSAGIPIEGLPLLFALDRIFDMIRTALNITGDAACAVIVDSMIT CCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH EEAAAELEKREA HHHHHHHHHCCC >Mature Secondary Structure MLIFIVSIAHFSRLATTIVDAMVWMINKVMLIAPIGVFGLMADAVGTFGFSALMVVFKLF CEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VVYVAAIAIFGFVAYPVMIQLFSKTSAKKFIQAMKKPQAVALSTASSMATLPVTMDTVKN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEHHHHHHHHCCCCHHHHHHH DLGVRNSTASFVLPLGATINMSGNAIYYGLVAIFFAQLFNIDLSMGAYIAIIVTATLGAV HCCCCCCCCCEEEECCCEEECCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHC GQAGVPGPSFLVVAVLLSAGIPIEGLPLLFALDRIFDMIRTALNITGDAACAVIVDSMIT CCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH EEAAAELEKREA HHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: L-aspartate [Periplasm]; Proton [Periplasm]; L-glutamate [Periplasm] [C]
Specific reaction: Proton [Periplasm] + L-aspartate [Periplasm] = Proton [Cytoplasm] + L-aspartate [Cytoplasm] Proton [Periplasm] + L-glutamate [Periplasm] = Proton [Cytoplasm] + L-glutamate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 1359385 [H]