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The map label for this gene is cycA [H]

Identifier: 147674795

GI number: 147674795

Start: 2561198

End: 2561869

Strand: Reverse

Name: cycA [H]

Synonym: VC0395_A2406

Alternate gene names: 147674795

Gene position: 2561869-2561198 (Counterclockwise)

Preceding gene: 147673278

Following gene: 147675609

Centisome position: 84.72

GC content: 48.66

Gene sequence:

>672_bases
ATGAGAGGTACCTCAGAGTGGTACTGGAAGCTTGATAATTATAAATGGAATGTCATGAAGAAATTAGCGCTAATCTTGAG
TGTTTTAGCCAGCTGCTCTGTATGGGCCCAAGGTAGTATCGAAGCTGGTAAAGCCAAATCTCTAACCTGTGCTGCCTGCC
ACGGTGCAGACGGCAACAGCCCGTTAACCATTTACCCTAAACTGGCAGGGCAACATGAGAAGTATCTTGAGAAACAACTC
AAGGAACTGAAATTGGGTGCTTCCAGCGGCGGAAAACAGGGCCGTTATGATCCTGTGATGAGTGCAATGGCGATGCCACT
GAGCGATGAAGATATCGCTGACTTGGCAGCATACTATGCCTCTATGCCTATCTCTGGCAATACCACACCGGAAGATGTCG
TGGCCCAAGGTAAAGTACTTTATACCGCTGGGGATGCATCACGTGGGCTGACCGCTTGTATTGCGTGTCATGGTCCGCGC
GGTAATGGTACGGAGTTATCAGGCTTTCCAAAAATTTCAGGCCAGCATGCTGACTACATTAAAGCGCAGCTAGAAAAGTT
CCGTTCCGGCACTCGTGCGAACGATATGAACGAAATGATGCGTGATGTGGCACATAAGCTGACCGATGCGGATATCGATA
TCCTATCCAAATACGTAGGTGGCCTACACTAG

Upstream 100 bases:

>100_bases
CACTGTGTTAACTCCATCTCGACTTTGTGTAGTCGATTGATTACTTTTTTGTGAAATTGTGTAAAATAACCGTGCTCGGC
ATAAGGTCGCCTATTGTACC

Downstream 100 bases:

>100_bases
TTAGACAAAACGAGCAAAGATGACTAAACAGCCCTAGTGACCTTACTAGGGCTGTTGCTTTTTATGGCTTGCCCACCTCT
TTTGGGGTAACGCATCGAAC

Product: cytochrome c4

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 223; Mature: 223

Protein sequence:

>223_residues
MRGTSEWYWKLDNYKWNVMKKLALILSVLASCSVWAQGSIEAGKAKSLTCAACHGADGNSPLTIYPKLAGQHEKYLEKQL
KELKLGASSGGKQGRYDPVMSAMAMPLSDEDIADLAAYYASMPISGNTTPEDVVAQGKVLYTAGDASRGLTACIACHGPR
GNGTELSGFPKISGQHADYIKAQLEKFRSGTRANDMNEMMRDVAHKLTDADIDILSKYVGGLH

Sequences:

>Translated_223_residues
MRGTSEWYWKLDNYKWNVMKKLALILSVLASCSVWAQGSIEAGKAKSLTCAACHGADGNSPLTIYPKLAGQHEKYLEKQL
KELKLGASSGGKQGRYDPVMSAMAMPLSDEDIADLAAYYASMPISGNTTPEDVVAQGKVLYTAGDASRGLTACIACHGPR
GNGTELSGFPKISGQHADYIKAQLEKFRSGTRANDMNEMMRDVAHKLTDADIDILSKYVGGLH
>Mature_223_residues
MRGTSEWYWKLDNYKWNVMKKLALILSVLASCSVWAQGSIEAGKAKSLTCAACHGADGNSPLTIYPKLAGQHEKYLEKQL
KELKLGASSGGKQGRYDPVMSAMAMPLSDEDIADLAAYYASMPISGNTTPEDVVAQGKVLYTAGDASRGLTACIACHGPR
GNGTELSGFPKISGQHADYIKAQLEKFRSGTRANDMNEMMRDVAHKLTDADIDILSKYVGGLH

Specific function: Diheme, high potential cytochrome c believed to be an intermediate electron donor to terminal oxidation systems [H]

COG id: COG2863

COG function: function code C; Cytochrome c553

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009056
- InterPro:   IPR003088 [H]

Pfam domain/function: PF00034 Cytochrom_C [H]

EC number: NA

Molecular weight: Translated: 24066; Mature: 24066

Theoretical pI: Translated: 7.89; Mature: 7.89

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRGTSEWYWKLDNYKWNVMKKLALILSVLASCSVWAQGSIEAGKAKSLTCAACHGADGNS
CCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCCC
PLTIYPKLAGQHEKYLEKQLKELKLGASSGGKQGRYDPVMSAMAMPLSDEDIADLAAYYA
CEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHH
SMPISGNTTPEDVVAQGKVLYTAGDASRGLTACIACHGPRGNGTELSGFPKISGQHADYI
HCCCCCCCCHHHHHHCCEEEEEECCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCHHHHH
KAQLEKFRSGTRANDMNEMMRDVAHKLTDADIDILSKYVGGLH
HHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCC
>Mature Secondary Structure
MRGTSEWYWKLDNYKWNVMKKLALILSVLASCSVWAQGSIEAGKAKSLTCAACHGADGNS
CCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCCC
PLTIYPKLAGQHEKYLEKQLKELKLGASSGGKQGRYDPVMSAMAMPLSDEDIADLAAYYA
CEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHH
SMPISGNTTPEDVVAQGKVLYTAGDASRGLTACIACHGPRGNGTELSGFPKISGQHADYI
HCCCCCCCCHHHHHHCCEEEEEECCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCHHHHH
KAQLEKFRSGTRANDMNEMMRDVAHKLTDADIDILSKYVGGLH
HHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8026750; 9032080 [H]