| Definition | Vibrio cholerae O395 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_009457 |
| Length | 3,024,069 |
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The map label for this gene is thiE [H]
Identifier: 147674784
GI number: 147674784
Start: 2606027
End: 2607349
Strand: Reverse
Name: thiE [H]
Synonym: VC0395_A2451
Alternate gene names: 147674784
Gene position: 2607349-2606027 (Counterclockwise)
Preceding gene: 147675426
Following gene: 147674373
Centisome position: 86.22
GC content: 46.49
Gene sequence:
>1323_bases ATGGTACGTTTGGTTTTTCCACGTCACCTATCAGCCTTAATCGGTCACGTGCAATACGCACTGTTGCAAGCCAAGGAACA AGGGGTCGCTATTCAGCATATCCGTTTGGATGTGGGCTCTGAGGCTCAGTTTATTTTAGAGAAGAGTGAAGAGTCTTTGC GAATTGGCAGTAGTTTGTGCTCTCAAAAGGAGGGTTTTGAGCCTTGCGACTACTACCTAGACTATGTGTCTGAAAACCGA GTGTTACCCGAGGCAATGATGTGTAACGCTCGCTGCACGGTGACTGTAGGTCTTCATGATGAATATGGTTTTACGCTGGA TAAGTGGCAGTATGGGCATGCTGCAGAGCAACTTATTGTTTATCCATCAGAGAACCATCGATTAAATAGTAAGGTAAATC AGCATCTTGCTTGGGTTTTAGCTACGTTGACCTTAGATTTTTCGATTGGAGATGGTTTGTGCATTGCAAGAGCGGCAATC ACTCAAGGGGATAGCGTTTCACGTGAAACATGGCCAACGCAATTCGAGCGTTTCCCTGCAGTGCAATCTAACATTCGCTC TCTATCTACCCAAGTATTTCTAACCACCAGAGCATTTCCAACGATTGATAAAGCAAAATTTAATCTCTATCCCGTAGTGG ATGATGTGAATTGGATTGAGCATCTTCTGAAGCTCGGTGTTAGAACGGTTCAGCTGCGAATTAAAGATCCTAAGCAGGGT GATTTGGAAGCACAGATTATCCGAGCCATCGCGTTAGGTCGTGAATTCAACGCACAGGTTTTTATAAATGATCATTGGCA ATTAGCCATTAAGCATCAGGCTTATGGTGTGCACCTTGGTCAAGAGGATTTGACGAGTGCGAATTTAACCGAGCTATTAG ATGCAGGTATTCGATTGGGGCTTTCGACGCATGGTTATTATGAGTTACTGATAGCCGCAGGAATACAGCCTAGCTACATC GCCCTTGGGCACATTTTTCCCACGACCACTAAACAGATGCCATCAAAACCACAAGGGCTAGTGCGATTGGCCGCCTATCA GCGGTTGGTTAATCAAATGCCTCACCAAGGACAACATGGCATTCCAACGGTGGCGATTGGTGGTATTGATTGCAGAAACA TTCGCGATGTTCTCGATTGTGGCGTCACGGCGGTTGCAGTGGTGCGGGCTATTACCGAGTCACCGGATCCTAGCCTTGCA GTACAAGCGTTGAGTTCTGCTTTTGCCGATTTTGTAGATGCGGAGTACAAGTTGATGCCAGCCAGCGAGTCATGCGAGCC ACTCAGTTACTTGGCTATGGAGGTAGCGGATGCTCACAGATAA
Upstream 100 bases:
>100_bases ATCTATACAGCTGGCGATGCAAGATAAGTCTCGTGAGTTTTTAGCCTCAGGTGCTGAACTCTATCATCCTTTGGTGAAAG AGCCGATCGAGGAGTAAGTC
Downstream 100 bases:
>100_bases ACAGTTTCTTCGCTATCAAAGGCAGATCAGCCTTGCTGAGCTTGGAGAGGAAGGGCAGCAAAAACTGCTTAATTCACGTG TGTTGATAGTTGGCTGCGGG
Product: thiamine-phosphate pyrophosphorylase
Products: NA
Alternate protein names: TMP pyrophosphorylase; TMP-PPase; Thiamine-phosphate synthase [H]
Number of amino acids: Translated: 440; Mature: 440
Protein sequence:
>440_residues MVRLVFPRHLSALIGHVQYALLQAKEQGVAIQHIRLDVGSEAQFILEKSEESLRIGSSLCSQKEGFEPCDYYLDYVSENR VLPEAMMCNARCTVTVGLHDEYGFTLDKWQYGHAAEQLIVYPSENHRLNSKVNQHLAWVLATLTLDFSIGDGLCIARAAI TQGDSVSRETWPTQFERFPAVQSNIRSLSTQVFLTTRAFPTIDKAKFNLYPVVDDVNWIEHLLKLGVRTVQLRIKDPKQG DLEAQIIRAIALGREFNAQVFINDHWQLAIKHQAYGVHLGQEDLTSANLTELLDAGIRLGLSTHGYYELLIAAGIQPSYI ALGHIFPTTTKQMPSKPQGLVRLAAYQRLVNQMPHQGQHGIPTVAIGGIDCRNIRDVLDCGVTAVAVVRAITESPDPSLA VQALSSAFADFVDAEYKLMPASESCEPLSYLAMEVADAHR
Sequences:
>Translated_440_residues MVRLVFPRHLSALIGHVQYALLQAKEQGVAIQHIRLDVGSEAQFILEKSEESLRIGSSLCSQKEGFEPCDYYLDYVSENR VLPEAMMCNARCTVTVGLHDEYGFTLDKWQYGHAAEQLIVYPSENHRLNSKVNQHLAWVLATLTLDFSIGDGLCIARAAI TQGDSVSRETWPTQFERFPAVQSNIRSLSTQVFLTTRAFPTIDKAKFNLYPVVDDVNWIEHLLKLGVRTVQLRIKDPKQG DLEAQIIRAIALGREFNAQVFINDHWQLAIKHQAYGVHLGQEDLTSANLTELLDAGIRLGLSTHGYYELLIAAGIQPSYI ALGHIFPTTTKQMPSKPQGLVRLAAYQRLVNQMPHQGQHGIPTVAIGGIDCRNIRDVLDCGVTAVAVVRAITESPDPSLA VQALSSAFADFVDAEYKLMPASESCEPLSYLAMEVADAHR >Mature_440_residues MVRLVFPRHLSALIGHVQYALLQAKEQGVAIQHIRLDVGSEAQFILEKSEESLRIGSSLCSQKEGFEPCDYYLDYVSENR VLPEAMMCNARCTVTVGLHDEYGFTLDKWQYGHAAEQLIVYPSENHRLNSKVNQHLAWVLATLTLDFSIGDGLCIARAAI TQGDSVSRETWPTQFERFPAVQSNIRSLSTQVFLTTRAFPTIDKAKFNLYPVVDDVNWIEHLLKLGVRTVQLRIKDPKQG DLEAQIIRAIALGREFNAQVFINDHWQLAIKHQAYGVHLGQEDLTSANLTELLDAGIRLGLSTHGYYELLIAAGIQPSYI ALGHIFPTTTKQMPSKPQGLVRLAAYQRLVNQMPHQGQHGIPTVAIGGIDCRNIRDVLDCGVTAVAVVRAITESPDPSLA VQALSSAFADFVDAEYKLMPASESCEPLSYLAMEVADAHR
Specific function: Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP) [H]
COG id: COG0352
COG function: function code H; Thiamine monophosphate synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the TMP-PPase family [H]
Homologues:
Organism=Escherichia coli, GI1790426, Length=207, Percent_Identity=54.5893719806763, Blast_Score=213, Evalue=2e-56, Organism=Saccharomyces cerevisiae, GI6325042, Length=229, Percent_Identity=28.82096069869, Blast_Score=75, Evalue=2e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR022998 - InterPro: IPR003733 [H]
Pfam domain/function: PF02581 TMP-TENI [H]
EC number: =2.5.1.3 [H]
Molecular weight: Translated: 48877; Mature: 48877
Theoretical pI: Translated: 6.19; Mature: 6.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVRLVFPRHLSALIGHVQYALLQAKEQGVAIQHIRLDVGSEAQFILEKSEESLRIGSSLC CEEEECHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCHHHHHCCHHHHHHHHHHH SQKEGFEPCDYYLDYVSENRVLPEAMMCNARCTVTVGLHDEYGFTLDKWQYGHAAEQLIV HHCCCCCHHHHHHHHHHCCCCCCHHHHCCCEEEEEEEECCCCCCEECCCCCCCCCCEEEE YPSENHRLNSKVNQHLAWVLATLTLDFSIGDGLCIARAAITQGDSVSRETWPTQFERFPA ECCCCCCCHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHCCCCCCCCCCCCHHHHHCHH VQSNIRSLSTQVFLTTRAFPTIDKAKFNLYPVVDDVNWIEHLLKLGVRTVQLRIKDPKQG HHHHHHHHHEEEEEEECCCCCCCCCCEEEEEEECCCHHHHHHHHCCCEEEEEEECCCCCC DLEAQIIRAIALGREFNAQVFINDHWQLAIKHQAYGVHLGQEDLTSANLTELLDAGIRLG CHHHHHHHHHHHCCCCCCEEEEECCEEEEEEEEEEEEECCHHHCCCCHHHHHHHHHHHCC LSTHGYYELLIAAGIQPSYIALGHIFPTTTKQMPSKPQGLVRLAAYQRLVNQMPHQGQHG CCCCCHHEEHEECCCCCCEEEEECCCCCCHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCC IPTVAIGGIDCRNIRDVLDCGVTAVAVVRAITESPDPSLAVQALSSAFADFVDAEYKLMP CCEEEECCCCHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCEEEEC ASESCEPLSYLAMEVADAHR CCCCCCHHHHHHHHHHHCCC >Mature Secondary Structure MVRLVFPRHLSALIGHVQYALLQAKEQGVAIQHIRLDVGSEAQFILEKSEESLRIGSSLC CEEEECHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCHHHHHCCHHHHHHHHHHH SQKEGFEPCDYYLDYVSENRVLPEAMMCNARCTVTVGLHDEYGFTLDKWQYGHAAEQLIV HHCCCCCHHHHHHHHHHCCCCCCHHHHCCCEEEEEEEECCCCCCEECCCCCCCCCCEEEE YPSENHRLNSKVNQHLAWVLATLTLDFSIGDGLCIARAAITQGDSVSRETWPTQFERFPA ECCCCCCCHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHCCCCCCCCCCCCHHHHHCHH VQSNIRSLSTQVFLTTRAFPTIDKAKFNLYPVVDDVNWIEHLLKLGVRTVQLRIKDPKQG HHHHHHHHHEEEEEEECCCCCCCCCCEEEEEEECCCHHHHHHHHCCCEEEEEEECCCCCC DLEAQIIRAIALGREFNAQVFINDHWQLAIKHQAYGVHLGQEDLTSANLTELLDAGIRLG CHHHHHHHHHHHCCCCCCEEEEECCEEEEEEEEEEEEECCHHHCCCCHHHHHHHHHHHCC LSTHGYYELLIAAGIQPSYIALGHIFPTTTKQMPSKPQGLVRLAAYQRLVNQMPHQGQHG CCCCCHHEEHEECCCCCCEEEEECCCCCCHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCC IPTVAIGGIDCRNIRDVLDCGVTAVAVVRAITESPDPSLAVQALSSAFADFVDAEYKLMP CCEEEECCCCHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCEEEEC ASESCEPLSYLAMEVADAHR CCCCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA