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The map label for this gene is ycgN [C]

Identifier: 147674670

GI number: 147674670

Start: 617005

End: 617442

Strand: Direct

Name: ycgN [C]

Synonym: VC0395_A0576

Alternate gene names: 147674670

Gene position: 617005-617442 (Clockwise)

Preceding gene: 147673522

Following gene: 229259766

Centisome position: 20.4

GC content: 47.03

Gene sequence:

>438_bases
ATGAGTACACCCTTCTGGCAAAGCAAAACGTTAGACCAAATGACCGAAGCCGAGTGGGAATCGCTGTGCGATGGCTGTGG
TAAATGTTGTCTGCACAAACTCATGGACGAAGATACGGATGAAATCTACTACACCAATGTGGCGTGTAGCTGGCTCAATA
GCGACACCTGCTCTTGTAAAGATTACCCCAATCGTTTTAGCTCAGGTGAAGAGTGTTTAAAGCTCACTCGCGACAAGATT
GAAGAGTTTAACTGGCTGCCTGATACCTGCGCTTACCGTTTGCTTGGTAATGGTCAAACACTTCCAGAATGGCATCCTTT
GCTGACCGGCTCGAAAGACGCCATGCATGCCGCCGATGAAAGTGTGCGCGGTAAAATCGTTTATGAAGTGGATGTGATTG
ATTGGGAAGATCACATTGTGCTGATGAGTCGAGATTAA

Upstream 100 bases:

>100_bases
TAACAGAAAGCTTGATAGGATGCACTTGCGCTTTTCTTGCACTTTAGCGATGTAAAGAGTATAAATCGTCCCCCCGATAG
ATAAACCGTAAGACACTGCA

Downstream 100 bases:

>100_bases
GCGCTTTACTCATCGATGGTGATGTTAGAGAACAAAAACGCCTTGCTGCTTGCAAGGCGTTTGTCTTTGTGTGAAAGCGA
AAACTAAACCGCGTTATTTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 145; Mature: 144

Protein sequence:

>145_residues
MSTPFWQSKTLDQMTEAEWESLCDGCGKCCLHKLMDEDTDEIYYTNVACSWLNSDTCSCKDYPNRFSSGEECLKLTRDKI
EEFNWLPDTCAYRLLGNGQTLPEWHPLLTGSKDAMHAADESVRGKIVYEVDVIDWEDHIVLMSRD

Sequences:

>Translated_145_residues
MSTPFWQSKTLDQMTEAEWESLCDGCGKCCLHKLMDEDTDEIYYTNVACSWLNSDTCSCKDYPNRFSSGEECLKLTRDKI
EEFNWLPDTCAYRLLGNGQTLPEWHPLLTGSKDAMHAADESVRGKIVYEVDVIDWEDHIVLMSRD
>Mature_144_residues
STPFWQSKTLDQMTEAEWESLCDGCGKCCLHKLMDEDTDEIYYTNVACSWLNSDTCSCKDYPNRFSSGEECLKLTRDKIE
EFNWLPDTCAYRLLGNGQTLPEWHPLLTGSKDAMHAADESVRGKIVYEVDVIDWEDHIVLMSRD

Specific function: Unknown

COG id: COG2983

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0260 family

Homologues:

Organism=Escherichia coli, GI145693117, Length=138, Percent_Identity=66.6666666666667, Blast_Score=199, Evalue=4e-53,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1013_VIBCM (C3LTV5)

Other databases:

- EMBL:   CP001233
- RefSeq:   YP_002809782.1
- GeneID:   7772292
- GenomeReviews:   CP001233_GR
- KEGG:   vcm:VCM66_1013
- OMA:   TCQCSDY
- ProtClustDB:   PRK05170
- HAMAP:   MF_00676
- InterPro:   IPR008228
- InterPro:   IPR005358
- PIRSF:   PIRSF006173

Pfam domain/function: PF03692 UPF0153

EC number: NA

Molecular weight: Translated: 16717; Mature: 16586

Theoretical pI: Translated: 4.20; Mature: 4.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.2 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
9.7 %Cys+Met (Translated Protein)
6.2 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
9.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTPFWQSKTLDQMTEAEWESLCDGCGKCCLHKLMDEDTDEIYYTNVACSWLNSDTCSCK
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCCCCCCCC
DYPNRFSSGEECLKLTRDKIEEFNWLPDTCAYRLLGNGQTLPEWHPLLTGSKDAMHAADE
CCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHCCC
SVRGKIVYEVDVIDWEDHIVLMSRD
CCCCEEEEEEEEEECCCCEEEEECC
>Mature Secondary Structure 
STPFWQSKTLDQMTEAEWESLCDGCGKCCLHKLMDEDTDEIYYTNVACSWLNSDTCSCK
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCCCCCCCC
DYPNRFSSGEECLKLTRDKIEEFNWLPDTCAYRLLGNGQTLPEWHPLLTGSKDAMHAADE
CCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHCCC
SVRGKIVYEVDVIDWEDHIVLMSRD
CCCCEEEEEEEEEECCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA