| Definition | Vibrio cholerae O395 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_009457 |
| Length | 3,024,069 |
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The map label for this gene is murR [H]
Identifier: 147674553
GI number: 147674553
Start: 2738842
End: 2739690
Strand: Reverse
Name: murR [H]
Synonym: VC0395_A2584
Alternate gene names: 147674553
Gene position: 2739690-2738842 (Counterclockwise)
Preceding gene: 147675088
Following gene: 147674646
Centisome position: 90.6
GC content: 52.77
Gene sequence:
>849_bases ATGTCAGTTCTACAACGCATCGTCAGTCGCCGAACCCAACTTTCCGAGAGTGGCCGCCAAATTGGCGATTGGGTGATTGC GAATGCACCTCAGGCGGCAGCGATGACCAGCCAAGATTTGGCGGCATGGGCCAATGTGAGCCAATCGAGTATAGTCAAAT TCACCCAACGGCTTGGTTTTAAAGGCTACAGCGAATTTAAACTCGCCCTCACCGAAGAGCTGGGACGCAAACAAGTCATG GTCAACCAGCCTTTACACAGCAACATCTTGGCCGATGACCCCGTTGCCGTGATTGCCCAAAAACTGGTGCAAACCAAAAC CGAAGCGATGTTTCACACGACCAATGCCCTGCGTTTGGATGAGTTTAGTGAGGCGATCAGCTGGATTCAGCAAGCGGTGC GGGTACAGATCATCGGGATTGGTGGCTCAGCACTGGTCGCCAAAGATCTCGCATTTAAGCTGCTCAAGCTCGGTATTACC GCGCTCACGGAGCAAGATAGCCATGTGCAGATCGCGACCGCTCGCACCTTACATAGCCAAGATGTGCTGATTGCGATTTC ATTTTCGGGAGAAAAGCGCGAAATTCTGATTGCAGCGGAAGCGGCCAAACAGCAAGGTGCGAAAGTGATTGCCCTGACCA CACCGAACAAAAATCGCTTACGTGAGATAGCCGATCTGGCACTGGATACAATTGCCGATGAAACGCAGCACCGCAGCTCC GCGATTGCTTCACGAACTGCGCAAAACGTGCTGACCGACCTGATTTTTCTCACCCTCACTCAGCAGCGTGAAACGTCCGC GCGGCAGTTGATCGATGACATTTCTTCCGACATTCGCCAGATGCGTTGA
Upstream 100 bases:
>100_bases AAAATAACCACGCAACCATGAAGTCATTGATTGAGAAAGAGTGAAGTGTGGCGTGCATTATTCCCATTTTGGAATATTTT ATTCGCAAGGAGTGTGAAAA
Downstream 100 bases:
>100_bases GAGGCGAACGCCTCTCAACTTCGGGTTTAGCGTGCACGCTGACTGAGTAACAGCAGCAGGAAATAGCTGCCACCAATGAT TGCCACTAGCGTGCCTGCGG
Product: hypothetical protein
Products: NA
Alternate protein names: MurPQ operon repressor [H]
Number of amino acids: Translated: 282; Mature: 281
Protein sequence:
>282_residues MSVLQRIVSRRTQLSESGRQIGDWVIANAPQAAAMTSQDLAAWANVSQSSIVKFTQRLGFKGYSEFKLALTEELGRKQVM VNQPLHSNILADDPVAVIAQKLVQTKTEAMFHTTNALRLDEFSEAISWIQQAVRVQIIGIGGSALVAKDLAFKLLKLGIT ALTEQDSHVQIATARTLHSQDVLIAISFSGEKREILIAAEAAKQQGAKVIALTTPNKNRLREIADLALDTIADETQHRSS AIASRTAQNVLTDLIFLTLTQQRETSARQLIDDISSDIRQMR
Sequences:
>Translated_282_residues MSVLQRIVSRRTQLSESGRQIGDWVIANAPQAAAMTSQDLAAWANVSQSSIVKFTQRLGFKGYSEFKLALTEELGRKQVM VNQPLHSNILADDPVAVIAQKLVQTKTEAMFHTTNALRLDEFSEAISWIQQAVRVQIIGIGGSALVAKDLAFKLLKLGIT ALTEQDSHVQIATARTLHSQDVLIAISFSGEKREILIAAEAAKQQGAKVIALTTPNKNRLREIADLALDTIADETQHRSS AIASRTAQNVLTDLIFLTLTQQRETSARQLIDDISSDIRQMR >Mature_281_residues SVLQRIVSRRTQLSESGRQIGDWVIANAPQAAAMTSQDLAAWANVSQSSIVKFTQRLGFKGYSEFKLALTEELGRKQVMV NQPLHSNILADDPVAVIAQKLVQTKTEAMFHTTNALRLDEFSEAISWIQQAVRVQIIGIGGSALVAKDLAFKLLKLGITA LTEQDSHVQIATARTLHSQDVLIAISFSGEKREILIAAEAAKQQGAKVIALTTPNKNRLREIADLALDTIADETQHRSSA IASRTAQNVLTDLIFLTLTQQRETSARQLIDDISSDIRQMR
Specific function: Represses the expression of the murPQ operon involved in the uptake and degradation of N-acetylmuramic acid (MurNAc). Binds to two adjacent inverted repeats within the operator region. MurNAc 6-phosphate, the substrate of murQ, is the specific inducer tha
COG id: COG1737
COG function: function code K; Transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 SIS domain [H]
Homologues:
Organism=Escherichia coli, GI1788767, Length=274, Percent_Identity=40.8759124087591, Blast_Score=204, Evalue=4e-54, Organism=Escherichia coli, GI87082130, Length=262, Percent_Identity=38.5496183206107, Blast_Score=189, Evalue=1e-49, Organism=Escherichia coli, GI87082369, Length=252, Percent_Identity=25, Blast_Score=100, Evalue=1e-22, Organism=Escherichia coli, GI1788159, Length=282, Percent_Identity=25.531914893617, Blast_Score=100, Evalue=1e-22,
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022821 - InterPro: IPR000281 - InterPro: IPR001347 - InterPro: IPR011991 [H]
Pfam domain/function: PF01418 HTH_6; PF01380 SIS [H]
EC number: NA
Molecular weight: Translated: 30997; Mature: 30866
Theoretical pI: Translated: 9.63; Mature: 9.63
Prosite motif: PS51071 HTH_RPIR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVLQRIVSRRTQLSESGRQIGDWVIANAPQAAAMTSQDLAAWANVSQSSIVKFTQRLGF CHHHHHHHHHHHHHHHCCHHHHCEEECCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCC KGYSEFKLALTEELGRKQVMVNQPLHSNILADDPVAVIAQKLVQTKTEAMFHTTNALRLD CCCHHHHHHHHHHCCCCCEEECCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHH EFSEAISWIQQAVRVQIIGIGGSALVAKDLAFKLLKLGITALTEQDSHVQIATARTLHSQ HHHHHHHHHHHHHEEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHCCCC DVLIAISFSGEKREILIAAEAAKQQGAKVIALTTPNKNRLREIADLALDTIADETQHRSS CEEEEEEECCCCCEEEEEEHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHH AIASRTAQNVLTDLIFLTLTQQRETSARQLIDDISSDIRQMR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SVLQRIVSRRTQLSESGRQIGDWVIANAPQAAAMTSQDLAAWANVSQSSIVKFTQRLGF HHHHHHHHHHHHHHHCCHHHHCEEECCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCC KGYSEFKLALTEELGRKQVMVNQPLHSNILADDPVAVIAQKLVQTKTEAMFHTTNALRLD CCCHHHHHHHHHHCCCCCEEECCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHH EFSEAISWIQQAVRVQIIGIGGSALVAKDLAFKLLKLGITALTEQDSHVQIATARTLHSQ HHHHHHHHHHHHHEEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHCCCC DVLIAISFSGEKREILIAAEAAKQQGAKVIALTTPNKNRLREIADLALDTIADETQHRSS CEEEEEEECCCCCEEEEEEHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHH AIASRTAQNVLTDLIFLTLTQQRETSARQLIDDISSDIRQMR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA