| Definition | Vibrio cholerae O395 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_009457 |
| Length | 3,024,069 |
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The map label for this gene is exeA [H]
Identifier: 147674552
GI number: 147674552
Start: 2176803
End: 2178392
Strand: Reverse
Name: exeA [H]
Synonym: VC0395_A2023
Alternate gene names: 147674552
Gene position: 2178392-2176803 (Counterclockwise)
Preceding gene: 147675028
Following gene: 147675429
Centisome position: 72.04
GC content: 51.89
Gene sequence:
>1590_bases ATGTATCTGAACTTCTTTGGGTTTGACGAACTACCGTTTTCTATCGTCCCCAATGCGCGTTATCTCTACCTGAGTCAGCG TCATCAGGAAGCCATAGTACACCTGCAAGCCGGATTGGGCGATGGCGGCGGCTTTGCCATGCTCACCGGAGAAGTCGGGA CGGGAAAAACCACTGTCGCGCGAGCGATTCTGGCGAGTTTGCCGGGCAAAACGCGCGCGGGGATGATCCTCAACCCCACT TTTTCCGATTTGGAGCTATTGGAAGCGATTTGTGATGAATTTGAGGTCTGCTATCCGAAAAAAGCGACCTTAAAGAAACT TACGCAAGTACTGCATGAGTTTTTGTTGGCCGAGCACGCGCAAGGCATACAAGTGCTTTTGATGATTGATGAAGCGCAGC ATTTGGCACCGGATGTGTTGGAGCAGCTACGCCTGCTGACCAATTTGGAAACCGAGAGCCATAAACTGCTTAAAGTACTG CTGATTGGCCAGCCCGAGTTGCAAGAAAAACTGCGTTTGCCGCAGTTGCGCCAGCTCGCCCAGCGGATCACTGGGCGCTA CCATTTATTGCCATTGAATGAAGAGCAAACGGCCGACTACATCCGCTTTCGGATTGAGCAAGCCAGCGGTAACCCTGAGT TGTTTAATCGTAAAGCCTGTCAGTGGATTGCAGAGCAAACTCACGGTATTCCGCGCTTAATCAATCTGGTGTGTGATGCG GCGTTAAAGCAAGCGTATCAAGCGGGTGAACCAACGCTGAGCCTAGCGAGAATTAAGCTCGCCTGCCAAGAGGTGATGAG CTTTCAATCTTCTGTTTATCAAGTGGCCTCGGCCAAACCTCCTGTACCTAAGCTCTCTTATCTCTCCAGCGCATTGGGGG GGATAGCTCTGGCCGTCGTACTGACATGGCAGTTACCACCCCAGCTTGATCGGGTTATGCAACACTATTTTCCGTTACCT GAAGTGGTGCCGCCGACCGAACAGAGAGTTTTCCCGCAAGCGTTACGTAGTGCGTTACTCAACGCGACGAGCAGCGAGCA TGCCCTTGAAACTCTGTATGCGGTCTGGGGCTATCAAGCCTCGGTGCTGGAGCAGTTTTGCCAAACTCAAGCAGATGCGG TGCTTTGGTGTGAAGAGCAGACGGGCGATTGGTCAACGCTACAAACTTACGATTTGCCCGCTGTACTCACTTTAATGATG GATGATGTGCCCACTTACGCGGTGCTGTATCGCTTAACGGGCGATCAAGCGGAGCTGTTGGTGGGAGGCGAACGTTATCG TATTGCCCGCCAATGGCTAGAGCCGTTATGGAATGGGCAATTTTCGCTACTTTGGCAGGCCAGTTTTTCTCGAACATTAA AGCAGGGAATGCAGGGAGCCGATGTAGCCTTGCTCGAGAGCAAATTGGCGCAAGTGTTGGGCGAACCTGAACGCCCGCGT GAGCAATTTGATAAGGATTTGTCGCGTAAAGTCGAGTTATTCCAACGTTGGCAGAACATGCACGTTGATGGTATCGCAGG AAGACAAACCTTACGCCGCCTTGAGTTATTGACCCAACAGCAAGCGCCGAGTTTGAAGGAGGAAGGCTAA
Upstream 100 bases:
>100_bases ATTTGCATCGTAGAGTCTCAAAAAATTGCATCAATGACATTGGCTAATCTTAGTCAGCAATGATACGTTGCACCCACTGC GATGAATAGGGTCAACAAGC
Downstream 100 bases:
>100_bases TGTCAAAAGTGATGAATGCCTTGAAGCAGTCTCAACAAAAGTATCTGCAAGCTCAGCCTGTCAGTCGTCGCACTTATACC GAGCAAGAACCCACAGCGAT
Product: general secretion pathway protein A
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 529; Mature: 529
Protein sequence:
>529_residues MYLNFFGFDELPFSIVPNARYLYLSQRHQEAIVHLQAGLGDGGGFAMLTGEVGTGKTTVARAILASLPGKTRAGMILNPT FSDLELLEAICDEFEVCYPKKATLKKLTQVLHEFLLAEHAQGIQVLLMIDEAQHLAPDVLEQLRLLTNLETESHKLLKVL LIGQPELQEKLRLPQLRQLAQRITGRYHLLPLNEEQTADYIRFRIEQASGNPELFNRKACQWIAEQTHGIPRLINLVCDA ALKQAYQAGEPTLSLARIKLACQEVMSFQSSVYQVASAKPPVPKLSYLSSALGGIALAVVLTWQLPPQLDRVMQHYFPLP EVVPPTEQRVFPQALRSALLNATSSEHALETLYAVWGYQASVLEQFCQTQADAVLWCEEQTGDWSTLQTYDLPAVLTLMM DDVPTYAVLYRLTGDQAELLVGGERYRIARQWLEPLWNGQFSLLWQASFSRTLKQGMQGADVALLESKLAQVLGEPERPR EQFDKDLSRKVELFQRWQNMHVDGIAGRQTLRRLELLTQQQAPSLKEEG
Sequences:
>Translated_529_residues MYLNFFGFDELPFSIVPNARYLYLSQRHQEAIVHLQAGLGDGGGFAMLTGEVGTGKTTVARAILASLPGKTRAGMILNPT FSDLELLEAICDEFEVCYPKKATLKKLTQVLHEFLLAEHAQGIQVLLMIDEAQHLAPDVLEQLRLLTNLETESHKLLKVL LIGQPELQEKLRLPQLRQLAQRITGRYHLLPLNEEQTADYIRFRIEQASGNPELFNRKACQWIAEQTHGIPRLINLVCDA ALKQAYQAGEPTLSLARIKLACQEVMSFQSSVYQVASAKPPVPKLSYLSSALGGIALAVVLTWQLPPQLDRVMQHYFPLP EVVPPTEQRVFPQALRSALLNATSSEHALETLYAVWGYQASVLEQFCQTQADAVLWCEEQTGDWSTLQTYDLPAVLTLMM DDVPTYAVLYRLTGDQAELLVGGERYRIARQWLEPLWNGQFSLLWQASFSRTLKQGMQGADVALLESKLAQVLGEPERPR EQFDKDLSRKVELFQRWQNMHVDGIAGRQTLRRLELLTQQQAPSLKEEG >Mature_529_residues MYLNFFGFDELPFSIVPNARYLYLSQRHQEAIVHLQAGLGDGGGFAMLTGEVGTGKTTVARAILASLPGKTRAGMILNPT FSDLELLEAICDEFEVCYPKKATLKKLTQVLHEFLLAEHAQGIQVLLMIDEAQHLAPDVLEQLRLLTNLETESHKLLKVL LIGQPELQEKLRLPQLRQLAQRITGRYHLLPLNEEQTADYIRFRIEQASGNPELFNRKACQWIAEQTHGIPRLINLVCDA ALKQAYQAGEPTLSLARIKLACQEVMSFQSSVYQVASAKPPVPKLSYLSSALGGIALAVVLTWQLPPQLDRVMQHYFPLP EVVPPTEQRVFPQALRSALLNATSSEHALETLYAVWGYQASVLEQFCQTQADAVLWCEEQTGDWSTLQTYDLPAVLTLMM DDVPTYAVLYRLTGDQAELLVGGERYRIARQWLEPLWNGQFSLLWQASFSRTLKQGMQGADVALLESKLAQVLGEPERPR EQFDKDLSRKVELFQRWQNMHVDGIAGRQTLRRLELLTQQQAPSLKEEG
Specific function: Involved in a general secretion pathway (GSP) for the export of proteins [H]
COG id: COG3267
COG function: function code U; Type II secretory pathway, component ExeA (predicted ATPase)
Gene ontology:
Cell location: Cytoplasm. Cell membrane; Peripheral membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the exeA family [H]
Homologues:
Organism=Escherichia coli, GI1789720, Length=249, Percent_Identity=23.6947791164659, Blast_Score=82, Evalue=7e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003593 - InterPro: IPR003959 - InterPro: IPR002477 [H]
Pfam domain/function: PF00004 AAA; PF01471 PG_binding_1 [H]
EC number: NA
Molecular weight: Translated: 59613; Mature: 59613
Theoretical pI: Translated: 5.66; Mature: 5.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYLNFFGFDELPFSIVPNARYLYLSQRHQEAIVHLQAGLGDGGGFAMLTGEVGTGKTTVA CEEEECCCCCCCCEECCCCEEEEEHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCHHHHH RAILASLPGKTRAGMILNPTFSDLELLEAICDEFEVCYPKKATLKKLTQVLHEFLLAEHA HHHHHHCCCCCCCCEEECCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCC QGIQVLLMIDEAQHLAPDVLEQLRLLTNLETESHKLLKVLLIGQPELQEKLRLPQLRQLA CCCEEEEEECCHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHCCHHHHHHH QRITGRYHLLPLNEEQTADYIRFRIEQASGNPELFNRKACQWIAEQTHGIPRLINLVCDA HHHCCCEEEEECCCHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHH ALKQAYQAGEPTLSLARIKLACQEVMSFQSSVYQVASAKPPVPKLSYLSSALGGIALAVV HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH LTWQLPPQLDRVMQHYFPLPEVVPPTEQRVFPQALRSALLNATSSEHALETLYAVWGYQA HHCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHH SVLEQFCQTQADAVLWCEEQTGDWSTLQTYDLPAVLTLMMDDVPTYAVLYRLTGDQAELL HHHHHHHHCCCCEEEEEECCCCCCCCEECCCHHHHHHHHHHCCCHHHHHEEECCCCEEEE VGGERYRIARQWLEPLWNGQFSLLWQASFSRTLKQGMQGADVALLESKLAQVLGEPERPR ECCHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHH EQFDKDLSRKVELFQRWQNMHVDGIAGRQTLRRLELLTQQQAPSLKEEG HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MYLNFFGFDELPFSIVPNARYLYLSQRHQEAIVHLQAGLGDGGGFAMLTGEVGTGKTTVA CEEEECCCCCCCCEECCCCEEEEEHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCHHHHH RAILASLPGKTRAGMILNPTFSDLELLEAICDEFEVCYPKKATLKKLTQVLHEFLLAEHA HHHHHHCCCCCCCCEEECCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCC QGIQVLLMIDEAQHLAPDVLEQLRLLTNLETESHKLLKVLLIGQPELQEKLRLPQLRQLA CCCEEEEEECCHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHCCHHHHHHH QRITGRYHLLPLNEEQTADYIRFRIEQASGNPELFNRKACQWIAEQTHGIPRLINLVCDA HHHCCCEEEEECCCHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHH ALKQAYQAGEPTLSLARIKLACQEVMSFQSSVYQVASAKPPVPKLSYLSSALGGIALAVV HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH LTWQLPPQLDRVMQHYFPLPEVVPPTEQRVFPQALRSALLNATSSEHALETLYAVWGYQA HHCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHH SVLEQFCQTQADAVLWCEEQTGDWSTLQTYDLPAVLTLMMDDVPTYAVLYRLTGDQAELL HHHHHHHHCCCCEEEEEECCCCCCCCEECCCHHHHHHHHHHCCCHHHHHEEECCCCEEEE VGGERYRIARQWLEPLWNGQFSLLWQASFSRTLKQGMQGADVALLESKLAQVLGEPERPR ECCHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHH EQFDKDLSRKVELFQRWQNMHVDGIAGRQTLRRLELLTQQQAPSLKEEG HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7961440 [H]